BLASTX nr result

ID: Coptis24_contig00009625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009625
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314899.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
tpg|DAA58878.1| TPA: etched1 [Zea mays]                                83   2e-14
ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038....    83   3e-14
ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [S...    83   3e-14
ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG...    82   3e-14

>ref|XP_002314899.1| predicted protein [Populus trichocarpa] gi|222863939|gb|EEF01070.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/99 (44%), Positives = 58/99 (58%)
 Frame = +2

Query: 56  NQNSILFFKPSNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNI 235
           N    + F  +N R ++     ++ +R+  L  +    D N +        +   E   I
Sbjct: 36  NSYKPISFSTTNPRLRISHTEAILPKRSRRLFVVSGLVDGNSETYPEVESNDLNEESATI 95

Query: 236 DIKLPRRSLLVKFTCNACGERTERLINRLAYERGTVFVQ 352
           DIKLPRRSLLV+FTCN CGER++RLINRLAYERG VFVQ
Sbjct: 96  DIKLPRRSLLVQFTCNECGERSQRLINRLAYERGLVFVQ 134


>tpg|DAA58878.1| TPA: etched1 [Zea mays]
          Length = 166

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/89 (51%), Positives = 60/89 (67%)
 Frame = +2

Query: 86  SNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNIDIKLPRRSLL 265
           S+++ +  +P   ++ R   L  I++ S S E    +   P     E  IDIKLPRRSLL
Sbjct: 44  SSSKLRALAPRLRVSNRPRRL--IVSASSSGEANSDAAPSPT----EAAIDIKLPRRSLL 97

Query: 266 VKFTCNACGERTERLINRLAYERGTVFVQ 352
           V+FTCNACGERT+RLINR+AYERGTVF+Q
Sbjct: 98  VQFTCNACGERTKRLINRVAYERGTVFLQ 126


>ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea
           mays] gi|48596293|emb|CAD45039.1| ETCHED1 protein [Zea
           mays]
          Length = 163

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/89 (51%), Positives = 60/89 (67%)
 Frame = +2

Query: 86  SNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNIDIKLPRRSLL 265
           S+++ +  +P   ++ R   L  I++ S S E    +   P     E  IDIKLPRRSLL
Sbjct: 41  SSSKLRALAPRLRVSNRPRRL--IVSASSSGEANSDAVPSPT----EAAIDIKLPRRSLL 94

Query: 266 VKFTCNACGERTERLINRLAYERGTVFVQ 352
           V+FTCNACGERT+RLINR+AYERGTVF+Q
Sbjct: 95  VQFTCNACGERTKRLINRVAYERGTVFLQ 123


>ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor]
           gi|241930096|gb|EES03241.1| hypothetical protein
           SORBIDRAFT_03g027210 [Sorghum bicolor]
          Length = 163

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = +2

Query: 167 SDSNEDELASESQPNKPLEETNIDIKLPRRSLLVKFTCNACGERTERLINRLAYERGTVF 346
           S S+  E  S++ P+ P E T IDIKLPRRSLLV+FTCNACGERT+RLINR+AYERGTVF
Sbjct: 64  SASSSGEANSDAVPS-PTEAT-IDIKLPRRSLLVQFTCNACGERTKRLINRVAYERGTVF 121

Query: 347 VQ 352
           +Q
Sbjct: 122 LQ 123


>ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG39419.1| zinc ribbon 1
           [Zea mays]
          Length = 161

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/89 (51%), Positives = 60/89 (67%)
 Frame = +2

Query: 86  SNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNIDIKLPRRSLL 265
           S+++ +  +P   ++ R   L  I++ S S E    +   P     E  IDIKLPRRSLL
Sbjct: 39  SSSKLRALAPRLRVSNRPRRL--IVSASSSGEANSDAVPSP----AEAAIDIKLPRRSLL 92

Query: 266 VKFTCNACGERTERLINRLAYERGTVFVQ 352
           V+FTCNACGERT+RLINR+AYERGTVF+Q
Sbjct: 93  VQFTCNACGERTKRLINRVAYERGTVFLQ 121


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