BLASTX nr result
ID: Coptis24_contig00009709
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009709
(3273 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529195.1| DNA binding protein, putative [Ricinus commu... 363 1e-97
ref|XP_002272317.2| PREDICTED: uncharacterized protein LOC100265... 347 9e-93
ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cuc... 327 1e-86
ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|2... 327 1e-86
emb|CAN60340.1| hypothetical protein VITISV_031319 [Vitis vinifera] 296 9e-80
>ref|XP_002529195.1| DNA binding protein, putative [Ricinus communis]
gi|223531373|gb|EEF33209.1| DNA binding protein, putative
[Ricinus communis]
Length = 1374
Score = 363 bits (933), Expect = 1e-97
Identities = 224/514 (43%), Positives = 297/514 (57%), Gaps = 47/514 (9%)
Frame = -3
Query: 2104 DDYSVRKPMSYSTQLLSSHLSNALINEELKDPDNPNPMSKSLIGGSMNVCKTRALTFLQA 1925
DDY VRK +YS Q L LSN E+ KD + +SKS++GGSMNVCK R + F+ A
Sbjct: 705 DDYPVRKSNTYSPQNLMVCLSNLPNTEDSKDDASAGQLSKSIVGGSMNVCKMRIINFMLA 764
Query: 1924 ERRVQGNV-SIVPKARNRLVMSEKQNDGTVAMQYGDIDDNDFQLVEDHMPTLPNTYYADL 1748
+R VQGNV S VP+ R R++MSEK NDGTVAMQYG+ +D DF VE+++PTLPNT++ADL
Sbjct: 765 DRVVQGNVVSFVPRRRTRMIMSEKPNDGTVAMQYGEAEDGDFLSVEEYLPTLPNTHFADL 824
Query: 1747 LGAQFISLMIREGYQHTDDQVRPKPTA-SLASNTQSNASAVPSSGMTAEMQQ-YPETNTG 1574
L AQF SLMIREGY +D ++PKPT +++S++Q NA+ + + AE+QQ Y E +G
Sbjct: 825 LAAQFCSLMIREGYL-VEDNIQPKPTRMNVSSSSQPNAAGIAPNNSAAEVQQQYNEAVSG 883
Query: 1573 QASSAITTSVSSGNASLNTPQSHQTNSWMLPPGSSQALQMSQGFMPGTARPVTPQ----- 1409
QAS+ + + S GNA +N Q+ ++ MLPPG+ QAL MSQG + + P PQ
Sbjct: 884 QASNEVKPNFS-GNAPMNPSQNLLASARMLPPGNPQALPMSQGLLSAVSMPARPQLDPQP 942
Query: 1408 ----------QLDSXXXXXXXXXXXXXXXXXXXXQRPSLMSSASPLSHLNAIGQNSNVQL 1259
Q+ QRP ++ + LSHLN +GQNSN+QL
Sbjct: 943 QLQQQPQQPPQMQQQQPPQQQQNQHSLIQQQSQFQRPPMVLPS--LSHLNTLGQNSNMQL 1000
Query: 1258 GNHMVSKSSH----------------------SHSXXXXXXXXXXXXXXQRKMMMGLGPA 1145
G+HMV+K SH QRKMMMGLG A
Sbjct: 1001 GSHMVNKPSHLQLQLLQQQQQQQQLQPQQQQQQQQQQQQQQQQQQPQMQQRKMMMGLGTA 1060
Query: 1144 XXXXXXXXXXXXXXXXXXXXXXXGIR----PGISPSMGPISGIGNMGQNPMNPS---SIN 986
G R PGIS SM PISG+ N+GQN +N S ++
Sbjct: 1061 MGMGNMGNNMVGLGGLSNAMGIGGARAMGGPGISGSMAPISGMNNVGQNQINLSQTTNLP 1120
Query: 985 NVINQQLLSGNITHAQATFMASKFKSAQNRANMSRATQSGITGLTGTGQMHPGSAGFSML 806
NVI+Q +G +T QA ++ SK + AQNR +M A QSGI G++G QMHPGSAG SML
Sbjct: 1121 NVISQHFRAGQVTPQQAAYL-SKLRMAQNRTSMLGAPQSGIAGMSGARQMHPGSAGLSML 1179
Query: 805 GQTLNRSNINPLQRTNLAAMGPPKMIPGTNFFMN 704
GQ+LNR+N+NP+QR+ + MGPPK++ G N +MN
Sbjct: 1180 GQSLNRANMNPMQRSAMGPMGPPKLMAGMNLYMN 1213
Score = 74.7 bits (182), Expect = 2e-10
Identities = 47/92 (51%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = -3
Query: 538 SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXP--MSPRLSSGTLPPLNTT 365
SS LQAVVSS QVGSPS M MSP++SSG + ++
Sbjct: 1274 SSSLQAVVSSSQVGSPSTMGIPQLNQQQQPQQQPSPQQMSQRTPMSPQISSGAIHAMSAG 1333
Query: 364 NAGTGPPSPQLSSQTLGSVGSITSSSMELQGV 269
N P SPQLSSQTLGSVGSIT+S MELQGV
Sbjct: 1334 NPEACPASPQLSSQTLGSVGSITNSPMELQGV 1365
>ref|XP_002272317.2| PREDICTED: uncharacterized protein LOC100265246 [Vitis vinifera]
Length = 1359
Score = 347 bits (891), Expect = 9e-93
Identities = 222/505 (43%), Positives = 286/505 (56%), Gaps = 37/505 (7%)
Frame = -3
Query: 2107 VDDYSVRKPMSYSTQLLSSHLSNALINEELKDPDNPNPMSKSLIGGSMNVCKTRALTFLQ 1928
V+D V+KP ++S Q L LS A NE++KD P+SKSL GGSMNVCK R L F+Q
Sbjct: 697 VEDCPVKKP-TFSPQELLGRLSMASHNEDIKDDTCKMPLSKSLAGGSMNVCKLRVLNFVQ 755
Query: 1927 AERRVQGNV-SIVPKARNRLVMSEKQNDGTVAMQYGDIDDNDFQLVEDHMPTLPNTYYAD 1751
AER VQG+V S+VP+AR+ ++MSEK NDG+VA+ +GD+ D DF ED++ TLPNT++AD
Sbjct: 756 AERVVQGSVVSVVPRARSTMIMSEKANDGSVAVHHGDVVDGDFLSAEDYVSTLPNTHFAD 815
Query: 1750 LLGAQFISLMIREGYQHTDDQVRPKPT-ASLASNTQSNASAVPSSGMTAEMQQYPETNTG 1574
LL AQF SLM REGY +D+V+PKP +LAS+ QSNA + + AEMQQY ET +G
Sbjct: 816 LLAAQFCSLMNREGYHLMEDRVQPKPARMNLASSNQSNAPGISPNNSAAEMQQYSETASG 875
Query: 1573 QASSAITTSVSSGNASLNTPQSHQTNSWMLPPGSSQALQMSQGFMPGTARPVTPQQLD-- 1400
Q + + +SGN LN Q+ NS MLPPG++QALQ+SQG + G + P PQQL+
Sbjct: 876 QPHNEVAKPTNSGNTPLNASQNLLANSRMLPPGNAQALQISQGLLTGVSLPTRPQQLNPQ 935
Query: 1399 SXXXXXXXXXXXXXXXXXXXXQRPSLMSSASPLSHLNAIGQNSNVQLGNHMVSKSS---- 1232
QR SLM +PLSHL+A+GQNSN+QLGNHMV+K S
Sbjct: 936 PLQQPQQQNPQSLIQQQHSQFQRSSLMLPTNPLSHLSAMGQNSNMQLGNHMVNKPSATLQ 995
Query: 1231 -----------------------HSHSXXXXXXXXXXXXXXQRKMMMGLGPAXXXXXXXX 1121
QRKMMMGLG A
Sbjct: 996 LQMLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPMQRKMMMGLGTAVNMGNMGN 1055
Query: 1120 XXXXXXXXXXXXXXXGIR----PGISPSMGPISGIGNMGQNPMNPSSINNVINQQLLSGN 953
G R GIS MG IS +GN+GQN MN + ++V N +L
Sbjct: 1056 NIASLQGLGNVMGIGGARGMGSTGISAPMGSISSMGNVGQNAMNLNQASSVTN--MLGQQ 1113
Query: 952 ITHAQATFMASKFKSAQNRANMSRATQSGITGLTGTGQM--HPGSAGFSMLGQTLNRSNI 779
+ Q MA+K + N A + Q+GI G+TGT QM HPGS G SMLGQ L+R +
Sbjct: 1114 FRNPQLGTMAAKIRML-NPAILG-GRQAGIAGMTGTRQMHSHPGSTGLSMLGQNLHRP-M 1170
Query: 778 NPLQRTNLAAMGPPKMIPGTNFFMN 704
NP+QRT + MGPPK++ G N +MN
Sbjct: 1171 NPMQRTGMGPMGPPKLMTGMNLYMN 1195
Score = 70.1 bits (170), Expect = 4e-09
Identities = 48/109 (44%), Positives = 55/109 (50%), Gaps = 19/109 (17%)
Frame = -3
Query: 538 SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXP------------------ 413
+SPLQAVVS PQVGSPS M
Sbjct: 1242 TSPLQAVVSPPQVGSPSTMGIPQQLNQQPQQQQPQQQQASPQQMNQRTPMSPQQMNQRTP 1301
Query: 412 MSPR-LSSGTLPPLNTTNAGTGPPSPQLSSQTLGSVGSITSSSMELQGV 269
MSP+ +SSG + P+ T N P SPQLSSQTLGSVGSIT+S M+LQGV
Sbjct: 1302 MSPQQMSSGAVHPMGTGNPEACPASPQLSSQTLGSVGSITNSPMDLQGV 1350
>ref|XP_004155965.1| PREDICTED: uncharacterized LOC101212313 [Cucumis sativus]
Length = 1331
Score = 327 bits (839), Expect = 1e-86
Identities = 205/484 (42%), Positives = 272/484 (56%), Gaps = 17/484 (3%)
Frame = -3
Query: 2104 DDYSVRKPMSYSTQLLSSHLSNALINEELKDPDNPNPMSKSLIGGSMNVCKTRALTFLQA 1925
+DY +RK +YS +++ L+ + IN+ LKD MSKSLIGGS+N CK R LTF+
Sbjct: 702 NDYPIRKSSTYSAHNVATLLATSSINDGLKDDAGLRKMSKSLIGGSLNACKRRVLTFMLQ 761
Query: 1924 ERRVQGNVSIVPKARNRLVMSEKQNDGTVAMQYGDIDDNDFQLVEDHMPTLPNTYYADLL 1745
+R G S V + R+R+++SEK NDGTVA+ Y DIDD+ F +ED +PTLPNT ADLL
Sbjct: 762 DRTPPGMDSYVTRLRSRVILSEKPNDGTVAITYEDIDDSVFLAIEDCLPTLPNTLLADLL 821
Query: 1744 GAQFISLMIREGYQHTDDQVRPKPTA-SLASNTQSNASAVPSSGMTAEMQQYPETNTGQA 1568
Q SLM+ EGY +D ++ +PT + ++N Q+NA+ P AEMQ Y E Q
Sbjct: 822 AGQLSSLMVHEGYDLIEDIIQLRPTRINPSANNQTNAAGHPHINPAAEMQTYGEAFPSQT 881
Query: 1567 SSAITTSVSSGNASL-NTPQSHQTNSWMLPPGSSQALQMSQGFMPGTARPVTPQQLDSXX 1391
S+ + SGNASL N + N+ MLPPG+ QA+QMSQG + G + P PQQ+++
Sbjct: 882 SNEVPKPSGSGNASLLNASHNLLGNARMLPPGNPQAMQMSQGILAGVSLPARPQQVEAQA 941
Query: 1390 XXXXXXXXXXXXXXXXXXQRP-----------SLMSSASPLSHLNAIGQNSNVQLGNHMV 1244
Q+ +M +PLSHLNAIGQN NVQLG +MV
Sbjct: 942 SMQQQQQQQQPQPSQLQNQQSLTQPQHQQFQRQVMLGPNPLSHLNAIGQNPNVQLGTNMV 1001
Query: 1243 SKSSHSHSXXXXXXXXXXXXXXQRKMMMG-LGPAXXXXXXXXXXXXXXXXXXXXXXXGIR 1067
+KSS QRKMM+G +G G
Sbjct: 1002 NKSS-IPLHLLQQQQQQQQSQMQRKMMIGTVGMGNMNNNMLGNLGSSIGVGATRGIGG-- 1058
Query: 1066 PGISPSMGPISGIGNMGQNPMN---PSSINNVINQQLLSGNITHAQATFMASKFKSAQNR 896
G+ MG I +GN GQNPMN SS NN +NQQ +G +T AQA A KF+ AQNR
Sbjct: 1059 TGLQAPMGSIPAMGNAGQNPMNLTQASSFNNALNQQFRAGTLTPAQA--QAYKFRMAQNR 1116
Query: 895 ANMSRATQSGITGLTGTGQMHPGSAGFSMLGQTLNRSNINPLQRTNLAAMGPPKMIPGTN 716
+ A+QS ITG+ G QMHP S G SMLGQTLNR+++ P+QR + +MGPPK++ G N
Sbjct: 1117 GMLGAASQSAITGIPGARQMHPSSGGLSMLGQTLNRASLTPMQRA-VVSMGPPKLVTGMN 1175
Query: 715 FFMN 704
+MN
Sbjct: 1176 PYMN 1179
Score = 65.5 bits (158), Expect = 9e-08
Identities = 43/93 (46%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = -3
Query: 538 SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXP--MSPR-LSSGTLPPLNT 368
++PLQAVVS QVGSPS M MSP+ +SSGT+ L+
Sbjct: 1230 TTPLQAVVSPQQVGSPSTMGVQQLNQQQQQQQTASPQQMNQRTPMSPQQMSSGTIHALSA 1289
Query: 367 TNAGTGPPSPQLSSQTLGSVGSITSSSMELQGV 269
N P SPQLSSQTLGSV SI +S M++QGV
Sbjct: 1290 GNPEVCPASPQLSSQTLGSVSSIANSPMDMQGV 1322
>ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|222873307|gb|EEF10438.1|
predicted protein [Populus trichocarpa]
Length = 1341
Score = 327 bits (838), Expect = 1e-86
Identities = 209/516 (40%), Positives = 278/516 (53%), Gaps = 49/516 (9%)
Frame = -3
Query: 2107 VDDYSVRKPMSYSTQLLSSHLSNALINEELKDPDNPNPMSKSLIGGSMNVCKTRALTFLQ 1928
VDDYS+ KP +YS Q LS HLSN+ NEE KD N +SKSL GG+MN+CKTR + F+
Sbjct: 692 VDDYSITKPNTYSLQNLSEHLSNSANNEEFKDDSNARQLSKSLAGGNMNICKTRFMDFVL 751
Query: 1927 AERRVQGN-VSIVPKARNRLVMSEKQNDGTVAMQYGDIDDN--DFQLVEDHMPTLPNTYY 1757
ER +QGN +S V K RNR++MSEK NDGTV M YG+ D+ D ED++PTLPNT++
Sbjct: 752 PERVLQGNAISYVTKVRNRMIMSEKPNDGTVVMHYGEADEKPVDVLSAEDYLPTLPNTHF 811
Query: 1756 ADLLGAQFISLMIREGYQHTDDQVRPKPTA-SLASNTQSNASAVPSSGMTAEMQQYPETN 1580
ADLL QF SLM REGY + ++P+P ++AS++Q N S P + E++QY E
Sbjct: 812 ADLLATQFCSLMTREGYL-VEYHIQPRPVCINIASSSQPNVSGGPLNNSAIEVKQYNEAV 870
Query: 1579 TGQASSAITTSVSSGNASLNTPQSHQTNSWMLPPGSSQALQMSQGFMPGTARPVTPQQLD 1400
+ Q+ + I ++ GNAS+N+ + NS MLPPG+ QALQ+SQ + G + P QQLD
Sbjct: 871 SVQSLNDIKPTLG-GNASINSSHNLLANSRMLPPGNPQALQISQSLVSGVSMPARLQQLD 929
Query: 1399 ------------------SXXXXXXXXXXXXXXXXXXXXQRPSLMSSASPLSHLNAIGQN 1274
QR ++ ++PLS L AIG N
Sbjct: 930 PQHSLLQQHQQHQQQQQQQQQQLQQQNQHALIQQQNSQFQRSPMVLPSNPLSDLGAIGAN 989
Query: 1273 SNVQLGNHMVSKSS-------------------------HSHSXXXXXXXXXXXXXXQRK 1169
SN+QLG+HMV+K S QRK
Sbjct: 990 SNMQLGSHMVNKPSTLQLQQQLLQQQQQLQQLQQGQQQQGQQQSQQPLQQQQGPQMQQRK 1049
Query: 1168 MMMGLGPAXXXXXXXXXXXXXXXXXXXXXXXGIRPGISPSMGPISGIGNMGQNPMNPSSI 989
MMM +G GI PGIS M PI+G+ N QNP+N
Sbjct: 1050 MMMAMG-MGSMGNNMVGLGGLGNAMSIGGARGIGPGISGPMAPITGMSNASQNPINLGHT 1108
Query: 988 NNV--INQQLLSGNITHAQATFMASKFKSAQNRANMSRATQSGITGLTGTGQMHPGSAGF 815
N+ +NQQL +G++ A A + K NRA++ QSGI G++G QMHPGSAGF
Sbjct: 1109 QNINALNQQLRTGHMMPAAAQMV----KQRINRASVLGGAQSGIAGMSGARQMHPGSAGF 1164
Query: 814 SMLGQTLNRSNINPLQRTNLAAMGPPKMIPGTNFFM 707
SMLGQ LNR+N+N +QR+ + MGPPKM+ G N +M
Sbjct: 1165 SMLGQPLNRTNMNVIQRSPMGHMGPPKMMAGMNHYM 1200
Score = 77.8 bits (190), Expect = 2e-11
Identities = 46/90 (51%), Positives = 54/90 (60%)
Frame = -3
Query: 538 SSPLQAVVSSPQVGSPSAMAXXXXXXXXXXXXXXXXXXXXXPMSPRLSSGTLPPLNTTNA 359
+S LQAVV+ QVGSPS M PMSP+LSSG + +++ N
Sbjct: 1243 TSSLQAVVAPSQVGSPSTMGIPLLNQQTQQQPSPQQMSQRTPMSPQLSSGAIHAISSGNP 1302
Query: 358 GTGPPSPQLSSQTLGSVGSITSSSMELQGV 269
GP SPQLSSQTLGSVGSIT+S MELQ V
Sbjct: 1303 EAGPASPQLSSQTLGSVGSITNSPMELQAV 1332
>emb|CAN60340.1| hypothetical protein VITISV_031319 [Vitis vinifera]
Length = 2516
Score = 296 bits (757), Expect(2) = 9e-80
Identities = 187/422 (44%), Positives = 237/422 (56%), Gaps = 30/422 (7%)
Frame = -3
Query: 2107 VDDYSVRKPMSYSTQLLSSHLSNALINEELKDPDNPNPMSKSLIGGSMNVCKTRALTFLQ 1928
V+D V+KP ++S Q L LS A NE++KD P+SKSL GGSMNVCK R L F+Q
Sbjct: 1901 VEDCPVKKP-TFSPQELLGRLSMASHNEDIKDDTCKMPLSKSLAGGSMNVCKLRVLNFVQ 1959
Query: 1927 AERRVQGNV-SIVPKARNRLVMSEKQNDGTVAMQYGDIDDNDFQLVEDHMPTLPNTYYAD 1751
AER VQG+V S+VP+AR+ ++MSEK NDG+VA+ +GD+ D DF ED++ TLPNT++AD
Sbjct: 1960 AERVVQGSVVSVVPRARSTMIMSEKANDGSVAVHHGDVVDGDFLSAEDYVSTLPNTHFAD 2019
Query: 1750 LLGAQFISLMIREGYQHTDDQVRPKPT-ASLASNTQSNASAVPSSGMTAEMQQYPETNTG 1574
LL AQF SLM REGY +D+V+PKP +LAS+ QSNA + + AEMQQY ET +G
Sbjct: 2020 LLAAQFCSLMNREGYHLMEDRVQPKPARMNLASSNQSNAPGISPNNSAAEMQQYSETASG 2079
Query: 1573 QASSAITTSVSSGNASLNTPQSHQTNSWMLPPGSSQALQMSQGFMPGTARPVTPQQLD-- 1400
Q + + +SGN LN Q+ NS MLPPG++QALQ+SQG + G + P PQQL+
Sbjct: 2080 QPHNEVAKPTNSGNTPLNASQNLLANSRMLPPGNAQALQISQGLLTGVSLPTRPQQLNPQ 2139
Query: 1399 -SXXXXXXXXXXXXXXXXXXXXQRPSLMSSASPLSHLNAIGQNSNVQLGNHMVSKSS--- 1232
S QR SLM +PLSHL+A+GQNSN+QLGNHMV+K S
Sbjct: 2140 PSLQQPQQQNPQSLIQQQHSQFQRSSLMLPTNPLSHLSAMGQNSNMQLGNHMVNKPSATL 2199
Query: 1231 ---------------HSHSXXXXXXXXXXXXXXQRKMMMGLGPAXXXXXXXXXXXXXXXX 1097
QRKMMMGLG A
Sbjct: 2200 QLQMLQQQQQQQQQQQQQQQQQQQQQQQQQQPMQRKMMMGLGTAVNMGNMGNNIASLQGL 2259
Query: 1096 XXXXXXXGIR----PGISPSMGPISGIGNMGQNPMN---PSSINNVINQQLLSGNITHAQ 938
G R GIS MG IS +GN+GQN MN SS+ N++ QQ I H
Sbjct: 2260 GNVMGIGGARGMGSTGISAPMGSISSMGNVGQNAMNLNQASSVTNMLGQQCSESTIRHNG 2319
Query: 937 AT 932
T
Sbjct: 2320 GT 2321
Score = 30.8 bits (68), Expect(2) = 9e-80
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 860 WFNWNWADA--PWICWFFDARADPKPI*HQPIATDKPRSHGST*DDSGDKFLYEP 702
W + N DA P W F+A + P ++P A ++ ++G+ D GD+ L+EP
Sbjct: 2341 WHDRNQTDALTPRFYWSFNAGPESAPS-YEPNAENRNGANGTPKADDGDESLHEP 2394