BLASTX nr result

ID: Coptis24_contig00009722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009722
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]   204   4e-50
ref|XP_002273015.1| PREDICTED: uncharacterized protein LOC100246...   203   8e-50
ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arab...   201   4e-49
ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana] ...   201   4e-49
gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]      201   4e-49

>emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]
          Length = 542

 Score =  204 bits (520), Expect = 4e-50
 Identities = 108/157 (68%), Positives = 120/157 (76%)
 Frame = -1

Query: 702 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRXXXXXXXXXXXXXXXXX 523
           DGLVNVNSLFTIAVFVGLSLTTP Q SLE +  CDA I  A+R                 
Sbjct: 385 DGLVNVNSLFTIAVFVGLSLTTPNQHSLENRAGCDAGIDVARRLLVFEVVSFSFFLFSSL 444

Query: 522 VAQGLKLALNLLNSKDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRL 343
           +AQGLKLA+NLLNSKDVDE F+AHINL VL+FGML SA+GSV+GC+FLMLSMVNVIEIRL
Sbjct: 445 IAQGLKLAINLLNSKDVDEAFRAHINLKVLRFGMLGSAVGSVLGCLFLMLSMVNVIEIRL 504

Query: 342 GVLSCGSNSTIRAVATLITLVSAGLVTYISTVVYAFM 232
           G+LSCGS S + AVA L+ LVS  LV YIST VYAFM
Sbjct: 505 GLLSCGSRSAVHAVAALVVLVSTALVVYISTAVYAFM 541


>ref|XP_002273015.1| PREDICTED: uncharacterized protein LOC100246515 [Vitis vinifera]
           gi|359495402|ref|XP_003634982.1| PREDICTED:
           uncharacterized protein LOC100855266 [Vitis vinifera]
          Length = 194

 Score =  203 bits (517), Expect = 8e-50
 Identities = 107/157 (68%), Positives = 121/157 (77%)
 Frame = -1

Query: 702 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRXXXXXXXXXXXXXXXXX 523
           DGLVNVNSLFTIAVFVGLSLTTP Q SLE +  CDA I  A+R                 
Sbjct: 37  DGLVNVNSLFTIAVFVGLSLTTPNQHSLENRAGCDAGIDVARRLLVFEVVSFSFFLFSSL 96

Query: 522 VAQGLKLALNLLNSKDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRL 343
           +AQGLKLA+NLLNSKDVD+ F+AHINL VL+FGML SA+GSV+GC+FLMLSMVNVIEIRL
Sbjct: 97  IAQGLKLAINLLNSKDVDDAFRAHINLKVLRFGMLGSAVGSVLGCLFLMLSMVNVIEIRL 156

Query: 342 GVLSCGSNSTIRAVATLITLVSAGLVTYISTVVYAFM 232
           G+LSCGS S + AVA L+ LVS+ LV YIST VYAFM
Sbjct: 157 GLLSCGSRSAVHAVAALLVLVSSALVVYISTAVYAFM 193


>ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arabidopsis lyrata subsp.
           lyrata] gi|297330492|gb|EFH60911.1| hypothetical protein
           ARALYDRAFT_478070 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score =  201 bits (511), Expect = 4e-49
 Identities = 104/156 (66%), Positives = 124/156 (79%)
 Frame = -1

Query: 702 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRXXXXXXXXXXXXXXXXX 523
           DGLVNVNSLFTIAVFVGLSL TPGQ SLE++  CDA    AK+                 
Sbjct: 32  DGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSL 91

Query: 522 VAQGLKLALNLLNSKDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRL 343
           VAQGLKLALNLLNSKDV+E+F+AHIN+ VL++GM+ASA+GSV+GC+FLMLSMVNVI+IRL
Sbjct: 92  VAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRL 151

Query: 342 GVLSCGSNSTIRAVATLITLVSAGLVTYISTVVYAF 235
           G+LSCGS S  +AVATL+TLVS+ L+ YIST +YAF
Sbjct: 152 GLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187


>ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145331996|ref|NP_001078120.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|13877549|gb|AAK43852.1|AF370475_1 Unknown protein
           [Arabidopsis thaliana] gi|20148735|gb|AAM10258.1|
           unknown protein [Arabidopsis thaliana]
           gi|332641030|gb|AEE74551.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332641031|gb|AEE74552.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 189

 Score =  201 bits (511), Expect = 4e-49
 Identities = 104/156 (66%), Positives = 124/156 (79%)
 Frame = -1

Query: 702 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRXXXXXXXXXXXXXXXXX 523
           DGLVNVNSLFTIAVFVGLSL TPGQ SLE++  CDA    AK+                 
Sbjct: 32  DGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSL 91

Query: 522 VAQGLKLALNLLNSKDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRL 343
           VAQGLKLALNLLNSKDV+E+F+AHIN+ VL++GM+ASA+GSV+GC+FLMLSMVNVI+IRL
Sbjct: 92  VAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRL 151

Query: 342 GVLSCGSNSTIRAVATLITLVSAGLVTYISTVVYAF 235
           G+LSCGS S  +AVATL+TLVS+ L+ YIST +YAF
Sbjct: 152 GLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187


>gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]
          Length = 180

 Score =  201 bits (511), Expect = 4e-49
 Identities = 104/156 (66%), Positives = 124/156 (79%)
 Frame = -1

Query: 702 DGLVNVNSLFTIAVFVGLSLTTPGQKSLEEKDVCDADISHAKRXXXXXXXXXXXXXXXXX 523
           DGLVNVNSLFTIAVFVGLSL TPGQ SLE++  CDA    AK+                 
Sbjct: 23  DGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSL 82

Query: 522 VAQGLKLALNLLNSKDVDEVFKAHINLTVLKFGMLASAIGSVIGCIFLMLSMVNVIEIRL 343
           VAQGLKLALNLLNSKDV+E+F+AHIN+ VL++GM+ASA+GSV+GC+FLMLSMVNVI+IRL
Sbjct: 83  VAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRL 142

Query: 342 GVLSCGSNSTIRAVATLITLVSAGLVTYISTVVYAF 235
           G+LSCGS S  +AVATL+TLVS+ L+ YIST +YAF
Sbjct: 143 GLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 178


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