BLASTX nr result
ID: Coptis24_contig00009711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009711
(832 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256... 95 2e-31
emb|CBI31409.3| unnamed protein product [Vitis vinifera] 95 2e-31
ref|XP_002315331.1| predicted protein [Populus trichocarpa] gi|2... 86 8e-28
ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208... 84 1e-26
ref|XP_004172849.1| PREDICTED: putative transcription elongation... 84 1e-26
>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
Length = 2667
Score = 94.7 bits (234), Expect(3) = 2e-31
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2
Query: 467 FQILKYDEVEGAEVLNVELHEIRNSTSDKTFSSMDRQIKTIYLNDTARVLEGSFTGKEGI 646
++ILK D EG V V LHE++N + F+++D+ +KTI +NDT +VLEG G++G+
Sbjct: 1453 YKILK-DGPEGPVVQTVVLHELKNPLFENKFTALDQHMKTISINDTLKVLEGPLKGRQGL 1511
Query: 647 VKCICKSTNFFYDECQLENGGYFCAKSQMCENI 745
VK I + F YDE + EN GYFC+KSQMCE I
Sbjct: 1512 VKKIYRGVIFLYDENETENNGYFCSKSQMCEKI 1544
Score = 62.0 bits (149), Expect(3) = 2e-31
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +3
Query: 228 EFKPYKKDASDVAEWLSHLYAEQRKKHLSECSNGAPKGSEGIPGSRNSRKGDQF*LHDLV 407
+F P + S EWLS LY E+++K ++ G KG GS S + F LHDLV
Sbjct: 1379 KFTPSSNEESVDLEWLSQLYGERKQKRTTKSDKGGEKGE----GSSGSSMVNSFELHDLV 1434
Query: 408 FFGPKDFGVIIGVE 449
FG KDFG++IG+E
Sbjct: 1435 CFGRKDFGIVIGME 1448
Score = 26.2 bits (56), Expect(3) = 2e-31
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +1
Query: 160 KEGYLYKKVSV----YVDVVPSTDEL 225
K+GYLYKKVS+ V PS +EL
Sbjct: 1352 KDGYLYKKVSIDSLSCWGVTPSEEEL 1377
>emb|CBI31409.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 94.7 bits (234), Expect(3) = 2e-31
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2
Query: 467 FQILKYDEVEGAEVLNVELHEIRNSTSDKTFSSMDRQIKTIYLNDTARVLEGSFTGKEGI 646
++ILK D EG V V LHE++N + F+++D+ +KTI +NDT +VLEG G++G+
Sbjct: 426 YKILK-DGPEGPVVQTVVLHELKNPLFENKFTALDQHMKTISINDTLKVLEGPLKGRQGL 484
Query: 647 VKCICKSTNFFYDECQLENGGYFCAKSQMCENI 745
VK I + F YDE + EN GYFC+KSQMCE I
Sbjct: 485 VKKIYRGVIFLYDENETENNGYFCSKSQMCEKI 517
Score = 62.0 bits (149), Expect(3) = 2e-31
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +3
Query: 228 EFKPYKKDASDVAEWLSHLYAEQRKKHLSECSNGAPKGSEGIPGSRNSRKGDQF*LHDLV 407
+F P + S EWLS LY E+++K ++ G KG GS S + F LHDLV
Sbjct: 352 KFTPSSNEESVDLEWLSQLYGERKQKRTTKSDKGGEKGE----GSSGSSMVNSFELHDLV 407
Query: 408 FFGPKDFGVIIGVE 449
FG KDFG++IG+E
Sbjct: 408 CFGRKDFGIVIGME 421
Score = 26.2 bits (56), Expect(3) = 2e-31
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +1
Query: 160 KEGYLYKKVSV----YVDVVPSTDEL 225
K+GYLYKKVS+ V PS +EL
Sbjct: 325 KDGYLYKKVSIDSLSCWGVTPSEEEL 350
>ref|XP_002315331.1| predicted protein [Populus trichocarpa] gi|222864371|gb|EEF01502.1|
predicted protein [Populus trichocarpa]
Length = 1697
Score = 85.5 bits (210), Expect(3) = 8e-28
Identities = 40/93 (43%), Positives = 64/93 (68%)
Frame = +2
Query: 467 FQILKYDEVEGAEVLNVELHEIRNSTSDKTFSSMDRQIKTIYLNDTARVLEGSFTGKEGI 646
++ILK+ +E +V+ V L +++N +D F+++D KTI +ND+ +VLEG ++GI
Sbjct: 414 YKILKHG-LEKPDVVTVALRDLKNGLTDMKFTALDHHKKTISVNDSVKVLEGPLKDRQGI 472
Query: 647 VKCICKSTNFFYDECQLENGGYFCAKSQMCENI 745
VK I + F YD+ + E+GGYFC+K+QMCE I
Sbjct: 473 VKQIYRGIIFIYDQNETEDGGYFCSKAQMCEKI 505
Score = 55.8 bits (133), Expect(3) = 8e-28
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 228 EFKPYKKDASDVAEWLSHLYAEQRKKHLSECSNGAPKGSEGIPGSRNSRKGDQF*LHDLV 407
+FKP + + S+ EWL+ +Y Q+KK + G KG + G +F L++LV
Sbjct: 342 KFKPSENNESENLEWLAQIYVGQKKKQVIGNEKGGDKGESSLSS------GQKFELYNLV 395
Query: 408 FFGPKDFGVIIGVE 449
FG KDFG+++G+E
Sbjct: 396 CFGRKDFGLVVGME 409
Score = 29.3 bits (64), Expect(3) = 8e-28
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 4/27 (14%)
Frame = +1
Query: 160 KEGYLYKKVSV----YVDVVPSTDELL 228
K+GYLYK+VS+ + V+PS +ELL
Sbjct: 315 KDGYLYKRVSIDSLSCMGVIPSEEELL 341
>ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208989 [Cucumis sativus]
Length = 1690
Score = 83.6 bits (205), Expect(3) = 1e-26
Identities = 41/93 (44%), Positives = 61/93 (65%)
Frame = +2
Query: 467 FQILKYDEVEGAEVLNVELHEIRNSTSDKTFSSMDRQIKTIYLNDTARVLEGSFTGKEGI 646
++ILK D +G+ V+NV+ E+++ D F++ D K I ++D +VLEGS K+GI
Sbjct: 433 YKILK-DSPDGSVVVNVQRKELKSGALDAKFTAADHNGKIISVSDNVKVLEGSLKDKQGI 491
Query: 647 VKCICKSTNFFYDECQLENGGYFCAKSQMCENI 745
VK + + T F YDE +++N GYFC KS MCE I
Sbjct: 492 VKHVYRHTLFVYDENEVDNDGYFCCKSNMCEKI 524
Score = 54.3 bits (129), Expect(3) = 1e-26
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +3
Query: 228 EFKPYKKDASDVAEWLSHLYAEQRKKH----LSECSNGAPKGSEGIPGSRNSRKGDQF*L 395
+FKP + + S+ EWLS LY E++KK +E G +GS G S S GD
Sbjct: 356 KFKPSESNESNDLEWLSQLYGEKKKKKKKVVTTEKGGGKGEGSSG--SSSTSSFGD---- 409
Query: 396 HDLVFFGPKDFGVIIGVETRE 458
H+LV FG KDFG+I+G ++
Sbjct: 410 HNLVCFGRKDFGMILGTSEKD 430
Score = 28.5 bits (62), Expect(3) = 1e-26
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 4/27 (14%)
Frame = +1
Query: 160 KEGYLYKKVSV----YVDVVPSTDELL 228
K+GYLYKK+S+ V+PS DELL
Sbjct: 329 KDGYLYKKISLDSLSCWGVMPSEDELL 355
>ref|XP_004172849.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like, partial [Cucumis sativus]
Length = 620
Score = 83.6 bits (205), Expect(3) = 1e-26
Identities = 41/93 (44%), Positives = 61/93 (65%)
Frame = +2
Query: 467 FQILKYDEVEGAEVLNVELHEIRNSTSDKTFSSMDRQIKTIYLNDTARVLEGSFTGKEGI 646
++ILK D +G+ V+NV+ E+++ D F++ D K I ++D +VLEGS K+GI
Sbjct: 373 YKILK-DSPDGSVVVNVQRKELKSGALDAKFTAADHNGKIISVSDNVKVLEGSLKDKQGI 431
Query: 647 VKCICKSTNFFYDECQLENGGYFCAKSQMCENI 745
VK + + T F YDE +++N GYFC KS MCE I
Sbjct: 432 VKHVYRHTLFVYDENEVDNDGYFCCKSNMCEKI 464
Score = 54.3 bits (129), Expect(3) = 1e-26
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +3
Query: 228 EFKPYKKDASDVAEWLSHLYAEQRKKH----LSECSNGAPKGSEGIPGSRNSRKGDQF*L 395
+FKP + + S+ EWLS LY E++KK +E G +GS G S S GD
Sbjct: 296 KFKPSESNESNDLEWLSQLYGEKKKKKKKVVTTEKGGGKGEGSSG--SSSTSSFGD---- 349
Query: 396 HDLVFFGPKDFGVIIGVETRE 458
H+LV FG KDFG+I+G ++
Sbjct: 350 HNLVCFGRKDFGMILGTSEKD 370
Score = 28.5 bits (62), Expect(3) = 1e-26
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 4/27 (14%)
Frame = +1
Query: 160 KEGYLYKKVSV----YVDVVPSTDELL 228
K+GYLYKK+S+ V+PS DELL
Sbjct: 269 KDGYLYKKISLDSLSCWGVMPSEDELL 295