BLASTX nr result

ID: Coptis24_contig00009646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009646
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein...   509   e-142
emb|CBI36054.3| unnamed protein product [Vitis vinifera]              505   e-140
ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein...   505   e-140
ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp....   501   e-139

>ref|XP_004141667.1| PREDICTED: clavaminate synthase-like protein At3g21360-like [Cucumis
            sativus]
          Length = 324

 Score =  509 bits (1310), Expect = e-142
 Identities = 242/328 (73%), Positives = 285/328 (86%)
 Frame = -1

Query: 1131 MSVENLGFTELIKLTYQKNYNGNNFPSIITPKTSNRFNLSTFCETITNQKQWLESLLHSS 952
            M+VENL     I++ +QK+Y  + FP +++P +++ F +S+F + I  QK  ++SL+ +S
Sbjct: 1    MAVENL---MEIQIPHQKHYPASYFPLVLSPSSAS-FAVSSFAQAIKAQKSTIDSLILNS 56

Query: 951  GALLLRGFPVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHH 772
            GA+L RGFPV+ ASDFN VVEAFGYEE PYVGGAAPR+ V+GRVFTANESPPDQ IPFHH
Sbjct: 57   GAILFRGFPVEAASDFNDVVEAFGYEEFPYVGGAAPRSKVVGRVFTANESPPDQKIPFHH 116

Query: 771  EMAQVPEFPSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVL 592
            E+AQVPEFP+KLFF+CE EPR+GGETPIVLSHV+YER+KE+YP+FVE+LE  GLIYTRVL
Sbjct: 117  ELAQVPEFPAKLFFYCEVEPRSGGETPIVLSHVVYERVKEKYPEFVERLEEQGLIYTRVL 176

Query: 591  GAGDDPSSPIGRGWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKR 412
            G  DDPSSPIGRGW STFLT +K+IAEERAA+LGMKLEW KDGVKT+MGPIPA+K+DK R
Sbjct: 177  GEDDDPSSPIGRGWKSTFLTHDKSIAEERAAKLGMKLEWLKDGVKTVMGPIPAIKHDKVR 236

Query: 411  GRKVWFNSMVAAYIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGD 232
             RK+WFNSMVAAY GW+D RNDPVKAVTFGDGTPLPADIIY CL +L+EE VAIPWQKGD
Sbjct: 237  QRKIWFNSMVAAYTGWEDARNDPVKAVTFGDGTPLPADIIYGCLRILEEESVAIPWQKGD 296

Query: 231  ILLIDNWAALHSRRPFEPPRRILASLCK 148
            ILLIDNWA LHSRRPF PPRRILASLC+
Sbjct: 297  ILLIDNWAVLHSRRPFLPPRRILASLCR 324


>emb|CBI36054.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  505 bits (1300), Expect = e-140
 Identities = 235/316 (74%), Positives = 273/316 (86%), Gaps = 1/316 (0%)
 Frame = -1

Query: 1092 LTYQKNYNGNNFPSIITP-KTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGFPVKT 916
            + +QK Y+G  FP ++TP + +    LS   ++I   K WL+SLLH +GA+LLR FPV T
Sbjct: 40   IPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAVLLRDFPVTT 99

Query: 915  ASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQVPEFPSKL 736
            ASDFN VVEAFG+ ELPYVGGAAPRT V+GRVFT+NESPPDQ IPFHHEMAQVPEFPSKL
Sbjct: 100  ASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMAQVPEFPSKL 159

Query: 735  FFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSSPIGR 556
            FFFCE EP TGGETPIVLSH++YERMK +YP+FV++LE  GL+YTRVLG  DDPSSPIGR
Sbjct: 160  FFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGEDDDPSSPIGR 219

Query: 555  GWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKRGRKVWFNSMVAA 376
            GW STFLT++K  AE+RAA+LGMKLEW +DGVKTIMGPIPAVKYD+ R RK+WFNSMVAA
Sbjct: 220  GWKSTFLTQDKTTAEKRAAQLGMKLEWMEDGVKTIMGPIPAVKYDESRQRKIWFNSMVAA 279

Query: 375  YIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLIDNWAALHS 196
            Y GW+D RNDPVKAVTFGDG PLPADIIY CL++L+EECVA+PWQKGD+LL+DNWA LHS
Sbjct: 280  YTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVLLLDNWAVLHS 339

Query: 195  RRPFEPPRRILASLCK 148
            RRPF+PPRR+LASLCK
Sbjct: 340  RRPFDPPRRVLASLCK 355


>ref|XP_002283642.1| PREDICTED: clavaminate synthase-like protein At3g21360 [Vitis
            vinifera]
          Length = 325

 Score =  505 bits (1300), Expect = e-140
 Identities = 235/316 (74%), Positives = 273/316 (86%), Gaps = 1/316 (0%)
 Frame = -1

Query: 1092 LTYQKNYNGNNFPSIITP-KTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGFPVKT 916
            + +QK Y+G  FP ++TP + +    LS   ++I   K WL+SLLH +GA+LLR FPV T
Sbjct: 10   IPHQKLYSGAPFPLVLTPGQGAQSLGLSHLTQSIKAHKPWLQSLLHRAGAVLLRDFPVTT 69

Query: 915  ASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQVPEFPSKL 736
            ASDFN VVEAFG+ ELPYVGGAAPRT V+GRVFT+NESPPDQ IPFHHEMAQVPEFPSKL
Sbjct: 70   ASDFNDVVEAFGFAELPYVGGAAPRTKVVGRVFTSNESPPDQKIPFHHEMAQVPEFPSKL 129

Query: 735  FFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSSPIGR 556
            FFFCE EP TGGETPIVLSH++YERMK +YP+FV++LE  GL+YTRVLG  DDPSSPIGR
Sbjct: 130  FFFCEVEPGTGGETPIVLSHIVYERMKAKYPEFVQRLEERGLMYTRVLGEDDDPSSPIGR 189

Query: 555  GWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKRGRKVWFNSMVAA 376
            GW STFLT++K  AE+RAA+LGMKLEW +DGVKTIMGPIPAVKYD+ R RK+WFNSMVAA
Sbjct: 190  GWKSTFLTQDKTTAEKRAAQLGMKLEWMEDGVKTIMGPIPAVKYDESRQRKIWFNSMVAA 249

Query: 375  YIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLIDNWAALHS 196
            Y GW+D RNDPVKAVTFGDG PLPADIIY CL++L+EECVA+PWQKGD+LL+DNWA LHS
Sbjct: 250  YTGWEDARNDPVKAVTFGDGLPLPADIIYDCLKILEEECVAVPWQKGDVLLLDNWAVLHS 309

Query: 195  RRPFEPPRRILASLCK 148
            RRPF+PPRR+LASLCK
Sbjct: 310  RRPFDPPRRVLASLCK 325


>ref|XP_002298245.1| predicted protein [Populus trichocarpa] gi|222845503|gb|EEE83050.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score =  504 bits (1297), Expect = e-140
 Identities = 238/320 (74%), Positives = 274/320 (85%), Gaps = 3/320 (0%)
 Frame = -1

Query: 1098 IKLTYQKNYNGNN---FPSIITPKTSNRFNLSTFCETITNQKQWLESLLHSSGALLLRGF 928
            I++ +QK+Y+      FPS+++P   +   LS F ++I  QK +L+SLL  +GA+L RGF
Sbjct: 8    IQIQHQKHYSNIPSFPFPSVLSPNPFSSSTLSFFTDSIIAQKPFLDSLLLKTGAILFRGF 67

Query: 927  PVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQVPEF 748
             V TA DFN VVEAFG+EELPYVGGAAPRTNV+GRVFTANESPPDQ IPFHHEMAQVPEF
Sbjct: 68   DVNTAKDFNDVVEAFGFEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQVPEF 127

Query: 747  PSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDDPSS 568
            PSKLFFFCE EP +GGETPIVLSHV+YERMKERYPDFVEK+E HGLIYTRVLG  DDPSS
Sbjct: 128  PSKLFFFCEVEPGSGGETPIVLSHVVYERMKERYPDFVEKIEEHGLIYTRVLGEEDDPSS 187

Query: 567  PIGRGWHSTFLTKEKNIAEERAARLGMKLEWTKDGVKTIMGPIPAVKYDKKRGRKVWFNS 388
            PIGRGW STFLT +K++AE+RAA+LGM LEW +DGVKTIMGPIPA+KYDK R RK+WFNS
Sbjct: 188  PIGRGWKSTFLTNDKSVAEQRAAKLGMTLEWFEDGVKTIMGPIPAIKYDKSRNRKIWFNS 247

Query: 387  MVAAYIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLIDNWA 208
            MVAAY GWKD RNDPVKAVTFGDG PLP DII+ CL++L+EE +AIPWQKGD+LLIDNWA
Sbjct: 248  MVAAYTGWKDARNDPVKAVTFGDGQPLPGDIIHDCLKILEEESLAIPWQKGDVLLIDNWA 307

Query: 207  ALHSRRPFEPPRRILASLCK 148
             LH+RR F PPRR+LASLCK
Sbjct: 308  VLHARRSFNPPRRVLASLCK 327


>ref|XP_002883301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329141|gb|EFH59560.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  501 bits (1289), Expect = e-139
 Identities = 230/324 (70%), Positives = 276/324 (85%), Gaps = 5/324 (1%)
 Frame = -1

Query: 1104 ELIKLTYQKNYNGNNFPSIITPKTSN----RFNLSTFCETITNQKQWLESLLHSSGALLL 937
            E  ++  QK+Y    FP++I+P +S+      +L  F ++I NQK +L+SLLH SG ++ 
Sbjct: 7    EETRIPQQKHYKSKPFPAVISPPSSSIPIPAVSLPLFTQSIKNQKPYLDSLLHESGTVIF 66

Query: 936  RGFPVKTASDFNQVVEAFGYEELPYVGGAAPRTNVIGRVFTANESPPDQIIPFHHEMAQV 757
            RGFPV +A DFN VVEAFG++E PYVGGAAPRT+V+GRVFTANESPPDQ IPFHHEMAQV
Sbjct: 67   RGFPVNSAEDFNDVVEAFGFDEFPYVGGAAPRTSVVGRVFTANESPPDQKIPFHHEMAQV 126

Query: 756  PEFPSKLFFFCEEEPRTGGETPIVLSHVIYERMKERYPDFVEKLETHGLIYTRVLGAGDD 577
            PEFPSKLFF+CE EP++GGETPIVLSHV+YERMKE++P+FV++LE HGL+Y RVLG  DD
Sbjct: 127  PEFPSKLFFYCEIEPKSGGETPIVLSHVVYERMKEKHPEFVQRLEEHGLLYVRVLGEDDD 186

Query: 576  PSSPIGRGWHSTFLTKEKNIAEERAARLGMKLEWTKD-GVKTIMGPIPAVKYDKKRGRKV 400
            PSSPIGRGW STFLT +KN+AE+RAA LGMKLEWT+D G KT+MGPIPA+KYD+ R RKV
Sbjct: 187  PSSPIGRGWKSTFLTHDKNLAEQRAANLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKV 246

Query: 399  WFNSMVAAYIGWKDDRNDPVKAVTFGDGTPLPADIIYKCLELLDEECVAIPWQKGDILLI 220
            WFNSMVAAY GW+D RNDP KAVTFGDG PLP DI++ CL +L+EECVA+PWQ+GD+LLI
Sbjct: 247  WFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPEDIVHDCLRILEEECVAVPWQRGDVLLI 306

Query: 219  DNWAALHSRRPFEPPRRILASLCK 148
            DNWA LHSRRPFEPPRR+LASLCK
Sbjct: 307  DNWAVLHSRRPFEPPRRVLASLCK 330


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