BLASTX nr result
ID: Coptis24_contig00009652
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009652 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516329.1| conserved hypothetical protein [Ricinus comm... 151 5e-35 emb|CBI21595.3| unnamed protein product [Vitis vinifera] 148 4e-34 ref|XP_002275503.1| PREDICTED: F-box protein At5g39450-like [Vit... 148 4e-34 emb|CAN77670.1| hypothetical protein VITISV_024978 [Vitis vinifera] 148 4e-34 ref|XP_004146388.1| PREDICTED: F-box protein At5g39450-like [Cuc... 145 4e-33 >ref|XP_002516329.1| conserved hypothetical protein [Ricinus communis] gi|223544559|gb|EEF46076.1| conserved hypothetical protein [Ricinus communis] Length = 636 Score = 151 bits (382), Expect = 5e-35 Identities = 67/96 (69%), Positives = 80/96 (83%) Frame = -2 Query: 288 CGSSLFLALPDDVFAFVTCTLAPKDVCNLGLCCKNLSALTGSVKVWLVQCESVGVVGSLE 109 CGSSL LALPDDVFA V+ L+P+D+CNL LCC++L L S KVWL QC+ VG+V + Sbjct: 5 CGSSLLLALPDDVFAIVSRALSPRDICNLSLCCRSLCVLVASEKVWLTQCDMVGIVPHRD 64 Query: 108 LVEWRKGVSSYKSLCKFLCSVKPLIGIWVHQNPELG 1 L+EWRKGVSSYK+LC+FL SVKPL+GIWVHQNPELG Sbjct: 65 LIEWRKGVSSYKALCRFLVSVKPLMGIWVHQNPELG 100 >emb|CBI21595.3| unnamed protein product [Vitis vinifera] Length = 544 Score = 148 bits (374), Expect = 4e-34 Identities = 67/96 (69%), Positives = 81/96 (84%) Frame = -2 Query: 288 CGSSLFLALPDDVFAFVTCTLAPKDVCNLGLCCKNLSALTGSVKVWLVQCESVGVVGSLE 109 CGSSL LALPDD+FA V+ +L+P+D+CNL L C++LS L S KVWL QCE VGVV + Sbjct: 6 CGSSLLLALPDDLFAMVSRSLSPRDLCNLSLGCRSLSTLVASEKVWLTQCEMVGVVSYGD 65 Query: 108 LVEWRKGVSSYKSLCKFLCSVKPLIGIWVHQNPELG 1 L+EWRKG+SSYK+LC+FL SVKPL+GIWVHQNPELG Sbjct: 66 LIEWRKGISSYKALCRFLISVKPLLGIWVHQNPELG 101 >ref|XP_002275503.1| PREDICTED: F-box protein At5g39450-like [Vitis vinifera] Length = 601 Score = 148 bits (374), Expect = 4e-34 Identities = 67/96 (69%), Positives = 81/96 (84%) Frame = -2 Query: 288 CGSSLFLALPDDVFAFVTCTLAPKDVCNLGLCCKNLSALTGSVKVWLVQCESVGVVGSLE 109 CGSSL LALPDD+FA V+ +L+P+D+CNL L C++LS L S KVWL QCE VGVV + Sbjct: 6 CGSSLLLALPDDLFAMVSRSLSPRDLCNLSLGCRSLSTLVASEKVWLTQCEMVGVVSYGD 65 Query: 108 LVEWRKGVSSYKSLCKFLCSVKPLIGIWVHQNPELG 1 L+EWRKG+SSYK+LC+FL SVKPL+GIWVHQNPELG Sbjct: 66 LIEWRKGISSYKALCRFLISVKPLLGIWVHQNPELG 101 >emb|CAN77670.1| hypothetical protein VITISV_024978 [Vitis vinifera] Length = 641 Score = 148 bits (374), Expect = 4e-34 Identities = 67/96 (69%), Positives = 81/96 (84%) Frame = -2 Query: 288 CGSSLFLALPDDVFAFVTCTLAPKDVCNLGLCCKNLSALTGSVKVWLVQCESVGVVGSLE 109 CGSSL LALPDD+FA V+ +L+P+D+CNL L C++LS L S KVWL QCE VGVV + Sbjct: 6 CGSSLLLALPDDLFAMVSRSLSPRDLCNLSLGCRSLSTLVASEKVWLTQCEMVGVVSYGD 65 Query: 108 LVEWRKGVSSYKSLCKFLCSVKPLIGIWVHQNPELG 1 L+EWRKG+SSYK+LC+FL SVKPL+GIWVHQNPELG Sbjct: 66 LIEWRKGISSYKALCRFLISVKPLLGIWVHQNPELG 101 >ref|XP_004146388.1| PREDICTED: F-box protein At5g39450-like [Cucumis sativus] Length = 623 Score = 145 bits (365), Expect = 4e-33 Identities = 61/100 (61%), Positives = 82/100 (82%) Frame = -2 Query: 300 VPNQCGSSLFLALPDDVFAFVTCTLAPKDVCNLGLCCKNLSALTGSVKVWLVQCESVGVV 121 +P CG SLFL+LPDDVF+ V+ +L P+D+CNL LCC++L A T S K+WL QCE VGV+ Sbjct: 2 LPEVCGLSLFLSLPDDVFSIVSRSLTPRDLCNLSLCCRSLHASTASEKIWLTQCEMVGVL 61 Query: 120 GSLELVEWRKGVSSYKSLCKFLCSVKPLIGIWVHQNPELG 1 + +L++WR GV+SYK+LC+FL ++PL+GIWVHQNPELG Sbjct: 62 AAKDLIDWRTGVASYKALCRFLTRIEPLMGIWVHQNPELG 101