BLASTX nr result

ID: Coptis24_contig00009676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009676
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619681.1| Mitochondrial metalloendopeptidase OMA1 [Med...    62   6e-08
ref|XP_002318862.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003534034.1| PREDICTED: uncharacterized protein LOC100799...    59   3e-07
ref|XP_004160882.1| PREDICTED: uncharacterized LOC101206881 [Cuc...    58   7e-07
ref|XP_004148121.1| PREDICTED: uncharacterized protein LOC101206...    58   7e-07

>ref|XP_003619681.1| Mitochondrial metalloendopeptidase OMA1 [Medicago truncatula]
           gi|355494696|gb|AES75899.1| Mitochondrial
           metalloendopeptidase OMA1 [Medicago truncatula]
          Length = 313

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
 Frame = +3

Query: 9   LLDEKDPHSVRAKLILKNIIQGLERQV---------------KCNPNSNVSGY--YYDGF 137
           LL E  P SVR ++I   I   L+R +               K N   +      + DG 
Sbjct: 80  LLPEIHPESVRVRMIANRIFDALKRDLSKKNMWRDDLGKSRKKANQRQSHQPCTSHLDGL 139

Query: 138 NWNILVV-DNFIMHAHCIPGGTIFICVGMLQALTDGEVAAVISHEVGH 278
           NW ILVV DN I +A+  P G + +  G+L+ LT  ++A +I+HEVGH
Sbjct: 140 NWGILVVNDNTIANAYSYPNGKVMVFTGLLELLTSDDLATLIAHEVGH 187


>ref|XP_002318862.1| predicted protein [Populus trichocarpa] gi|222859535|gb|EEE97082.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = +3

Query: 123 YYDGFNWNILVVDNFIMHAHCIPGGTIFICVGMLQAL-TDGEVAAVISHEVGH 278
           + DG NW ILVV+  +++A C+PGG I +  G+L+   TD E+A +I HEVGH
Sbjct: 200 HLDGLNWEILVVNEPVVNAFCLPGGKIVVFTGLLEHFRTDAEIATIIGHEVGH 252


>ref|XP_003534034.1| PREDICTED: uncharacterized protein LOC100799127 [Glycine max]
          Length = 448

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +3

Query: 105 SNVSGYYYDGFNWNILVVDNFIMHAHCIPGGTIFICVGMLQAL-TDGEVAAVISHEVGH 278
           S  +  + DG NW ILVV+  +++A C+PGG I +  G+L+   +D E+A +I HEVGH
Sbjct: 260 SQAATSHLDGLNWEILVVNEPVVNAFCLPGGKIVVFTGLLEHFKSDAEIATIIGHEVGH 318


>ref|XP_004160882.1| PREDICTED: uncharacterized LOC101206881 [Cucumis sativus]
          Length = 440

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +3

Query: 75  LERQVKCNPNSNVSGYYYDGFNWNILVVDNFIMHAHCIPGGTIFICVGMLQAL-TDGEVA 251
           +E   K    S  +  + DG NW +LVV+  +++A C+PGG I +  G+L+   +D E+A
Sbjct: 243 VEHSRKKGQGSQANTSHLDGLNWEVLVVNEPVVNAFCLPGGKIVVFTGLLEHFRSDAEIA 302

Query: 252 AVISHEVGH 278
            +I HEV H
Sbjct: 303 TIIGHEVAH 311


>ref|XP_004148121.1| PREDICTED: uncharacterized protein LOC101206881 [Cucumis sativus]
          Length = 440

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +3

Query: 75  LERQVKCNPNSNVSGYYYDGFNWNILVVDNFIMHAHCIPGGTIFICVGMLQAL-TDGEVA 251
           +E   K    S  +  + DG NW +LVV+  +++A C+PGG I +  G+L+   +D E+A
Sbjct: 243 VEHSRKKGQGSQANTSHLDGLNWEVLVVNEPVVNAFCLPGGKIVVFTGLLEHFRSDAEIA 302

Query: 252 AVISHEVGH 278
            +I HEV H
Sbjct: 303 TIIGHEVAH 311


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