BLASTX nr result

ID: Coptis24_contig00009702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009702
         (2232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19274.3| unnamed protein product [Vitis vinifera]              317   7e-84
ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245...   317   9e-84
ref|XP_002514048.1| DNA binding protein, putative [Ricinus commu...   310   1e-81
ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|2...   285   3e-74
ref|XP_004152740.1| PREDICTED: uncharacterized protein LOC101206...   265   5e-68

>emb|CBI19274.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  317 bits (813), Expect = 7e-84
 Identities = 221/580 (38%), Positives = 295/580 (50%), Gaps = 19/580 (3%)
 Frame = -2

Query: 2162 MAETRKKNKISISEEDISLLLPKYSAATIITLLQEISKFLTDKKIDWNEIVKKTLTGITN 1983
            M + RKK   +ISEED+S LL +Y+   ++ LLQE+++ L D KIDWN +V KT TGI+N
Sbjct: 4    MPKMRKKG--TISEEDVSALLQRYTPTAVLALLQEVAQ-LPDVKIDWNALVNKTSTGISN 60

Query: 1982 AREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVKVXX 1803
            AREYQM+WRHLAY   LLE +++                AFP +S EA  EA ACVKV  
Sbjct: 61   AREYQMLWRHLAYGHALLEKLEDGAQPLDDDSDLEYDLEAFPSISTEASAEATACVKVLI 120

Query: 1802 XXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPE-PASTQGKNITIPVSVQRQSVP 1626
                       N ++VEAPLTINIP GQ+  A S+      S QG NITIPVSVQ+    
Sbjct: 121  ASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQKS--- 177

Query: 1625 TSTSIESLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGDRT 1446
                 E  + NGS +G LPAR+KRKPW+ +ED ELIAAVQKCGE NWANILKGDFKGDR+
Sbjct: 178  -----EGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRS 232

Query: 1445 ASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAACXX 1266
            ASQLSQRWTIIRK+  +LN GGA N    QL+EAQLA R A+S AL+MP+ +  +++   
Sbjct: 233  ASQLSQRWTIIRKKHKNLNVGGA-NSNGSQLSEAQLAARHAMSLALDMPVKNLTTSSSIA 291

Query: 1265 XXXXXXXXXXXXXXXXXPEDISPGSQIQQAPH-NKVTSNTTLKPKINVRKGP-------P 1110
                              E +   + I QA   ++    +TL    ++   P        
Sbjct: 292  GTNPNATSSNSAFPATPAEALPASTNISQAQQLSQQGPVSTLSQMGSLGSAPKSRATSKK 351

Query: 1109 VPLKSSLAPNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSVPGA 930
               KS+ +   M++ TA+                       A+HI PG  +LIK+SV G 
Sbjct: 352  TSAKSTFSSQSMLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSSVAGG 411

Query: 929  -----TSLAGSRPNVHYIRPGQALSS-ALYCSPRPSIQQPGSGQQDHGIPTRPQLVASSG 768
                  +  G+ PNVHY   G   +S + Y +  PS+ + GS +     P  P    +  
Sbjct: 412  ANPLPANHLGAHPNVHYKCAGPPTTSLSTYSAVAPSVSRTGSAK-----PAAPGGQLAPS 466

Query: 767  PLSTSSSNCLSQQVMPVSSSSAALSGVDEGKS--PNAIVASKEGPKSDV--EMKDVGAAN 600
            P +TS +    Q     +S +       E K+     +  S   PK+ V  +   V +  
Sbjct: 467  PSATSVNISSEQTNAATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNT 526

Query: 599  VPNEFGPGQTEFSNPEVLTENQTTPVESLNHSQKVGAGEN 480
               +    Q   SN EV+ EN+   V       K    EN
Sbjct: 527  ASEQVQEDQATLSNTEVVLENKKAMVSDTKCLLKTETAEN 566


>ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245507 [Vitis vinifera]
          Length = 606

 Score =  317 bits (812), Expect = 9e-84
 Identities = 220/572 (38%), Positives = 289/572 (50%), Gaps = 11/572 (1%)
 Frame = -2

Query: 2162 MAETRKKNKISISEEDISLLLPKYSAATIITLLQEISKFLTDKKIDWNEIVKKTLTGITN 1983
            M + RKK   +ISEED+S LL +Y+   ++ LLQE+++ L D KIDWN +V KT TGI+N
Sbjct: 4    MPKMRKKG--TISEEDVSALLQRYTPTAVLALLQEVAQ-LPDVKIDWNALVNKTSTGISN 60

Query: 1982 AREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVKVXX 1803
            AREYQM+WRHLAY   LLE +++                AFP +S EA  EA ACVKV  
Sbjct: 61   AREYQMLWRHLAYGHALLEKLEDGAQPLDDDSDLEYDLEAFPSISTEASAEATACVKVLI 120

Query: 1802 XXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPE-PASTQGKNITIPVSVQRQSVP 1626
                       N ++VEAPLTINIP GQ+  A S+      S QG NITIPVSVQ+    
Sbjct: 121  ASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQKS--- 177

Query: 1625 TSTSIESLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGDRT 1446
                 E  + NGS +G LPAR+KRKPW+ +ED ELIAAVQKCGE NWANILKGDFKGDR+
Sbjct: 178  -----EGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRS 232

Query: 1445 ASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAACXX 1266
            ASQLSQRWTIIRK+  +LN GGA N    QL+EAQLA R A+S AL+MP+ +  +     
Sbjct: 233  ASQLSQRWTIIRKKHKNLNVGGA-NSNGSQLSEAQLAARHAMSLALDMPVKNLTTT---- 287

Query: 1265 XXXXXXXXXXXXXXXXXPEDISPGSQIQQAPHNKVTSNTTLKPKINVRKGPPVPLKSSLA 1086
                                +S    +  AP ++ TS  T               KS+ +
Sbjct: 288  ----NISQAQQLSQQGPVSTLSQMGSLGSAPKSRATSKKT-------------SAKSTFS 330

Query: 1085 PNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSVPGA-----TSL 921
               M++ TA+                       A+HI PG  +LIK+SV G       + 
Sbjct: 331  SQSMLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSSVAGGANPLPANH 390

Query: 920  AGSRPNVHYIRPGQALSS-ALYCSPRPSIQQPGSGQQDHGIPTRPQLVASSGPLSTSSSN 744
             G+ PNVHY   G   +S + Y +  PS+ + GS +     P  P    +  P +TS + 
Sbjct: 391  LGAHPNVHYKCAGPPTTSLSTYSAVAPSVSRTGSAK-----PAAPGGQLAPSPSATSVNI 445

Query: 743  CLSQQVMPVSSSSAALSGVDEGKS--PNAIVASKEGPKSDV--EMKDVGAANVPNEFGPG 576
               Q     +S +       E K+     +  S   PK+ V  +   V +     +    
Sbjct: 446  SSEQTNAATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNTASEQVQED 505

Query: 575  QTEFSNPEVLTENQTTPVESLNHSQKVGAGEN 480
            Q   SN EV+ EN+   V       K    EN
Sbjct: 506  QATLSNTEVVLENKKAMVSDTKCLLKTETAEN 537


>ref|XP_002514048.1| DNA binding protein, putative [Ricinus communis]
            gi|223547134|gb|EEF48631.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 608

 Score =  310 bits (793), Expect = 1e-81
 Identities = 221/600 (36%), Positives = 309/600 (51%), Gaps = 14/600 (2%)
 Frame = -2

Query: 2162 MAETRKKN---KISISEEDISLLLPKYSAATIITLLQEISKFLTDKKIDWNEIVKKTLTG 1992
            M E  KK+   K  ISEEDIS LL +Y+A T++ LLQE+++F    KIDWN +VKKT TG
Sbjct: 1    MIEKSKKHNSRKGLISEEDISSLLQRYTANTVLALLQEVAQF-EGVKIDWNALVKKTTTG 59

Query: 1991 ITNAREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVK 1812
            I N REYQM+WRHLAY+ TL++N+D+                AFP VS EA  EAAACVK
Sbjct: 60   IKNVREYQMLWRHLAYKHTLIDNLDDGAQPLDDDSDLEYELEAFPDVSSEASAEAAACVK 119

Query: 1811 VXXXXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPEPASTQGKNITIPVSVQRQS 1632
            V             N A VEAPLTINIPNGQ+  A+S+N +PA+ +G NIT+PVS+Q+Q 
Sbjct: 120  VLIASGATSDSTHPNSATVEAPLTINIPNGQSARAISENSQPATMRGMNITVPVSIQKQP 179

Query: 1631 VPTSTSIESLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGD 1452
            +PT  S E  +GNG   G +P RRKRKPW+E EDLELIAAVQK GE NWANIL+ +F  D
Sbjct: 180  LPTVASTEVFDGNGLGNGNIPPRRKRKPWSEAEDLELIAAVQKYGEGNWANILRSEFTWD 239

Query: 1451 RTASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAAC 1272
            RTASQLSQRW IIRKR  + N    GN +  QL+E   A R A++ AL+ P+ +KF+   
Sbjct: 240  RTASQLSQRWAIIRKRHGNWNP--VGNTSGVQLSEEWRAARHAMNLALDPPVKNKFT--- 294

Query: 1271 XXXXXXXXXXXXXXXXXXXPEDISPGSQIQQAPHNKVTS-----NTTLKPKINVRKGPPV 1107
                                 + +P     Q P    +S      +  K +I V++    
Sbjct: 295  ----------------NNISGEATPAQHQSQRPFAAKSSPMVPLGSAPKSQIAVKR---- 334

Query: 1106 PLKSSLAPNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSVP-GA 930
            P K  L+ +P ++ TA+                       A+HI P  GS +K+++P GA
Sbjct: 335  PAKPDLSSDP-VRATAVAAGARIATQSDAASLLKAAQAKNAVHIMPTGGSSMKSALPGGA 393

Query: 929  TSLAGSRPNVHYIRPGQALSSALYCSPRPSIQQPGSGQQDHGIPTRPQLVASSGPLSTSS 750
            ++ + + PNVH      A S +      PS  +P +      IP+          +S ++
Sbjct: 394  SNHSEAHPNVH-TNDLAAGSRSTLPVVSPSAIRPAASSTVQHIPS----------ISDTA 442

Query: 749  SNCLSQQVMPVSSSSAALSGVDEGKSPNAIVASKEGPKSDVEMKDVGAANVPNEFGPGQT 570
             N  ++Q       +A L    + ++  AI    E  K + ++K+ GA    NE      
Sbjct: 443  KNISAKQF------NAELPARKDTETAGAIKILSEDAK-EQQVKEHGACVSGNELSKQVQ 495

Query: 569  E----FSNPEVLTENQTTPVESLNHSQKVGAGENKQLPGV-KPESSDELKTATCSTAMDV 405
            E    F N E   + Q    ES + + K+   ++  +  + KP    +   +   T + V
Sbjct: 496  EEKAAFPNREAECKTQLAVSESSSAASKLEMADSNMMDVLGKPAEGSQNSNSNIITCLSV 555


>ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|222844072|gb|EEE81619.1|
            predicted protein [Populus trichocarpa]
          Length = 677

 Score =  285 bits (730), Expect = 3e-74
 Identities = 199/497 (40%), Positives = 257/497 (51%), Gaps = 10/497 (2%)
 Frame = -2

Query: 2162 MAETRKKNKIS-ISEEDISLLLPKYSAATIITLLQEISKFLTDKKIDWNEIVKKTLTGIT 1986
            M E  KKNK   ISEED+S LL +Y+A T++ LLQE+++F    KIDWN +VKKT TGI+
Sbjct: 1    MIEKSKKNKKGVISEEDVSTLLQRYTATTLLALLQEVAQF-DGAKIDWNALVKKTSTGIS 59

Query: 1985 NAREYQMVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXA-FPPVSGEALVEAAACVKV 1809
            NAREYQM+WRHLAYR  L E  D+                  FP V+ EA  EAAACVKV
Sbjct: 60   NAREYQMLWRHLAYRHVLPEKFDDGAHPLDDDDSDLESELEAFPSVTSEASTEAAACVKV 119

Query: 1808 XXXXXXXXXXXXLNRAIVEAPLTINIPNGQACGAVSDNPEPASTQGKNITIPVSVQRQSV 1629
                         N   VEAPLTINIPNG++  A S+N +    +G NI +PVSVQ+ S+
Sbjct: 120  LIASGLPSDSTHPNNTTVEAPLTINIPNGRSLRATSENSQSDVMRGVNIRVPVSVQKLSL 179

Query: 1628 PTSTSI---ESLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFK 1458
            P   S    E  + NGS +G  P RRKRKPW+E ED+ELIAAVQK GE NWA+I++G+FK
Sbjct: 180  PAVMSCPASEVYDANGSGSGTFPPRRKRKPWSEAEDMELIAAVQKLGEGNWASIVRGEFK 239

Query: 1457 GDRTASQLSQRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSA 1278
            GDRTASQLSQRW IIRKR  +LN G   +   PQL+E Q A R AV  AL+ P     S 
Sbjct: 240  GDRTASQLSQRWAIIRKRHGNLNVGTVSSA--PQLSETQRAARDAVKMALD-PHPAAKSL 296

Query: 1277 ACXXXXXXXXXXXXXXXXXXXPEDISPGSQIQQAPHNKVTSNTTLKPKINVRKGPPVPLK 1098
                                   + SP +Q Q      +T ++++ P     K   +  K
Sbjct: 297  IASSAGTTSTKTPNNCASPTITAEASP-AQHQSQQRTMMTKSSSIWPVGPAAKSQVMLAK 355

Query: 1097 SS----LAPNPMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSVPGA 930
            +S    L+ +P ++  A+                       A+HI P   S IK+S+ G 
Sbjct: 356  ASEKSILSSDP-VRAAAVAAGARIATQSDAASLLKAAQAKNAVHIMPTGSSSIKSSMTGG 414

Query: 929  TSL-AGSRPNVHYIRPGQALSSALYCSPRPSIQQPGSGQQDHGIPTRPQLVASSGPLSTS 753
             S      PN  +I  G A +     + RP    P SG      P  P+  +    +  S
Sbjct: 415  ISTHLDVNPNTRFISSGMATAPT---TTRP----PASGP----CPGLPKATSPPPQMKAS 463

Query: 752  SSNCLSQQVMPVSSSSA 702
            SS     Q  PV+S +A
Sbjct: 464  SSTAQHTQSTPVTSFNA 480


>ref|XP_004152740.1| PREDICTED: uncharacterized protein LOC101206820 [Cucumis sativus]
          Length = 659

 Score =  265 bits (676), Expect = 5e-68
 Identities = 184/514 (35%), Positives = 260/514 (50%), Gaps = 4/514 (0%)
 Frame = -2

Query: 2147 KKNKISISEEDISLLLPKYSAATIITLLQEISKFLTDKKIDWNEIVKKTLTGITNAREYQ 1968
            K  K S++E+D S LL +YS  T++ LLQE+++   D KIDWN++VK T TGI+N REYQ
Sbjct: 2    KLKKQSVTEKDFSSLLRRYSPTTVLALLQEVAQ-APDAKIDWNDLVKNTSTGISNPREYQ 60

Query: 1967 MVWRHLAYRDTLLENVDNXXXXXXXXXXXXXXXXAFPPVSGEALVEAAACVKVXXXXXXX 1788
            M+WRHLAYR  LL+++++                 FP VS E L EAAAC KV       
Sbjct: 61   MLWRHLAYRHALLDDLEDEKAPLEDDSDLECDLEPFPSVSCETLTEAAACAKVFISSGSP 120

Query: 1787 XXXXXLNRAIVEAPLTINIPNGQACGAVSDNPEPA-STQGKNITIPVSVQRQSVPTSTSI 1611
                  N +I+EAPLTI++P     G   +N +PA S +G  IT+PVSVQRQ V    S 
Sbjct: 121  SDLNVPNSSIIEAPLTISLPRSYTDGVQFENVDPACSVKGAIITVPVSVQRQPVLAPPSA 180

Query: 1610 ESLEGNGSAAGCLPARRKRKPWTEEEDLELIAAVQKCGERNWANILKGDFKGDRTASQLS 1431
            E L  NG   G   +RRKRKPW+E EDLEL+AAV+KCGE NWANI++GDF  DRTASQLS
Sbjct: 181  EGLNTNGPTYGNNASRRKRKPWSEAEDLELMAAVKKCGEGNWANIIRGDFLSDRTASQLS 240

Query: 1430 QRWTIIRKRQASLNSGGAGNPANPQLTEAQLATRQAVSHALNMPMVDKFSAACXXXXXXX 1251
            QRW II+K+  +LN G   N A  QL+E QLA R A+S AL   +    +          
Sbjct: 241  QRWAIIKKKHGNLNVG--VNTAGTQLSEVQLAARHAMSVALGRHVGSLKARINGSASTST 298

Query: 1250 XXXXXXXXXXXXPEDISPGSQIQQAP-HNKVTS--NTTLKPKINVRKGPPVPLKSSLAPN 1080
                         E +    ++ Q+P H K +S  +++L  K  V     +  KSS   +
Sbjct: 299  IGNGSSLTTVATSEQVQ--DKLHQSPTHAKPSSIGSSSLTAKTQVTTSKKMVPKSSFDSD 356

Query: 1079 PMIQLTALXXXXXXXXXXXXXXXXXXXXXXXALHIRPGSGSLIKTSVPGATSLAGSRPNV 900
             +++  A+                       A+H        I   VP +T         
Sbjct: 357  CIVRAAAVAAGARIASPADAASLLKAAQSKNAIH--------IMAKVPASTKT------- 401

Query: 899  HYIRPGQALSSALYCSPRPSIQQPGSGQQDHGIPTRPQLVASSGPLSTSSSNCLSQQVMP 720
              + PG+  S   +    PSI+ P        +P+R   +  + P +   S+  + Q   
Sbjct: 402  --LTPGRGPS---HLEAHPSIKLPTLSTTPTVVPSRGGPLKITSPTTAKLSSVQTDQNTA 456

Query: 719  VSSSSAALSGVDEGKSPNAIVASKEGPKSDVEMK 618
            V+S++A+ +   +  +  A  AS +   S+ E+K
Sbjct: 457  VASATASTASATDQNTAVASTASADS-LSEKEIK 489


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