BLASTX nr result
ID: Coptis24_contig00009696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009696
(2056 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 760 0.0
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 744 0.0
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN... 742 0.0
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu... 733 0.0
gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max] 723 0.0
>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
gi|147816412|emb|CAN77439.1| hypothetical protein
VITISV_007402 [Vitis vinifera]
Length = 545
Score = 760 bits (1963), Expect = 0.0
Identities = 398/513 (77%), Positives = 440/513 (85%), Gaps = 8/513 (1%)
Frame = -2
Query: 1851 QFRIICKPKRT--FLFRRGGV--TRCEAVSD----NNNTRVSSLSALEQLKASGADRYTK 1696
Q+RI CKP RT L +RG +RCE SD ++TR SS+SALEQLK S ADRYTK
Sbjct: 33 QYRIFCKPARTRRSLIQRGASLNSRCEVASDALVDTDSTRSSSVSALEQLKTSAADRYTK 92
Query: 1695 EKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIYVV 1516
E+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELC LNHIEEA VLSTCNRMEIYVV
Sbjct: 93 ERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVV 152
Query: 1515 ALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQIL 1336
ALS HRGV+E+TEWM+KTSG+P SEL HH F+L + DATQHLFEVSAGLDSLVLGEGQIL
Sbjct: 153 ALSQHRGVKEVTEWMSKTSGVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLVLGEGQIL 212
Query: 1335 AQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMKLP 1156
AQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI VELA+MKLP
Sbjct: 213 AQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLP 272
Query: 1155 QNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYKPL 976
++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V+VNR EERV AIREEM+D+EIIY+PL
Sbjct: 273 ESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVIVNRGEERVAAIREEMKDVEIIYRPL 332
Query: 975 TEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCVSD 796
TEMLACA E+DVVFTSTASET LF KE+V+ LP VG G RLFVDISVPRNVG+CVSD
Sbjct: 333 TEMLACAAEADVVFTSTASETPLFLKEHVKDLPAVGQDVGGLRLFVDISVPRNVGACVSD 392
Query: 795 VENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLRAL 616
+E RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTIKKLRA
Sbjct: 393 LETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAY 452
Query: 615 VEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLSET 436
E IR+ ELE+C SK+GDDI KKTR A++ LSRG++NK+LHGPMQHLRCDGSD LSET
Sbjct: 453 AERIRVAELEKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSET 512
Query: 435 LENMHALNRMFSLETEASVLGQKVRAKVEQSQK 337
LENMHALNRMFSLETE S+L QK+RAKVEQ+QK
Sbjct: 513 LENMHALNRMFSLETEISLLEQKIRAKVEQTQK 545
>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
Full=Glutamyl-tRNA reductase 1, chloroplastic;
Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
glutamyl-tRNA reductase [Cucumis sativus]
Length = 552
Score = 744 bits (1921), Expect = 0.0
Identities = 389/515 (75%), Positives = 436/515 (84%), Gaps = 15/515 (2%)
Frame = -2
Query: 1836 CKPKRT--FLFRRGGVT-----RCEAVSDN--------NNTRVSSLSALEQLKASGADRY 1702
CK RT LF+R GV+ +CE S + + + S+LSALEQLK S DRY
Sbjct: 38 CKSIRTRRILFQRTGVSSFTPFKCELASSDVLVQNDEIDPPKSSNLSALEQLKTSAVDRY 97
Query: 1701 TKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIY 1522
TKE+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEA VLSTCNRMEIY
Sbjct: 98 TKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIY 157
Query: 1521 VVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQ 1342
VVALS HRGV+E+TEWM+KTSGIP SE+ H F+L + DATQH+FEVSAGLDSLVLGEGQ
Sbjct: 158 VVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQ 217
Query: 1341 ILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMK 1162
ILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI VELA+MK
Sbjct: 218 ILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMK 277
Query: 1161 LPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYK 982
LP+ S ATAR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREEM+D+EIIYK
Sbjct: 278 LPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYK 337
Query: 981 PLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCV 802
PLTEML+C E+DV+FTSTASE+LLFTKE V+ LPPVG G RLF+DISVPRNVG+C+
Sbjct: 338 PLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACI 397
Query: 801 SDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLR 622
+++E+ RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTIKKLR
Sbjct: 398 NNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIKKLR 457
Query: 621 ALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLS 442
A E IR ELE+C SK+GDDIPKKTR A++ LSRG++NK+LHGPMQHLRCDGSD LS
Sbjct: 458 AYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLS 517
Query: 441 ETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 337
ETLENMHALNRMFSLETE +VL QK+RAKVEQ+QK
Sbjct: 518 ETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552
>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
chloroplastic-like [Cucumis sativus]
Length = 552
Score = 742 bits (1915), Expect = 0.0
Identities = 388/515 (75%), Positives = 435/515 (84%), Gaps = 15/515 (2%)
Frame = -2
Query: 1836 CKPKRT--FLFRRGGVT-----RCEAVSDN--------NNTRVSSLSALEQLKASGADRY 1702
CK RT LF+R GV+ +CE S + + + S+LSALEQLK S DRY
Sbjct: 38 CKSIRTRRILFQRTGVSSFTPFKCELASSDVLVQNDEIDPPKSSNLSALEQLKTSAVDRY 97
Query: 1701 TKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIY 1522
TKE+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEA VLSTCNRMEIY
Sbjct: 98 TKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIY 157
Query: 1521 VVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQ 1342
VVALS HRGV+E+TEWM+KTSGIP SE+ H F+L + DATQH+FEVSAGLDSLVLGEGQ
Sbjct: 158 VVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGLDSLVLGEGQ 217
Query: 1341 ILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMK 1162
ILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI VELA+MK
Sbjct: 218 ILAQVKQVVKVGQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMK 277
Query: 1161 LPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYK 982
LP+ S ATAR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREEM+D+EIIYK
Sbjct: 278 LPEPSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYK 337
Query: 981 PLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCV 802
PLTEML+C E+DV+FTSTASE+LLFTKE V+ LPPVG G RLF+DISVPRNVG+C+
Sbjct: 338 PLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPPVGHDVGGLRLFIDISVPRNVGACI 397
Query: 801 SDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLR 622
+++E+ RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTI KLR
Sbjct: 398 NNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIXKLR 457
Query: 621 ALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLS 442
A E IR ELE+C SK+GDDIPKKTR A++ LSRG++NK+LHGPMQHLRCDGSD LS
Sbjct: 458 AYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLS 517
Query: 441 ETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 337
ETLENMHALNRMFSLETE +VL QK+RAKVEQ+QK
Sbjct: 518 ETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552
>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
reductase 1, chloroplast precursor, putative [Ricinus
communis]
Length = 565
Score = 733 bits (1892), Expect = 0.0
Identities = 385/522 (73%), Positives = 431/522 (82%), Gaps = 20/522 (3%)
Frame = -2
Query: 1851 QFRIICKPKRT----------FLFRRGGVTRCEAVSDNNNT----------RVSSLSALE 1732
+ R+ CKP R L +R GV RCE V+ ++ +VSSLSALE
Sbjct: 44 KIRVFCKPSRNNTNDNGKYRRVLAQRAGV-RCEVVASTDSAVETDSNIDPAKVSSLSALE 102
Query: 1731 QLKASGADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGV 1552
QLK S ADRYTKE++SI+V+GLS+HT PVEMREKLAIPEAEWPRAIGELC LNHI+EA V
Sbjct: 103 QLKTSAADRYTKERASIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCSLNHIDEAAV 162
Query: 1551 LSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAG 1372
LSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+ H F+L + DATQHLFEVSAG
Sbjct: 163 LSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICEHQFLLYNNDATQHLFEVSAG 222
Query: 1371 LDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXX 1192
LDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAI+VGKRVRTETNI
Sbjct: 223 LDSLVLGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVS 282
Query: 1191 XXXVELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIRE 1012
VELA+MKLP++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIRE
Sbjct: 283 SAAVELALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIRE 342
Query: 1011 EMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDI 832
E++D+EIIYKPL EML CA E+DVVFTSTASET LF KENV+ LP V S G RLFVDI
Sbjct: 343 EIKDVEIIYKPLDEMLTCAAEADVVFTSTASETPLFLKENVKDLPSVSSEVGSLRLFVDI 402
Query: 831 SVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSL 652
SVPRNVGSCV+DVE RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSL
Sbjct: 403 SVPRNVGSCVNDVEKARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSL 462
Query: 651 ETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLR 472
ETVPTIKKLRA E IR+ EL++C SK+G++IPKKTR A++ LSRG++NK+LHGPMQHLR
Sbjct: 463 ETVPTIKKLRAYAERIRVAELDKCLSKMGEEIPKKTRRAVDDLSRGIVNKLLHGPMQHLR 522
Query: 471 CDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQ 346
CDGSD LSETLENMHALNRMFSLETE +VL QK+RAK Q
Sbjct: 523 CDGSDSRTLSETLENMHALNRMFSLETEVAVLEQKLRAKTSQ 564
>gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]
Length = 542
Score = 723 bits (1867), Expect = 0.0
Identities = 374/502 (74%), Positives = 424/502 (84%), Gaps = 5/502 (0%)
Frame = -2
Query: 1836 CKPKRTFLFRRGGVTRCEAVSDNN-----NTRVSSLSALEQLKASGADRYTKEKSSIIVL 1672
CK ++T + + G RCEA S ++ + +S+SALEQLK S ADRYTKE+SS++V+
Sbjct: 39 CKTRKTLVQSQRGPIRCEASSASDVVADATKKAASVSALEQLKTSAADRYTKERSSVMVI 98
Query: 1671 GLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGV 1492
GLS+H+TPVEMREKLAIPEAEWPRAI ELC LNHIEEA VLSTCNRMEIYVVALS HRGV
Sbjct: 99 GLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSKHRGV 158
Query: 1491 RELTEWMAKTSGIPASELRHHLFMLRDGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVK 1312
+E+TEWM+KTSGIP ++L H F+L + DATQHLFEVSAGLDSLVLGEGQILAQVKQVVK
Sbjct: 159 KEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVK 218
Query: 1311 SGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMKLPQNSSATAR 1132
G+GVNGFGRNISGLFKHAITVGKRVRTETNI VELA+MKLP+ S A AR
Sbjct: 219 VGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHANAR 278
Query: 1131 VLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYKPLTEMLACAG 952
+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREE++D+EIIYKPL+EML C G
Sbjct: 279 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLSEMLTCIG 338
Query: 951 ESDVVFTSTASETLLFTKENVETLPPVGSINGVSRLFVDISVPRNVGSCVSDVENTRVYN 772
E+DVVFTSTASE LF K++V+ LPP G RLFVDISVPRNVGSC+SD+E+ RVYN
Sbjct: 339 EADVVFTSTASENPLFLKDDVKELPPATDEVGGRRLFVDISVPRNVGSCLSDLESVRVYN 398
Query: 771 VDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLRALVEGIRMTE 592
VDDLKEVVAANKEDR RKAMEAQ II EESKQF AWRDSLETVPTIKKLRA E IR+ E
Sbjct: 399 VDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPTIKKLRAYAERIRLAE 458
Query: 591 LERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLSETLENMHALN 412
LE+C K+GDDI KKT+ A++ LSRG++NK+LHGPMQHLRCDGSD LSETLENMHALN
Sbjct: 459 LEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN 518
Query: 411 RMFSLETEASVLGQKVRAKVEQ 346
RMF+LETE SVL QK+RAKVEQ
Sbjct: 519 RMFNLETEISVLEQKIRAKVEQ 540