BLASTX nr result

ID: Coptis24_contig00009716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009716
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-49
ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...   187   1e-49
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig...   187   1e-49
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-48
ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein lig...   187   6e-48

>ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  182 bits (463), Expect(2) = 1e-49
 Identities = 83/127 (65%), Positives = 102/127 (80%)
 Frame = -2

Query: 573 IESHICLFSGWLRELYGPGFLEALASQWLSKKIWVVVIPCGSRNLAKPLKLELAIYPSAQ 394
           IESHICLFSGWLRE YGPGFLE LA + +S+ +WVVV+P GSRN  +P KLELAIY   Q
Sbjct: 128 IESHICLFSGWLREFYGPGFLEVLAPRLVSRDVWVVVLPTGSRNPRRPYKLELAIYSRLQ 187

Query: 393 DAQPRIVISLWKVKIEEPKFHHSDPTLIILNDQTKTRYKFASENEGDKQQLQWFYNACIG 214
           DAQPR +++LWK  +EE KFHHSDP+++I+++ TKT+ K A  NE DKQQLQWF +AC G
Sbjct: 188 DAQPRTIVALWKANLEEMKFHHSDPSVMIVDNSTKTQIKLAPANESDKQQLQWFCDACKG 247

Query: 213 IPQVMNP 193
           I QVM+P
Sbjct: 248 IQQVMHP 254



 Score = 39.7 bits (91), Expect(2) = 1e-49
 Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = -3

Query: 125 QVMNP-SLPHNNTASLIPATAPSSATEDVELAMAISASIHSA 3
           QVM+P +  HN+ A  + ATAP SA ED+E+AMA++A I SA
Sbjct: 250 QVMHPPAFLHNSQAPAVQATAPPSA-EDIEIAMAMNAYIQSA 290


>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score =  187 bits (474), Expect(2) = 1e-49
 Identities = 83/129 (64%), Positives = 104/129 (80%)
 Frame = -2

Query: 576 TIESHICLFSGWLRELYGPGFLEALASQWLSKKIWVVVIPCGSRNLAKPLKLELAIYPSA 397
           TIESHICLFSGWLRE YGPGFLE LA Q +S+K+W V++PCG+RNL+KP KLELAIY S 
Sbjct: 127 TIESHICLFSGWLREFYGPGFLELLAPQLVSRKVWAVILPCGARNLSKPFKLELAIYTSL 186

Query: 396 QDAQPRIVISLWKVKIEEPKFHHSDPTLIILNDQTKTRYKFASENEGDKQQLQWFYNACI 217
           QDAQPR V+ LWK  +++ K  HSDP+++I+++  KTR K AS NE DK+QLQWF NAC 
Sbjct: 187 QDAQPRTVVQLWKADLDQSKLQHSDPSVMIVDNAAKTRLKLASGNENDKEQLQWFCNACK 246

Query: 216 GIPQVMNPS 190
           GI  +M+P+
Sbjct: 247 GITSMMHPT 255



 Score = 35.0 bits (79), Expect(2) = 1e-49
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = -3

Query: 122 VMNPSLPHNNTASLIPATAPSSATEDVELAMAISASIHS 6
           +M+P+    N    + ATAP  + EDVELAMAI+ASI S
Sbjct: 251 MMHPTFMSGNHGPGVSATAPPDS-EDVELAMAINASIQS 288


>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score =  187 bits (474), Expect(2) = 1e-49
 Identities = 83/129 (64%), Positives = 104/129 (80%)
 Frame = -2

Query: 576 TIESHICLFSGWLRELYGPGFLEALASQWLSKKIWVVVIPCGSRNLAKPLKLELAIYPSA 397
           TIESHICLFSGWLRE YGPGFLE LA Q +S+K+W V++PCG+RNL+KP KLELAIY S 
Sbjct: 127 TIESHICLFSGWLREFYGPGFLELLAPQLVSRKVWAVILPCGARNLSKPFKLELAIYTSL 186

Query: 396 QDAQPRIVISLWKVKIEEPKFHHSDPTLIILNDQTKTRYKFASENEGDKQQLQWFYNACI 217
           QDAQPR V+ LWK  +++ K  HSDP+++I+++  KTR K AS NE DK+QLQWF NAC 
Sbjct: 187 QDAQPRTVVQLWKADLDQSKLQHSDPSVMIVDNAAKTRLKLASGNENDKEQLQWFCNACK 246

Query: 216 GIPQVMNPS 190
           GI  +M+P+
Sbjct: 247 GITSMMHPT 255



 Score = 35.0 bits (79), Expect(2) = 1e-49
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = -3

Query: 122 VMNPSLPHNNTASLIPATAPSSATEDVELAMAISASIHS 6
           +M+P+    N    + ATAP  + EDVELAMAI+ASI S
Sbjct: 251 MMHPTFMSGNHGPGVSATAPPDS-EDVELAMAINASIQS 288


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  185 bits (470), Expect(2) = 3e-48
 Identities = 85/127 (66%), Positives = 102/127 (80%)
 Frame = -2

Query: 573 IESHICLFSGWLRELYGPGFLEALASQWLSKKIWVVVIPCGSRNLAKPLKLELAIYPSAQ 394
           IESHICLFSGWLRE YGPGFLE LA + +S+ IWVVV+P GSR+   P KLELAIY   Q
Sbjct: 128 IESHICLFSGWLREFYGPGFLEVLAPRLVSRNIWVVVLPTGSRSPRMPYKLELAIYSRLQ 187

Query: 393 DAQPRIVISLWKVKIEEPKFHHSDPTLIILNDQTKTRYKFASENEGDKQQLQWFYNACIG 214
           DAQP  +I+LWK  +E+PKFHH+DPT++I+++ TKTR K A  NE DKQQLQWF +AC G
Sbjct: 188 DAQPHTIIALWKANLEQPKFHHADPTVMIVDNSTKTRLKLAPANERDKQQLQWFCDACKG 247

Query: 213 IPQVMNP 193
           IPQVM+P
Sbjct: 248 IPQVMHP 254



 Score = 32.0 bits (71), Expect(2) = 3e-48
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = -3

Query: 125 QVMNPSLPHNNTASL-IPATAPSSATEDVELAMAISASIHSA 3
           QVM+P    + + +L + ATAP S  ED E+AMAI+ASI SA
Sbjct: 250 QVMHPPEFLSKSQNLAVQATAPPS-DEDPEIAMAINASIQSA 290


>ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Vitis
           vinifera] gi|302143289|emb|CBI21850.3| unnamed protein
           product [Vitis vinifera]
          Length = 497

 Score =  187 bits (476), Expect(2) = 6e-48
 Identities = 90/126 (71%), Positives = 102/126 (80%)
 Frame = -2

Query: 576 TIESHICLFSGWLRELYGPGFLEALASQWLSKKIWVVVIPCGSRNLAKPLKLELAIYPSA 397
           TIE+HICLFSGWLREL+GPGFL+ALA Q LS+KIWVV+IP G  N +KPL+LEL IY + 
Sbjct: 134 TIENHICLFSGWLRELHGPGFLKALAPQLLSRKIWVVIIPSGFNNPSKPLRLELVIYSNF 193

Query: 396 QDAQPRIVISLWKVKIEEPKFHHSDPTLIILNDQTKTRYKFASENEGDKQQLQWFYNACI 217
           QDAQP  VI+L  V IEEPKFH SDP LII +   KTRYK AS NEGDKQQL+W YNAC 
Sbjct: 194 QDAQPCTVIALGNVNIEEPKFHQSDPALIIFDKSNKTRYKLASANEGDKQQLRWLYNACR 253

Query: 216 GIPQVM 199
           GIPQV+
Sbjct: 254 GIPQVL 259



 Score = 28.9 bits (63), Expect(2) = 6e-48
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = -3

Query: 125 QVMNPSLPHNNTASLIPATAPSSATEDVELAMAISASIHSA 3
           QV+   + H+   S +PA+   +ATE  ELAMA+ ASI SA
Sbjct: 257 QVLPTPMLHDARPS-VPAS--QTATEAAELAMAVGASIQSA 294


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