BLASTX nr result

ID: Coptis24_contig00009675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009675
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein ...   431   e-118
ref|XP_002527655.1| conserved hypothetical protein [Ricinus comm...   417   e-114
ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|1...   414   e-113
ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_003517027.1| PREDICTED: uncharacterized membrane protein ...   408   e-111

>ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
            vinifera]
          Length = 254

 Score =  431 bits (1108), Expect = e-118
 Identities = 214/242 (88%), Positives = 230/242 (95%)
 Frame = -3

Query: 1069 NNNNKFPLSFWEVTVALCVVVSFVLGLACVYLTMPASDYSFLKLPRTLEDLQILRDHLED 890
            N   +FPL+FWEVT A  VV +FVLGLACVYLTMPASDYSFLKLPR+LED+QILRDHLED
Sbjct: 12   NVEGRFPLTFWEVTGASAVVGAFVLGLACVYLTMPASDYSFLKLPRSLEDIQILRDHLED 71

Query: 889  YTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCY 710
            YTSDYT+QVLVGYC+VYIFMQTFMIPGTVFMSLLAG+LFGVFKGVALVVFTATAGASSCY
Sbjct: 72   YTSDYTVQVLVGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFTATAGASSCY 131

Query: 709  FLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASPIVDV 530
            FLSKLIGRPLV  LWPDK+SFFQ QVAKRR+ LLNYMLFLRVTPTLPNTFIN+ASP+VDV
Sbjct: 132  FLSKLIGRPLVSFLWPDKLSFFQAQVAKRRERLLNYMLFLRVTPTLPNTFINVASPMVDV 191

Query: 529  PYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPTLMSK 350
            PYHIFFLATFIGLIPAAY+TVRAGIALG+LRS+GDLYDFQ+IATLFLIGVVSVTPTLMSK
Sbjct: 192  PYHIFFLATFIGLIPAAYVTVRAGIALGELRSVGDLYDFQSIATLFLIGVVSVTPTLMSK 251

Query: 349  RK 344
             K
Sbjct: 252  NK 253


>ref|XP_002527655.1| conserved hypothetical protein [Ricinus communis]
            gi|223532960|gb|EEF34726.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 263

 Score =  417 bits (1073), Expect = e-114
 Identities = 208/262 (79%), Positives = 234/262 (89%), Gaps = 6/262 (2%)
 Frame = -3

Query: 1111 IDVDSSRTYVGPTNNNNNK------FPLSFWEVTVALCVVVSFVLGLACVYLTMPASDYS 950
            ++ +++R   G  NN  N+      FPLSFWEVTVA  VV  FV+GL  VYLTMP SDYS
Sbjct: 1    METENARIGGGDGNNKKNEGIYGSGFPLSFWEVTVAATVVFGFVVGLLGVYLTMPPSDYS 60

Query: 949  FLKLPRTLEDLQILRDHLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFG 770
            FLKLPR+L+DLQILRDHLE YTSDYT QVL+GYC+VYIFMQTFMIPGTVFMSLLAGALFG
Sbjct: 61   FLKLPRSLQDLQILRDHLETYTSDYTAQVLIGYCVVYIFMQTFMIPGTVFMSLLAGALFG 120

Query: 769  VFKGVALVVFTATAGASSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFL 590
            VFKGVALVVFTATAGASSCYFLSK+IGRPLVF+LWPDK+SFFQ QVA+R+  LLNYMLFL
Sbjct: 121  VFKGVALVVFTATAGASSCYFLSKVIGRPLVFSLWPDKLSFFQEQVARRKDSLLNYMLFL 180

Query: 589  RVTPTLPNTFINLASPIVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQ 410
            R+TPTLPNTFIN+ASPIVDVPYHIFFLATFIGLIPAAY+TV+AGIALG+L+S+GDLYDF 
Sbjct: 181  RLTPTLPNTFINVASPIVDVPYHIFFLATFIGLIPAAYVTVKAGIALGELQSLGDLYDFN 240

Query: 409  AIATLFLIGVVSVTPTLMSKRK 344
            ++ATLFLIGVVS+TPTLMSK K
Sbjct: 241  SVATLFLIGVVSITPTLMSKSK 262


>ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|118488236|gb|ABK95937.1|
            unknown [Populus trichocarpa] gi|222841775|gb|EEE79322.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  414 bits (1063), Expect = e-113
 Identities = 207/246 (84%), Positives = 224/246 (91%)
 Frame = -3

Query: 1081 GPTNNNNNKFPLSFWEVTVALCVVVSFVLGLACVYLTMPASDYSFLKLPRTLEDLQILRD 902
            G   N  ++FPLSFWEV  A  VV+ FVL L  VYLTMPASDYSFLKLPRTLEDLQILRD
Sbjct: 3    GKGGNVGSRFPLSFWEVGAASSVVLGFVLCLLGVYLTMPASDYSFLKLPRTLEDLQILRD 62

Query: 901  HLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 722
            HLE YT DYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGV KGVALVVFTATAGA
Sbjct: 63   HLETYTIDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVLKGVALVVFTATAGA 122

Query: 721  SSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASP 542
            SSCYFLSKLIGRPLVF+LWPDK+SFFQ QVA+RR GLLNYMLFLR+TPTLPNTFIN+ASP
Sbjct: 123  SSCYFLSKLIGRPLVFSLWPDKLSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASP 182

Query: 541  IVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPT 362
            IVDVPYHIFFLAT IGLIPAAY+TV+AGIALG+L+SIGDLYDF +IATLFLIG++S+TPT
Sbjct: 183  IVDVPYHIFFLATLIGLIPAAYVTVKAGIALGELQSIGDLYDFNSIATLFLIGIISITPT 242

Query: 361  LMSKRK 344
            LMSK K
Sbjct: 243  LMSKSK 248


>ref|XP_002326733.1| predicted protein [Populus trichocarpa] gi|222834055|gb|EEE72532.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  413 bits (1061), Expect = e-113
 Identities = 205/246 (83%), Positives = 225/246 (91%)
 Frame = -3

Query: 1081 GPTNNNNNKFPLSFWEVTVALCVVVSFVLGLACVYLTMPASDYSFLKLPRTLEDLQILRD 902
            G   +  ++FPLS WEV  A  V++ FVLGL  VYLTMP SDYSFLKLPRTLEDLQILRD
Sbjct: 3    GKGGHVGSRFPLSSWEVAAASSVLLGFVLGLLGVYLTMPESDYSFLKLPRTLEDLQILRD 62

Query: 901  HLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 722
            HLE YTSDYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA
Sbjct: 63   HLETYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 122

Query: 721  SSCYFLSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASP 542
            SSCYFLSKLIGRPLVF+LWPDK+SFFQ QVA+RR GLLNYMLFLR+TPTLPNTFIN+ASP
Sbjct: 123  SSCYFLSKLIGRPLVFSLWPDKLSFFQEQVARRRGGLLNYMLFLRLTPTLPNTFINVASP 182

Query: 541  IVDVPYHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPT 362
            IVDVPYHIFFLAT IGL+PAAY+TV+AGIALG+L+SIGDLYDF +IATLFLIG+VS+TPT
Sbjct: 183  IVDVPYHIFFLATLIGLVPAAYVTVKAGIALGELQSIGDLYDFNSIATLFLIGIVSITPT 242

Query: 361  LMSKRK 344
            L+SK K
Sbjct: 243  LISKSK 248


>ref|XP_003517027.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Glycine
            max]
          Length = 288

 Score =  408 bits (1049), Expect = e-111
 Identities = 201/241 (83%), Positives = 223/241 (92%)
 Frame = -3

Query: 1066 NNNKFPLSFWEVTVALCVVVSFVLGLACVYLTMPASDYSFLKLPRTLEDLQILRDHLEDY 887
            + +KFPLSFWE TVA  V + F +GL  VYLTMP SDYSFLKLPRTL+DLQ+LRD+LE Y
Sbjct: 47   STSKFPLSFWETTVASTVALVFAVGLLGVYLTMPDSDYSFLKLPRTLQDLQLLRDNLESY 106

Query: 886  TSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF 707
            TSDYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF
Sbjct: 107  TSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYF 166

Query: 706  LSKLIGRPLVFALWPDKMSFFQTQVAKRRKGLLNYMLFLRVTPTLPNTFINLASPIVDVP 527
            LSKLIGRP++ +LWP+K+ FFQTQVAKRRKGLLNYMLFLR+TPTLPNTFIN ASPIVDVP
Sbjct: 167  LSKLIGRPILSSLWPEKLKFFQTQVAKRRKGLLNYMLFLRLTPTLPNTFINFASPIVDVP 226

Query: 526  YHIFFLATFIGLIPAAYLTVRAGIALGDLRSIGDLYDFQAIATLFLIGVVSVTPTLMSKR 347
            YHIFFLAT IGLIPAAY+TV+AG+ALG+L+S+GDLYDF +IATLFLIGVVSVTPTLMSK 
Sbjct: 227  YHIFFLATVIGLIPAAYVTVKAGLALGELQSVGDLYDFNSIATLFLIGVVSVTPTLMSKN 286

Query: 346  K 344
            +
Sbjct: 287  E 287


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