BLASTX nr result
ID: Coptis24_contig00009660
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009660 (834 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539119.1| PREDICTED: protein Dom3z homolog, chloroplas... 58 2e-06 ref|XP_003539118.1| PREDICTED: protein Dom3z homolog, chloroplas... 58 2e-06 ref|XP_003517391.1| PREDICTED: protein Dom3z homolog, chloroplas... 58 2e-06 emb|CAB10542.1| hypothetical protein [Arabidopsis thaliana] gi|7... 57 4e-06 ref|XP_002283072.2| PREDICTED: protein Dom3z homolog, chloroplas... 57 7e-06 >ref|XP_003539119.1| PREDICTED: protein Dom3z homolog, chloroplastic-like isoform 2 [Glycine max] Length = 499 Score = 58.2 bits (139), Expect = 2e-06 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = +3 Query: 69 RDDAGRLVRTERLRTKDITHRVKLKNYW 152 RDDAGRLVRTERLRTKDIT RVK+KNYW Sbjct: 416 RDDAGRLVRTERLRTKDITQRVKMKNYW 443 >ref|XP_003539118.1| PREDICTED: protein Dom3z homolog, chloroplastic-like isoform 1 [Glycine max] Length = 507 Score = 58.2 bits (139), Expect = 2e-06 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = +3 Query: 69 RDDAGRLVRTERLRTKDITHRVKLKNYW 152 RDDAGRLVRTERLRTKDIT RVK+KNYW Sbjct: 424 RDDAGRLVRTERLRTKDITQRVKMKNYW 451 >ref|XP_003517391.1| PREDICTED: protein Dom3z homolog, chloroplastic-like [Glycine max] Length = 507 Score = 58.2 bits (139), Expect = 2e-06 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = +3 Query: 69 RDDAGRLVRTERLRTKDITHRVKLKNYW 152 RDDAGRLVRTERLRTKDIT RVK+KNYW Sbjct: 424 RDDAGRLVRTERLRTKDITQRVKMKNYW 451 >emb|CAB10542.1| hypothetical protein [Arabidopsis thaliana] gi|7268514|emb|CAB78765.1| hypothetical protein [Arabidopsis thaliana] Length = 1148 Score = 57.4 bits (137), Expect = 4e-06 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +3 Query: 69 RDDAGRLVRTERLRTKDITHRVKLKNYWYIDAVSS 173 RDD GRLVRTERL T+DI HR +LKNYW + +SS Sbjct: 1109 RDDGGRLVRTERLTTRDIAHRARLKNYWQVSVISS 1143 >ref|XP_002283072.2| PREDICTED: protein Dom3z homolog, chloroplastic [Vitis vinifera] Length = 428 Score = 56.6 bits (135), Expect = 7e-06 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +3 Query: 69 RDDAGRLVRTERLRTKDITHRVKLKNYW 152 RDD GRLVRTERLRTKDIT RVK+KNYW Sbjct: 345 RDDGGRLVRTERLRTKDITQRVKMKNYW 372