BLASTX nr result
ID: Coptis24_contig00009625
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009625 (352 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314899.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 tpg|DAA58878.1| TPA: etched1 [Zea mays] 83 2e-14 ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.... 83 3e-14 ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [S... 83 3e-14 ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG... 82 3e-14 >ref|XP_002314899.1| predicted protein [Populus trichocarpa] gi|222863939|gb|EEF01070.1| predicted protein [Populus trichocarpa] Length = 169 Score = 83.6 bits (205), Expect = 2e-14 Identities = 44/99 (44%), Positives = 58/99 (58%) Frame = +2 Query: 56 NQNSILFFKPSNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNI 235 N + F +N R ++ ++ +R+ L + D N + + E I Sbjct: 36 NSYKPISFSTTNPRLRISHTEAILPKRSRRLFVVSGLVDGNSETYPEVESNDLNEESATI 95 Query: 236 DIKLPRRSLLVKFTCNACGERTERLINRLAYERGTVFVQ 352 DIKLPRRSLLV+FTCN CGER++RLINRLAYERG VFVQ Sbjct: 96 DIKLPRRSLLVQFTCNECGERSQRLINRLAYERGLVFVQ 134 >tpg|DAA58878.1| TPA: etched1 [Zea mays] Length = 166 Score = 83.2 bits (204), Expect = 2e-14 Identities = 46/89 (51%), Positives = 60/89 (67%) Frame = +2 Query: 86 SNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNIDIKLPRRSLL 265 S+++ + +P ++ R L I++ S S E + P E IDIKLPRRSLL Sbjct: 44 SSSKLRALAPRLRVSNRPRRL--IVSASSSGEANSDAAPSPT----EAAIDIKLPRRSLL 97 Query: 266 VKFTCNACGERTERLINRLAYERGTVFVQ 352 V+FTCNACGERT+RLINR+AYERGTVF+Q Sbjct: 98 VQFTCNACGERTKRLINRVAYERGTVFLQ 126 >ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea mays] gi|48596293|emb|CAD45039.1| ETCHED1 protein [Zea mays] Length = 163 Score = 82.8 bits (203), Expect = 3e-14 Identities = 46/89 (51%), Positives = 60/89 (67%) Frame = +2 Query: 86 SNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNIDIKLPRRSLL 265 S+++ + +P ++ R L I++ S S E + P E IDIKLPRRSLL Sbjct: 41 SSSKLRALAPRLRVSNRPRRL--IVSASSSGEANSDAVPSPT----EAAIDIKLPRRSLL 94 Query: 266 VKFTCNACGERTERLINRLAYERGTVFVQ 352 V+FTCNACGERT+RLINR+AYERGTVF+Q Sbjct: 95 VQFTCNACGERTKRLINRVAYERGTVFLQ 123 >ref|XP_002458121.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor] gi|241930096|gb|EES03241.1| hypothetical protein SORBIDRAFT_03g027210 [Sorghum bicolor] Length = 163 Score = 82.8 bits (203), Expect = 3e-14 Identities = 44/62 (70%), Positives = 52/62 (83%) Frame = +2 Query: 167 SDSNEDELASESQPNKPLEETNIDIKLPRRSLLVKFTCNACGERTERLINRLAYERGTVF 346 S S+ E S++ P+ P E T IDIKLPRRSLLV+FTCNACGERT+RLINR+AYERGTVF Sbjct: 64 SASSSGEANSDAVPS-PTEAT-IDIKLPRRSLLVQFTCNACGERTKRLINRVAYERGTVF 121 Query: 347 VQ 352 +Q Sbjct: 122 LQ 123 >ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG39419.1| zinc ribbon 1 [Zea mays] Length = 161 Score = 82.4 bits (202), Expect = 3e-14 Identities = 46/89 (51%), Positives = 60/89 (67%) Frame = +2 Query: 86 SNTRTKLFSPCKLITRRTAILAPIIATSDSNEDELASESQPNKPLEETNIDIKLPRRSLL 265 S+++ + +P ++ R L I++ S S E + P E IDIKLPRRSLL Sbjct: 39 SSSKLRALAPRLRVSNRPRRL--IVSASSSGEANSDAVPSP----AEAAIDIKLPRRSLL 92 Query: 266 VKFTCNACGERTERLINRLAYERGTVFVQ 352 V+FTCNACGERT+RLINR+AYERGTVF+Q Sbjct: 93 VQFTCNACGERTKRLINRVAYERGTVFLQ 121