BLASTX nr result

ID: Coptis24_contig00009708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009708
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161416.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   184   2e-65
ref|XP_004149619.1| PREDICTED: uncharacterized protein LOC101210...   184   3e-65
ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810...   180   1e-62
ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795...   177   1e-61
ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|...   171   6e-60

>ref|XP_004161416.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228417 [Cucumis sativus]
          Length = 544

 Score =  184 bits (468), Expect(2) = 2e-65
 Identities = 102/237 (43%), Positives = 140/237 (59%), Gaps = 4/237 (1%)
 Frame = +1

Query: 295 MVSLVLVCILLAGAWLGFWVVRKFVLTEDGSIDLSVSLFVVWSIRILSAVMITQSSLDPL 474
           + + +L  I L GAWLGFWVV KF+L EDGSI+ S SLFV WSIRIL++++I Q S+DPL
Sbjct: 323 LAAFLLAFIFLVGAWLGFWVVHKFILDEDGSINTSTSLFVTWSIRILASLLILQCSVDPL 382

Query: 475 LAAEALLTGILVLSILGXXXXXXXXXXXXXXVFSTTKNNHRNFQMQDSPSEYLYDESG-- 648
           LA   L+ GI+  S+L               +F + K   +   + D P  +L D     
Sbjct: 383 LATGVLICGIVASSMLXKIFKFRFLRRLFKNLFKSPKKIPKKSHISDMP--HLDDSDDEC 440

Query: 649 --RKSQRFGEPELLGYRTKQFTSTSCNSSAIGMNKIPPPRSADYDSYLSTYHNTPERKNF 822
             + +  + EP   G + K+F    C+S            S   D Y ST+H+T ER+NF
Sbjct: 441 TLKTTPLYKEPRFFGSQNKKFLLQPCHS------------SKHSDVYPSTFHSTSERRNF 488

Query: 823 SKEEWETFTRDSTRKALEELVSSPDFNKWAVRNAERITLAPPRNQGSEKRSRWLPWF 993
           SK+EWE FT+DST+KALE LVSSPDF+ W V  A+RI++  P++  +EKR +WL WF
Sbjct: 489 SKDEWEKFTKDSTKKALEGLVSSPDFSSWLVDRADRISIT-PQSIRAEKRRKWLHWF 544



 Score = 92.4 bits (228), Expect(2) = 2e-65
 Identities = 46/97 (47%), Positives = 61/97 (62%)
 Frame = +3

Query: 3   RVVFLLLGTILLAMAPRLSKSIVFYYSGAMTXXXXXXXXXXXFQGMKLLPTGRKNSLAIV 182
           R++FL+LG +L++ A  LSKS+VFYY   M            FQGMKLLPTGRK+SL I 
Sbjct: 227 RIIFLILGVLLMSSASILSKSLVFYYGSGMAIGILLIVLMILFQGMKLLPTGRKSSLVIF 286

Query: 183 IYSSFVGVGSFXXXXXXXXXXXXXVEIGISDDMYTPV 293
           +Y+S VG+GSF             +E+GIS+DMY P+
Sbjct: 287 LYASAVGLGSFFLRYISGLLYQILLEMGISEDMYNPL 323


>ref|XP_004149619.1| PREDICTED: uncharacterized protein LOC101210632 [Cucumis sativus]
          Length = 1058

 Score =  184 bits (467), Expect(2) = 3e-65
 Identities = 102/237 (43%), Positives = 140/237 (59%), Gaps = 4/237 (1%)
 Frame = +1

Query: 295  MVSLVLVCILLAGAWLGFWVVRKFVLTEDGSIDLSVSLFVVWSIRILSAVMITQSSLDPL 474
            + + +L  I L GAWLGFWVV KF+L EDGSI+ S SLFV WSIRIL++++I Q S+DPL
Sbjct: 837  LAAFLLAFIFLVGAWLGFWVVHKFILDEDGSINTSTSLFVTWSIRILASLLILQCSVDPL 896

Query: 475  LAAEALLTGILVLSILGXXXXXXXXXXXXXXVFSTTKNNHRNFQMQDSPSEYLYDESG-- 648
            LA   L+ GI+  S+L               +F + K   +   + D P  +L D     
Sbjct: 897  LATGVLICGIVASSMLRKIFKFRFLRRLFKNLFKSPKKIPKKSHISDMP--HLDDSDDEC 954

Query: 649  --RKSQRFGEPELLGYRTKQFTSTSCNSSAIGMNKIPPPRSADYDSYLSTYHNTPERKNF 822
              + +  + EP   G + K+F    C+S            S   D Y ST+H+T ER+NF
Sbjct: 955  TLKTTPLYKEPRFFGSQNKKFLLQPCHS------------SKHSDVYPSTFHSTSERRNF 1002

Query: 823  SKEEWETFTRDSTRKALEELVSSPDFNKWAVRNAERITLAPPRNQGSEKRSRWLPWF 993
            SK+EWE FT+DST+KALE LVSSPDF+ W V  A+RI++  P++  +EKR +WL WF
Sbjct: 1003 SKDEWEKFTKDSTKKALEGLVSSPDFSSWLVDRADRISIT-PQSIRAEKRRKWLHWF 1058



 Score = 92.4 bits (228), Expect(2) = 3e-65
 Identities = 46/97 (47%), Positives = 61/97 (62%)
 Frame = +3

Query: 3    RVVFLLLGTILLAMAPRLSKSIVFYYSGAMTXXXXXXXXXXXFQGMKLLPTGRKNSLAIV 182
            R++FL+LG +L++ A  LSKS+VFYY   M            FQGMKLLPTGRK+SL I 
Sbjct: 741  RIIFLILGVLLMSSASILSKSLVFYYGSGMAIGILLIVLMILFQGMKLLPTGRKSSLVIF 800

Query: 183  IYSSFVGVGSFXXXXXXXXXXXXXVEIGISDDMYTPV 293
            +Y+S VG+GSF             +E+GIS+DMY P+
Sbjct: 801  LYASAVGLGSFFLRYISGLLYQILLEMGISEDMYNPL 837



 Score =  106 bits (264), Expect(2) = 3e-30
 Identities = 77/218 (35%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
 Frame = +1

Query: 289 LYMVSLVLVCILLAGAWLGFWVVRKFVLTEDGSIDLSVSLFVV-WSIRILSAVMITQSSL 465
           L + + ++  IL  G WLGFWV  KFV  E+G I+ ++S FVV  SI+IL+  +I + SL
Sbjct: 343 LALATFLIAIILPIGTWLGFWVAHKFVDRENGLIEKNISHFVVSTSIQILATFLILKCSL 402

Query: 466 DPLLAAEALLTGILVLSILGXXXXXXXXXXXXXXVFSTTKNNHRNFQMQ--DSPSEYLYD 639
           DP+LA   L+ G +                      S   +N   FQ+    SP+E    
Sbjct: 403 DPILATGGLICGTMA---------------------SIMTSNIFKFQLNLLQSPNE---- 437

Query: 640 ESGRKSQRFGEPELLGYRTKQFTSTSCNSSAIGMNKIPPPRSADYDSYLSTYHNTPERKN 819
            S    +     +LL +R+  FT                    D D Y S +H+T ER+ 
Sbjct: 438 TSNHLVEYRLRTDLLQHRSS-FTH-------------------DDDVYPSMFHSTHERRK 477

Query: 820 FSKEEWETFTRDSTRKALEELVSSPDFNKWAVRNAERI 933
            SK+EWE  T+DST+KALEELVSS  F +W + NAE +
Sbjct: 478 ISKDEWERLTKDSTKKALEELVSSSGFTRWLLDNAETL 515



 Score = 53.1 bits (126), Expect(2) = 3e-30
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   RVVFLLLGTILLAMAPRLSKSIVFYYSGAMTXXXXXXXXXXXFQGMKLLPTGRKNSLAIV 182
           R++FL+LG +L++ A  LSK +VFY  G               Q MKLL    KNSL I 
Sbjct: 243 RIIFLILGVVLMSSASILSKLLVFYLGGGWLIRFLLLLLMILSQRMKLLSRRGKNSLQIF 302

Query: 183 IYS-SFVG-VGSFXXXXXXXXXXXXXVEIG--ISDDMYTPV 293
           +Y+ + VG +GSF             +E+G  IS DM+ P+
Sbjct: 303 LYAYASVGCLGSFFLHYVLDLLNQIVLEMGITISQDMFDPL 343


>ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810145 [Glycine max]
          Length = 491

 Score =  180 bits (457), Expect(2) = 1e-62
 Identities = 105/230 (45%), Positives = 138/230 (60%), Gaps = 2/230 (0%)
 Frame = +1

Query: 307 VLVCILLAGAWLGFWVVRKFVLTEDGSIDLSVSLFVVWSIRILSAVMITQSSLDPLLAAE 486
           +L  + +AGAWLGFWVV K VLTEDGS+D+S + FV W+IRIL+A+MI QSS+DPLL   
Sbjct: 267 LLTFVAIAGAWLGFWVVHKLVLTEDGSVDISTAQFVAWAIRILAAIMILQSSMDPLLGTL 326

Query: 487 ALLTGILVLSILGXXXXXXXXXXXXXXVFSTTKNNHRNFQMQD-SPSEYLYDESGRKSQR 663
           ALL G LV S+L               +F + K N R FQ+ D SP +  +DE   K Q 
Sbjct: 327 ALLCGSLV-SLLKKMHRLRFLRHLRRRLFKSPKKN-RRFQVPDSSPFDDSHDELMYKMQS 384

Query: 664 FGEPELLGYRTK-QFTSTSCNSSAIGMNKIPPPRSADYDSYLSTYHNTPERKNFSKEEWE 840
             +  L   + +   T + C S A G  + PP   +    Y S  HNTPERK +S  EW+
Sbjct: 385 KEDSPLFQTQLRGPPTLSPCKSPATGFTRTPP--KSQEALYPSIIHNTPERKKYSAAEWD 442

Query: 841 TFTRDSTRKALEELVSSPDFNKWAVRNAERITLAPPRNQGSEKRSRWLPW 990
            FT+ ST KALEELV+SPDF KW   NA+RI++ P  N  +++R  W+ W
Sbjct: 443 AFTKKSTEKALEELVTSPDFGKWLSTNADRISVTP--NSRTDRRHGWMLW 490



 Score = 87.8 bits (216), Expect(2) = 1e-62
 Identities = 45/97 (46%), Positives = 59/97 (60%)
 Frame = +3

Query: 3   RVVFLLLGTILLAMAPRLSKSIVFYYSGAMTXXXXXXXXXXXFQGMKLLPTGRKNSLAIV 182
           R+V L LG ILL++A  +S+S+ FYYS AM            +QGMKLLPTGRK+SLAI 
Sbjct: 167 RIVLLTLGIILLSLASFISQSLAFYYSSAMAIGIILVILIILYQGMKLLPTGRKSSLAIF 226

Query: 183 IYSSFVGVGSFXXXXXXXXXXXXXVEIGISDDMYTPV 293
           +YS+ VG G+F              E+GI +DMY P+
Sbjct: 227 LYSTAVGFGTFLLRYIPGLVRSVLTELGIDEDMYNPL 263


>ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795492 [Glycine max]
          Length = 491

 Score =  177 bits (448), Expect(2) = 1e-61
 Identities = 100/229 (43%), Positives = 133/229 (58%), Gaps = 1/229 (0%)
 Frame = +1

Query: 307 VLVCILLAGAWLGFWVVRKFVLTEDGSIDLSVSLFVVWSIRILSAVMITQSSLDPLLAAE 486
           +L  + +AGAWLGFWVV K VLTEDGS+D+S + FV W++RIL+AVMI QSS+DPLL   
Sbjct: 267 LLTFVAIAGAWLGFWVVHKLVLTEDGSVDISTAQFVAWAVRILAAVMILQSSMDPLLGTL 326

Query: 487 ALLTGILVLSILGXXXXXXXXXXXXXXVFSTTKNNHRNFQMQD-SPSEYLYDESGRKSQR 663
           ALL G  V S+L               +F + K N R  Q+ D SP +   DE   K Q 
Sbjct: 327 ALLCGSFV-SLLKKMHRLRFLRHLRRRLFKSPKKNRRRSQVPDSSPFDDSRDELMYKMQS 385

Query: 664 FGEPELLGYRTKQFTSTSCNSSAIGMNKIPPPRSADYDSYLSTYHNTPERKNFSKEEWET 843
             +  L   + +  T + C S   G  + PP   +    Y S  HNTPERK +S  EW+ 
Sbjct: 386 KEDSPLFRPQLRGPTLSPCKSPVTGFTRTPP--KSQEALYPSIIHNTPERKRYSAAEWDA 443

Query: 844 FTRDSTRKALEELVSSPDFNKWAVRNAERITLAPPRNQGSEKRSRWLPW 990
           FT+ ST  ALEELV+SPDF KW   NA+RI++ P  N  ++++  W+ W
Sbjct: 444 FTKKSTETALEELVASPDFGKWLSTNADRISVTP--NSRTDQQRGWMLW 490



 Score = 87.8 bits (216), Expect(2) = 1e-61
 Identities = 45/97 (46%), Positives = 59/97 (60%)
 Frame = +3

Query: 3   RVVFLLLGTILLAMAPRLSKSIVFYYSGAMTXXXXXXXXXXXFQGMKLLPTGRKNSLAIV 182
           R+V L LG ILL++A  +S+S+ FYYS AM            +QGMKLLPTGRK+SLAI 
Sbjct: 167 RIVLLTLGIILLSLASFISQSLAFYYSSAMAIGIILVILIIIYQGMKLLPTGRKSSLAIF 226

Query: 183 IYSSFVGVGSFXXXXXXXXXXXXXVEIGISDDMYTPV 293
           +YS+ VG G+F              E+GI +DMY P+
Sbjct: 227 LYSTAVGFGTFLLRYIPGLVRSLLTELGIDEDMYNPL 263


>ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|gb|AES94517.1| Profilin
           [Medicago truncatula]
          Length = 485

 Score =  171 bits (434), Expect(2) = 6e-60
 Identities = 98/228 (42%), Positives = 130/228 (57%), Gaps = 2/228 (0%)
 Frame = +1

Query: 307 VLVCILLAGAWLGFWVVRKFVLTEDGSIDLSVSLFVVWSIRILSAVMITQSSLDPLLAAE 486
           +L  + +AGAWLGFWVV+K VLTE+GS+D+S + FV W+IRIL+A+MI QSS+DPLL   
Sbjct: 264 LLTFVAIAGAWLGFWVVKKLVLTEEGSVDMSTAQFVAWAIRILAAIMILQSSMDPLLGTL 323

Query: 487 ALLTGILVLSILGXXXXXXXXXXXXXXVFSTTKNNHRNFQMQDSPSEYLYDE--SGRKSQ 660
           ALL G LV S+                  S  KN  R+     SP +Y  DE     +  
Sbjct: 324 ALLCGSLVPSLKRILRLRFLRRLRRRLFKSPEKNRRRSQVYNPSPFDYEDDEYIDNIEDS 383

Query: 661 RFGEPELLGYRTKQFTSTSCNSSAIGMNKIPPPRSADYDSYLSTYHNTPERKNFSKEEWE 840
               P++     K  + T C SS  G N+   P+    + Y S  H TPER+ +S  EW+
Sbjct: 384 TPNRPQV-----KSSSMTPCKSSERGFNR-SLPKMLTEELYPSIIHTTPERRKYSPAEWD 437

Query: 841 TFTRDSTRKALEELVSSPDFNKWAVRNAERITLAPPRNQGSEKRSRWL 984
            FT++ST KALEELV SPDF KW   NA+RI++ P  N  + +  RWL
Sbjct: 438 AFTKESTEKALEELVQSPDFGKWLSTNADRISVTP--NSETNRARRWL 483



 Score = 87.4 bits (215), Expect(2) = 6e-60
 Identities = 44/97 (45%), Positives = 59/97 (60%)
 Frame = +3

Query: 3   RVVFLLLGTILLAMAPRLSKSIVFYYSGAMTXXXXXXXXXXXFQGMKLLPTGRKNSLAIV 182
           R+V L+LG  L++ A  LS+S+ FYYS AM            +QGMKLLPTGRK+SLAI 
Sbjct: 164 RIVLLILGITLMSSAAFLSQSLTFYYSSAMAIGIILVILIILYQGMKLLPTGRKSSLAIF 223

Query: 183 IYSSFVGVGSFXXXXXXXXXXXXXVEIGISDDMYTPV 293
           +YSS +G+G+F              E+GI +DMY P+
Sbjct: 224 LYSSAIGLGTFLLRYIPGLVRSILTELGIDEDMYNPL 260


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