BLASTX nr result

ID: Coptis24_contig00009655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009655
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|2...   184   4e-44
ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
ref|XP_003520299.1| PREDICTED: uncharacterized protein LOC100798...   178   3e-42
ref|XP_002521549.1| conserved hypothetical protein [Ricinus comm...   177   5e-42
ref|XP_003612063.1| hypothetical protein MTR_5g020870 [Medicago ...   177   5e-42

>ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|222836876|gb|EEE75269.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  184 bits (467), Expect = 4e-44
 Identities = 113/259 (43%), Positives = 145/259 (55%), Gaps = 3/259 (1%)
 Frame = -3

Query: 994 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSLKFVDAIEELSSECSP 815
           GD +DFFDPQ                 D +  + +   + +    +F DA EELSSE  P
Sbjct: 199 GDVDDFFDPQDSMSYTSNTDVE-----DTTAAECSMKLTAAIPVGEFYDAWEELSSESGP 253

Query: 814 HVLHRDVT--AELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPST 641
           H         AELR++R SLLMEI+ RKQAEEA   +Q QW+R+ Q L+L GL+LP    
Sbjct: 254 HPSPSPHLSGAELREMRLSLLMEIEKRKQAEEALTNMQNQWQRIRQELALVGLSLPAFPV 313

Query: 640 NATE-DEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQ 464
           +  E D+ S+++P EE+CQQI L R VS S+GR  AKAEAEIELE+++  KNFEI RL  
Sbjct: 314 DVPENDQPSDSNPAEEICQQIYLARFVSESIGRGIAKAEAEIELEAQVEEKNFEIARLCD 373

Query: 463 RLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTD 284
           RLHYYE VN EMS RNQE +E+            +             + ALAWS++P  
Sbjct: 374 RLHYYEAVNREMSHRNQEVIEMARRNRQARKRRRKWIWGSIAAAITLGTTALAWSYLPAM 433

Query: 283 GVSFPTDTSHAPEVEGAAN 227
             S     SHAPE +  AN
Sbjct: 434 RGSSSASDSHAPEHDDTAN 452


>ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|222853159|gb|EEE90706.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  182 bits (463), Expect = 1e-43
 Identities = 123/314 (39%), Positives = 162/314 (51%), Gaps = 10/314 (3%)
 Frame = -3

Query: 1138 GKKKTMPTTFTSLSLDRFLQPKSASLSSSNMQTISSKSPGEEVIINEIGDYEDFFDPQXX 959
            G+ K + +  +S+ L      K  SL    ++ I          +   GD +DFFDPQ  
Sbjct: 119  GENKVVDSRSSSVQLGTGDTRKDLSLEKDMLKPIEQN-------VERNGDSDDFFDPQDS 171

Query: 958  XXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSL-----KFVDAIEELSSEC----SPHVL 806
                           +  VED     S    +      +F DA EELSSE     SP   
Sbjct: 172  MSYTS----------NTDVEDTTAVESSMKLTAALPVGEFYDAWEELSSESGQQPSPSPH 221

Query: 805  HRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPSTNATE- 629
            H    AELR++R SLLMEI+ RKQAEEA D +Q+QW+R+ Q L+L GL+LP    +  E 
Sbjct: 222  HNG--AELREMRLSLLMEIEKRKQAEEALDNMQSQWQRIRQELALVGLSLPACPVDVPES 279

Query: 628  DEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLHYY 449
            D+ S+ +PVEE+CQQI L R VS S+GR  AKAEAEIE+E+++ +KNFEI RL  RLHYY
Sbjct: 280  DQPSDVNPVEEICQQIYLARFVSESIGRGIAKAEAEIEMEAQVEAKNFEIARLLDRLHYY 339

Query: 448  EVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTDGVSFP 269
            E VN E+S  NQE +E             +                LAWS++P    S  
Sbjct: 340  EAVNRELSQWNQEVIETARRNRQIRKRRQKWVWGSIAAAITLGMTTLAWSYLPAMSGSSS 399

Query: 268  TDTSHAPEVEGAAN 227
            +  SHAPE +  AN
Sbjct: 400  SSDSHAPEHDDTAN 413


>ref|XP_003520299.1| PREDICTED: uncharacterized protein LOC100798468 [Glycine max]
          Length = 438

 Score =  178 bits (451), Expect = 3e-42
 Identities = 107/256 (41%), Positives = 143/256 (55%)
 Frame = -3

Query: 994 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSLKFVDAIEELSSECSP 815
           G+ EDFFDP              +   D        AG  S    +F DA EELSS+   
Sbjct: 192 GESEDFFDPHDSMSLKSCTDAEDNTGAD-------QAGKFSAAGGEFFDAWEELSSDGGT 244

Query: 814 HVLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPSTNA 635
              HRD+ AELR+IR SLLMEI+ RKQ EE+ + +Q+QWERL QRLSL G+ LP+  T  
Sbjct: 245 QNSHRDIEAELREIRLSLLMEIEKRKQVEESLNSMQSQWERLRQRLSLMGIALPSDLT-- 302

Query: 634 TEDEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLH 455
            E  +  +DP+E++CQQ+ + R +S ++GR  A+AEAEIE+E+++ SKNFEI RL +RLH
Sbjct: 303 AEGGQLSSDPMEDVCQQLYIARFISNTIGRGIARAEAEIEMEAQLESKNFEIARLLERLH 362

Query: 454 YYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTDGVS 275
            YE +N EMS RNQE VE+            R             + A+AWS++P    S
Sbjct: 363 CYETMNREMSQRNQEAVEMARRERQRRSRRQRWIWGSITTAIAVGTAAIAWSYLPVGRGS 422

Query: 274 FPTDTSHAPEVEGAAN 227
                    E + AAN
Sbjct: 423 TSAVHDQVSEHDDAAN 438


>ref|XP_002521549.1| conserved hypothetical protein [Ricinus communis]
           gi|223539227|gb|EEF40820.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 475

 Score =  177 bits (449), Expect = 5e-42
 Identities = 112/258 (43%), Positives = 142/258 (55%), Gaps = 8/258 (3%)
 Frame = -3

Query: 994 GDYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSL-------KFVDAIEE 836
           G+ EDFFDPQ                +  + +  +N G ES   L       +F DA EE
Sbjct: 224 GESEDFFDPQESMS------------YTSNTDGEDNCGVESSIKLAATTPVGEFYDAWEE 271

Query: 835 LSSECSPHVLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTL 656
           LSSE       RD+ AELR++R SLL+EI+ RKQAEE  +  Q  W+R+ ++L+L GLTL
Sbjct: 272 LSSESGQQSSFRDIEAELREMRLSLLVEIEKRKQAEETLNNAQNHWQRMREQLALVGLTL 331

Query: 655 PTPSTNATEDEKS-EADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEI 479
           P       E E S + DP EELCQQ+ L R VS S+GR  AKAEAE+E E++I +KNFEI
Sbjct: 332 PAFPFADPEGELSLDTDPAEELCQQVYLARFVSDSIGRGMAKAEAEMEKEAQIEAKNFEI 391

Query: 478 TRLSQRLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWS 299
            RL  RLHYYE +N EMS RNQE VE+            R             + ALAWS
Sbjct: 392 ARLVDRLHYYEAMNREMSQRNQEAVEMARRNRQVRKGRQRWVWGSIATVVTLGTAALAWS 451

Query: 298 FIPTDGVSFPTDTSHAPE 245
           ++P    S  +  S APE
Sbjct: 452 YLPATKGSSSSSDSLAPE 469


>ref|XP_003612063.1| hypothetical protein MTR_5g020870 [Medicago truncatula]
           gi|355513398|gb|AES95021.1| hypothetical protein
           MTR_5g020870 [Medicago truncatula]
           gi|388497508|gb|AFK36820.1| unknown [Medicago
           truncatula]
          Length = 439

 Score =  177 bits (449), Expect = 5e-42
 Identities = 100/254 (39%), Positives = 143/254 (56%)
 Frame = -3

Query: 991 DYEDFFDPQXXXXXXXXXXXXSDRFFDLSVEDVNNAGSESYGSLKFVDAIEELSSECSPH 812
           D EDFFDPQ             +   DLS++  +  G       +F DA EELSS+ +  
Sbjct: 192 DIEDFFDPQDSMSFTSNTDVEENAGTDLSMKFSSPGG-------EFYDAWEELSSDAATQ 244

Query: 811 VLHRDVTAELRKIRRSLLMEIDSRKQAEEARDIVQTQWERLAQRLSLEGLTLPTPSTNAT 632
               DV AELR++R SLLMEI+ RKQAEE+ + ++ QW+ + Q L L G+ LP   T   
Sbjct: 245 NSASDVEAELREMRLSLLMEIEKRKQAEESLNNMRNQWQSIRQGLYLAGIILPADLTAVA 304

Query: 631 EDEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLHY 452
           E E+  +DPVE+LCQQ+ + R +S ++GR T + E E+E+E+++ SKNFEI RL +RLH 
Sbjct: 305 EGEQLNSDPVEDLCQQLYVARFISNTIGRATVRTEVEMEMEAQLESKNFEIARLMERLHC 364

Query: 451 YEVVNSEMSLRNQETVEIEXXXXXXXXXXXRXXXXXXXXXXXXXSMALAWSFIPTDGVSF 272
           YE +N EMS RNQE VE+            +             + A+AWS++P  G S+
Sbjct: 365 YETMNHEMSQRNQEAVEMARRERQRKSKKQKWIWGSLTTVIALGTAAVAWSYLPAGGESY 424

Query: 271 PTDTSHAPEVEGAA 230
             +    P+ + AA
Sbjct: 425 SAEDHPVPKHDDAA 438


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