BLASTX nr result

ID: Coptis24_contig00009696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009696
         (2056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   760   0.0  
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   744   0.0  
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   742   0.0  
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu...   733   0.0  
gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]        723   0.0  

>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
            gi|147816412|emb|CAN77439.1| hypothetical protein
            VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  760 bits (1963), Expect = 0.0
 Identities = 398/513 (77%), Positives = 440/513 (85%), Gaps = 8/513 (1%)
 Frame = -2

Query: 1851 QFRIICKPKRT--FLFRRGGV--TRCEAVSD----NNNTRVSSLSALEQLKASGADRYTK 1696
            Q+RI CKP RT   L +RG    +RCE  SD     ++TR SS+SALEQLK S ADRYTK
Sbjct: 33   QYRIFCKPARTRRSLIQRGASLNSRCEVASDALVDTDSTRSSSVSALEQLKTSAADRYTK 92

Query: 1695 EKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIYVV 1516
            E+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELC LNHIEEA VLSTCNRMEIYVV
Sbjct: 93   ERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVV 152

Query: 1515 ALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQIL 1336
            ALS HRGV+E+TEWM+KTSG+P SEL HH F+L + DATQHLFEVSAGLDSLVLGEGQIL
Sbjct: 153  ALSQHRGVKEVTEWMSKTSGVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLVLGEGQIL 212

Query: 1335 AQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMKLP 1156
            AQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI           VELA+MKLP
Sbjct: 213  AQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLP 272

Query: 1155 QNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYKPL 976
            ++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V+VNR EERV AIREEM+D+EIIY+PL
Sbjct: 273  ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVIVNRGEERVAAIREEMKDVEIIYRPL 332

Query: 975  TEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCVSD 796
            TEMLACA E+DVVFTSTASET LF KE+V+ LP VG   G  RLFVDISVPRNVG+CVSD
Sbjct: 333  TEMLACAAEADVVFTSTASETPLFLKEHVKDLPAVGQDVGGLRLFVDISVPRNVGACVSD 392

Query: 795  VENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLRAL 616
            +E  RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTIKKLRA 
Sbjct: 393  LETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAY 452

Query: 615  VEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLSET 436
             E IR+ ELE+C SK+GDDI KKTR A++ LSRG++NK+LHGPMQHLRCDGSD   LSET
Sbjct: 453  AERIRVAELEKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSET 512

Query: 435  LENMHALNRMFSLETEASVLGQKVRAKVEQSQK 337
            LENMHALNRMFSLETE S+L QK+RAKVEQ+QK
Sbjct: 513  LENMHALNRMFSLETEISLLEQKIRAKVEQTQK 545


>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
            sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
            Full=Glutamyl-tRNA reductase 1, chloroplastic;
            Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
            glutamyl-tRNA reductase [Cucumis sativus]
          Length = 552

 Score =  744 bits (1921), Expect = 0.0
 Identities = 389/515 (75%), Positives = 436/515 (84%), Gaps = 15/515 (2%)
 Frame = -2

Query: 1836 CKPKRT--FLFRRGGVT-----RCEAVSDN--------NNTRVSSLSALEQLKASGADRY 1702
            CK  RT   LF+R GV+     +CE  S +        +  + S+LSALEQLK S  DRY
Sbjct: 38   CKSIRTRRILFQRTGVSSFTPFKCELASSDVLVQNDEIDPPKSSNLSALEQLKTSAVDRY 97

Query: 1701 TKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIY 1522
            TKE+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEA VLSTCNRMEIY
Sbjct: 98   TKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIY 157

Query: 1521 VVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQ 1342
            VVALS HRGV+E+TEWM+KTSGIP SE+  H F+L + DATQH+FEVSAGLDSLVLGEGQ
Sbjct: 158  VVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQ 217

Query: 1341 ILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMK 1162
            ILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI           VELA+MK
Sbjct: 218  ILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMK 277

Query: 1161 LPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYK 982
            LP+ S ATAR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREEM+D+EIIYK
Sbjct: 278  LPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYK 337

Query: 981  PLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCV 802
            PLTEML+C  E+DV+FTSTASE+LLFTKE V+ LPPVG   G  RLF+DISVPRNVG+C+
Sbjct: 338  PLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACI 397

Query: 801  SDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLR 622
            +++E+ RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTIKKLR
Sbjct: 398  NNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIKKLR 457

Query: 621  ALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLS 442
            A  E IR  ELE+C SK+GDDIPKKTR A++ LSRG++NK+LHGPMQHLRCDGSD   LS
Sbjct: 458  AYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLS 517

Query: 441  ETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 337
            ETLENMHALNRMFSLETE +VL QK+RAKVEQ+QK
Sbjct: 518  ETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552


>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
            chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  742 bits (1915), Expect = 0.0
 Identities = 388/515 (75%), Positives = 435/515 (84%), Gaps = 15/515 (2%)
 Frame = -2

Query: 1836 CKPKRT--FLFRRGGVT-----RCEAVSDN--------NNTRVSSLSALEQLKASGADRY 1702
            CK  RT   LF+R GV+     +CE  S +        +  + S+LSALEQLK S  DRY
Sbjct: 38   CKSIRTRRILFQRTGVSSFTPFKCELASSDVLVQNDEIDPPKSSNLSALEQLKTSAVDRY 97

Query: 1701 TKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIY 1522
            TKE+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEA VLSTCNRMEIY
Sbjct: 98   TKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIY 157

Query: 1521 VVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQ 1342
            VVALS HRGV+E+TEWM+KTSGIP SE+  H F+L + DATQH+FEVSAGLDSLVLGEGQ
Sbjct: 158  VVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQ 217

Query: 1341 ILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMK 1162
            ILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI           VELA+MK
Sbjct: 218  ILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMK 277

Query: 1161 LPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYK 982
            LP+ S ATAR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREEM+D+EIIYK
Sbjct: 278  LPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYK 337

Query: 981  PLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCV 802
            PLTEML+C  E+DV+FTSTASE+LLFTKE V+ LPPVG   G  RLF+DISVPRNVG+C+
Sbjct: 338  PLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACI 397

Query: 801  SDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLR 622
            +++E+ RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTI KLR
Sbjct: 398  NNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIXKLR 457

Query: 621  ALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLS 442
            A  E IR  ELE+C SK+GDDIPKKTR A++ LSRG++NK+LHGPMQHLRCDGSD   LS
Sbjct: 458  AYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLS 517

Query: 441  ETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 337
            ETLENMHALNRMFSLETE +VL QK+RAKVEQ+QK
Sbjct: 518  ETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552


>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
            communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
            reductase 1, chloroplast precursor, putative [Ricinus
            communis]
          Length = 565

 Score =  733 bits (1892), Expect = 0.0
 Identities = 385/522 (73%), Positives = 431/522 (82%), Gaps = 20/522 (3%)
 Frame = -2

Query: 1851 QFRIICKPKRT----------FLFRRGGVTRCEAVSDNNNT----------RVSSLSALE 1732
            + R+ CKP R            L +R GV RCE V+  ++           +VSSLSALE
Sbjct: 44   KIRVFCKPSRNNTNDNGKYRRVLAQRAGV-RCEVVASTDSAVETDSNIDPAKVSSLSALE 102

Query: 1731 QLKASGADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGV 1552
            QLK S ADRYTKE++SI+V+GLS+HT PVEMREKLAIPEAEWPRAIGELC LNHI+EA V
Sbjct: 103  QLKTSAADRYTKERASIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCSLNHIDEAAV 162

Query: 1551 LSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAG 1372
            LSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+  H F+L + DATQHLFEVSAG
Sbjct: 163  LSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICEHQFLLYNNDATQHLFEVSAG 222

Query: 1371 LDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXX 1192
            LDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAI+VGKRVRTETNI        
Sbjct: 223  LDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVS 282

Query: 1191 XXXVELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIRE 1012
               VELA+MKLP++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIRE
Sbjct: 283  SAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIRE 342

Query: 1011 EMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDI 832
            E++D+EIIYKPL EML CA E+DVVFTSTASET LF KENV+ LP V S  G  RLFVDI
Sbjct: 343  EIKDVEIIYKPLDEMLTCAAEADVVFTSTASETPLFLKENVKDLPSVSSEVGSLRLFVDI 402

Query: 831  SVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSL 652
            SVPRNVGSCV+DVE  RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSL
Sbjct: 403  SVPRNVGSCVNDVEKARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSL 462

Query: 651  ETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLR 472
            ETVPTIKKLRA  E IR+ EL++C SK+G++IPKKTR A++ LSRG++NK+LHGPMQHLR
Sbjct: 463  ETVPTIKKLRAYAERIRVAELDKCLSKMGEEIPKKTRRAVDDLSRGIVNKLLHGPMQHLR 522

Query: 471  CDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQ 346
            CDGSD   LSETLENMHALNRMFSLETE +VL QK+RAK  Q
Sbjct: 523  CDGSDSRTLSETLENMHALNRMFSLETEVAVLEQKLRAKTSQ 564


>gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]
          Length = 542

 Score =  723 bits (1867), Expect = 0.0
 Identities = 374/502 (74%), Positives = 424/502 (84%), Gaps = 5/502 (0%)
 Frame = -2

Query: 1836 CKPKRTFLFRRGGVTRCEAVSDNN-----NTRVSSLSALEQLKASGADRYTKEKSSIIVL 1672
            CK ++T +  + G  RCEA S ++       + +S+SALEQLK S ADRYTKE+SS++V+
Sbjct: 39   CKTRKTLVQSQRGPIRCEASSASDVVADATKKAASVSALEQLKTSAADRYTKERSSVMVI 98

Query: 1671 GLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGV 1492
            GLS+H+TPVEMREKLAIPEAEWPRAI ELC LNHIEEA VLSTCNRMEIYVVALS HRGV
Sbjct: 99   GLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSKHRGV 158

Query: 1491 RELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVK 1312
            +E+TEWM+KTSGIP ++L  H F+L + DATQHLFEVSAGLDSLVLGEGQILAQVKQVVK
Sbjct: 159  KEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVK 218

Query: 1311 SGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMKLPQNSSATAR 1132
             G+GVNGFGRNISGLFKHAITVGKRVRTETNI           VELA+MKLP+ S A AR
Sbjct: 219  VGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHANAR 278

Query: 1131 VLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYKPLTEMLACAG 952
            +LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREE++D+EIIYKPL+EML C G
Sbjct: 279  MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLSEMLTCIG 338

Query: 951  ESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCVSDVENTRVYN 772
            E+DVVFTSTASE  LF K++V+ LPP     G  RLFVDISVPRNVGSC+SD+E+ RVYN
Sbjct: 339  EADVVFTSTASENPLFLKDDVKELPPATDEVGGRRLFVDISVPRNVGSCLSDLESVRVYN 398

Query: 771  VDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLRALVEGIRMTE 592
            VDDLKEVVAANKEDR RKAMEAQ II EESKQF AWRDSLETVPTIKKLRA  E IR+ E
Sbjct: 399  VDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPTIKKLRAYAERIRLAE 458

Query: 591  LERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLSETLENMHALN 412
            LE+C  K+GDDI KKT+ A++ LSRG++NK+LHGPMQHLRCDGSD   LSETLENMHALN
Sbjct: 459  LEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN 518

Query: 411  RMFSLETEASVLGQKVRAKVEQ 346
            RMF+LETE SVL QK+RAKVEQ
Sbjct: 519  RMFNLETEISVLEQKIRAKVEQ 540


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