BLASTX nr result
ID: Coptis24_contig00009653
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009653 (290 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 105 4e-21 emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 105 4e-21 ref|XP_003599019.1| Pentatricopeptide repeat-containing protein ... 95 7e-18 ref|XP_002528456.1| pentatricopeptide repeat-containing protein,... 92 4e-17 ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containi... 91 8e-17 >ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like [Vitis vinifera] Length = 1005 Score = 105 bits (262), Expect = 4e-21 Identities = 49/96 (51%), Positives = 66/96 (68%) Frame = +1 Query: 1 VSWGTMMAGYVHNARFGETLKLFGRLRIGNLKLNQXXXXXXXXXXXEMGDMDKGKEIHHY 180 VSWGTMMAGY HN F E L+LF ++++GN+++N+ E D++KGKEIH Sbjct: 295 VSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGC 354 Query: 181 AIEDGIDMDVSVATSVMTMYAKCGEPEKAKHMFVGI 288 A++ ID D+ VAT +M MYAKCGE EKAK +F G+ Sbjct: 355 ALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390 >emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] Length = 1005 Score = 105 bits (262), Expect = 4e-21 Identities = 49/96 (51%), Positives = 66/96 (68%) Frame = +1 Query: 1 VSWGTMMAGYVHNARFGETLKLFGRLRIGNLKLNQXXXXXXXXXXXEMGDMDKGKEIHHY 180 VSWGTMMAGY HN F E L+LF ++++GN+++N+ E D++KGKEIH Sbjct: 295 VSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGC 354 Query: 181 AIEDGIDMDVSVATSVMTMYAKCGEPEKAKHMFVGI 288 A++ ID D+ VAT +M MYAKCGE EKAK +F G+ Sbjct: 355 ALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390 >ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 944 Score = 94.7 bits (234), Expect = 7e-18 Identities = 44/96 (45%), Positives = 66/96 (68%) Frame = +1 Query: 1 VSWGTMMAGYVHNARFGETLKLFGRLRIGNLKLNQXXXXXXXXXXXEMGDMDKGKEIHHY 180 VSW TMMAGYV N + E L+L ++R GN+K+N+ EM D++KGKEI++Y Sbjct: 265 VSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNY 324 Query: 181 AIEDGIDMDVSVATSVMTMYAKCGEPEKAKHMFVGI 288 A++ G+ D+ VAT ++ MYAKCGE +KA+ +F+ + Sbjct: 325 ALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSL 360 >ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223532132|gb|EEF33939.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 664 Score = 92.0 bits (227), Expect = 4e-17 Identities = 44/96 (45%), Positives = 60/96 (62%) Frame = +1 Query: 1 VSWGTMMAGYVHNARFGETLKLFGRLRIGNLKLNQXXXXXXXXXXXEMGDMDKGKEIHHY 180 +SW TMMAGY HN F E L LF ++ N +LN+ ++ D +GKEI + Sbjct: 180 ISWRTMMAGYAHNECFFEVLDLFDYMKKNNFRLNKVSVASALLAAADVRDSGRGKEICEF 239 Query: 181 AIEDGIDMDVSVATSVMTMYAKCGEPEKAKHMFVGI 288 A + GID DVS+ T++MTMYAKCG +KAK +F G+ Sbjct: 240 ARQQGIDSDVSITTAMMTMYAKCGNLDKAKQLFQGL 275 Score = 56.6 bits (135), Expect = 2e-06 Identities = 26/93 (27%), Positives = 46/93 (49%) Frame = +1 Query: 1 VSWGTMMAGYVHNARFGETLKLFGRLRIGNLKLNQXXXXXXXXXXXEMGDMDKGKEIHHY 180 VSW ++AGYVHN E LF ++++ + + N + + +G +H Sbjct: 484 VSWNALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMALHAC 543 Query: 181 AIEDGIDMDVSVATSVMTMYAKCGEPEKAKHMF 279 + G +V V ++ MYAKCG+ ++H+F Sbjct: 544 IMRMGFQSNVLVGNCLIDMYAKCGQLHNSEHLF 576 >ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like [Glycine max] Length = 887 Score = 91.3 bits (225), Expect = 8e-17 Identities = 40/96 (41%), Positives = 64/96 (66%) Frame = +1 Query: 1 VSWGTMMAGYVHNARFGETLKLFGRLRIGNLKLNQXXXXXXXXXXXEMGDMDKGKEIHHY 180 +SW TMMAGYVH+ + E L+L ++ ++K+N+ E D++KGKE+H+Y Sbjct: 294 ISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNY 353 Query: 181 AIEDGIDMDVSVATSVMTMYAKCGEPEKAKHMFVGI 288 A++ G+ D+ VAT +++MYAKCGE +KAK F+ + Sbjct: 354 ALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSL 389