BLASTX nr result

ID: Coptis24_contig00009623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009623
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP20477.1| RelA/SpoT-like protein [Quercus suber]                 724   0.0  
gb|AAQ23899.1| RSH2 [Nicotiana tabacum]                               722   0.0  
emb|CBI35865.3| unnamed protein product [Vitis vinifera]              717   0.0  
ref|XP_002273796.1| PREDICTED: GTP pyrophosphokinase-like [Vitis...   717   0.0  
ref|XP_003627298.1| GTP pyrophosphokinase [Medicago truncatula] ...   716   0.0  

>gb|AEP20477.1| RelA/SpoT-like protein [Quercus suber]
          Length = 506

 Score =  724 bits (1869), Expect = 0.0
 Identities = 350/439 (79%), Positives = 393/439 (89%)
 Frame = -1

Query: 1319 VFYEELVVKAFYEAEKAHRGQMRASGDPYLLHCVQTAILLATIGANSTVVAAGLLHDTLD 1140
            +F E+ VVKAFYEAEKAHRGQMRASGDPYL HCV+TA++LA IGANSTVVAAGLLHDTLD
Sbjct: 1    IFCEDFVVKAFYEAEKAHRGQMRASGDPYLQHCVETAVMLALIGANSTVVAAGLLHDTLD 60

Query: 1139 DSHISYDYIHRTFGAGVADLVEGVSKLSHLSKLARENNTANKTVEADRLHTMFLAMADAR 960
            DS ++YDY+  TFGAGVADLVEGVSKLSHLSKLAR+NNTANKTVEADRLHTMFLAMADAR
Sbjct: 61   DSFMNYDYVFGTFGAGVADLVEGVSKLSHLSKLARDNNTANKTVEADRLHTMFLAMADAR 120

Query: 959  AVLIKLADRLHNMMTLGALPMLKQQRFAKETLEIFVPLANRLGISNWKEQLENLCFKHLN 780
            AVLIKLADRLHNMMTL ALP  KQQRFAKETLEIF PLANRLGIS+WK+QLENLCFKHL+
Sbjct: 121  AVLIKLADRLHNMMTLDALPPAKQQRFAKETLEIFAPLANRLGISSWKDQLENLCFKHLH 180

Query: 779  PEQHKEMSSKLVKSFDDALIALEIEKLEQALNGGGVSYHILTGRHKSLYSIYCKMIKKKL 600
            P+QH+E+SSKLV+SFD+A+I    EKL+QAL    VSY  L+GRHKSLYSIY KM+KKKL
Sbjct: 181  PDQHEELSSKLVESFDEAMITSATEKLKQALKAKSVSYQDLSGRHKSLYSIYSKMLKKKL 240

Query: 599  SMDEIHDIHGLRLIVENEEDCYMALKIVHQLWPEVPGKLKDYITCPKFNGYQSLHTVVLG 420
            +MDEIHDIHGLRLIV+NEEDCY AL++VHQLWPEVPGKLKDYI+ PKFNGY+SLHTVV+ 
Sbjct: 241  TMDEIHDIHGLRLIVDNEEDCYKALRVVHQLWPEVPGKLKDYISHPKFNGYRSLHTVVMD 300

Query: 419  EDMSPFEVQIRTKDMHLQAEFGFAAHWRYKEGDCKYSSYVLQMVEWARWVVTWQCESMSK 240
            E M P EVQIRT++MHLQAEFGFAAHWRYKEGDCK+ S+VLQMVEWARWVVT QCE+M+ 
Sbjct: 301  EGMVPLEVQIRTREMHLQAEFGFAAHWRYKEGDCKHPSFVLQMVEWARWVVTCQCETMN- 359

Query: 239  DCLASLGSTDSIRPPCPFPWHSDGCPHSYVPHSCQDGPVFIVMIENEKMSVQEFPPNSTV 60
               +S+   DSIRPPC FP HS+ CP+SY PH  QDGPVF++MIEN+KMSVQEFP NST+
Sbjct: 360  ---SSIAYADSIRPPCTFPSHSEDCPYSYKPHCGQDGPVFVIMIENDKMSVQEFPANSTI 416

Query: 59   MDLLERVGRGSSRWSPYRF 3
            MDLLER GRGSSRW+PY F
Sbjct: 417  MDLLERSGRGSSRWTPYGF 435


>gb|AAQ23899.1| RSH2 [Nicotiana tabacum]
          Length = 718

 Score =  722 bits (1864), Expect = 0.0
 Identities = 348/440 (79%), Positives = 392/440 (89%)
 Frame = -1

Query: 1322 KVFYEELVVKAFYEAEKAHRGQMRASGDPYLLHCVQTAILLATIGANSTVVAAGLLHDTL 1143
            K+F ++ V+KAFYEAEKAHRGQ+RASGDPYL HCV+TA+LLA IGANSTVVAAGLLHDTL
Sbjct: 212  KIFCDDFVIKAFYEAEKAHRGQVRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTL 271

Query: 1142 DDSHISYDYIHRTFGAGVADLVEGVSKLSHLSKLARENNTANKTVEADRLHTMFLAMADA 963
            DD+ ++YDYI RT GAGVADLVEGVSKLS LSKLAR+ NTA+KTVEADRLHTMFLAMADA
Sbjct: 272  DDTFMTYDYIFRTLGAGVADLVEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADA 331

Query: 962  RAVLIKLADRLHNMMTLGALPMLKQQRFAKETLEIFVPLANRLGISNWKEQLENLCFKHL 783
            RAVLIKLADRLHNMMTL ALP+ KQQRFAKETLEIF PLANRLGIS WKEQLENLCFKHL
Sbjct: 332  RAVLIKLADRLHNMMTLDALPLAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHL 391

Query: 782  NPEQHKEMSSKLVKSFDDALIALEIEKLEQALNGGGVSYHILTGRHKSLYSIYCKMIKKK 603
            NP+QH E+SSKLVKSFD+A+I   + KLEQAL    VSYH+L+GRHKSLYSIYCKM+KKK
Sbjct: 392  NPDQHNELSSKLVKSFDEAMITSSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKK 451

Query: 602  LSMDEIHDIHGLRLIVENEEDCYMALKIVHQLWPEVPGKLKDYITCPKFNGYQSLHTVVL 423
            L+MDE+HDIHGLRLIVEN+EDCY AL++VHQLW EVPG+ KDYI  PKFNGYQSLHTVVL
Sbjct: 452  LNMDEVHDIHGLRLIVENKEDCYKALRVVHQLWSEVPGRYKDYIANPKFNGYQSLHTVVL 511

Query: 422  GEDMSPFEVQIRTKDMHLQAEFGFAAHWRYKEGDCKYSSYVLQMVEWARWVVTWQCESMS 243
            GE M P EVQIRTK+MHLQAE+GFAAHWRYKEG CK+SS+V QMVEWARWVVTWQCE+M+
Sbjct: 512  GEGMVPLEVQIRTKEMHLQAEYGFAAHWRYKEGACKHSSFVNQMVEWARWVVTWQCETMN 571

Query: 242  KDCLASLGSTDSIRPPCPFPWHSDGCPHSYVPHSCQDGPVFIVMIENEKMSVQEFPPNST 63
            +D  +S+G T+SI+PPC FP HS+ CP S  P+   DGPVFI+MI+N+KMSVQEFP NST
Sbjct: 572  RD-QSSVGHTESIQPPCKFPAHSEDCPFSCKPNCGTDGPVFIIMIDNDKMSVQEFPANST 630

Query: 62   VMDLLERVGRGSSRWSPYRF 3
            V DLLER GRGSSRW+PY F
Sbjct: 631  VKDLLERAGRGSSRWTPYGF 650


>emb|CBI35865.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score =  717 bits (1850), Expect = 0.0
 Identities = 347/440 (78%), Positives = 387/440 (87%)
 Frame = -1

Query: 1322 KVFYEELVVKAFYEAEKAHRGQMRASGDPYLLHCVQTAILLATIGANSTVVAAGLLHDTL 1143
            K+F E+ VVKAFYEAE+AHRGQMRASGDPYL HCV+TA+LLA IGANSTVV +GLLHDTL
Sbjct: 26   KIFSEDFVVKAFYEAERAHRGQMRASGDPYLQHCVETAVLLAKIGANSTVVVSGLLHDTL 85

Query: 1142 DDSHISYDYIHRTFGAGVADLVEGVSKLSHLSKLARENNTANKTVEADRLHTMFLAMADA 963
            DDS + YD I  TFGAGVADLVEGVSKLS LSKLAR+NNTA+KTVEADRLHTMFLAMADA
Sbjct: 86   DDSFMGYDDIFGTFGAGVADLVEGVSKLSQLSKLARDNNTASKTVEADRLHTMFLAMADA 145

Query: 962  RAVLIKLADRLHNMMTLGALPMLKQQRFAKETLEIFVPLANRLGISNWKEQLENLCFKHL 783
            RAVLIKLADRLHNMMTL ALP+ KQQRFAKETLEIFVPLANRLGIS WKEQLENLCFKHL
Sbjct: 146  RAVLIKLADRLHNMMTLDALPLGKQQRFAKETLEIFVPLANRLGISTWKEQLENLCFKHL 205

Query: 782  NPEQHKEMSSKLVKSFDDALIALEIEKLEQALNGGGVSYHILTGRHKSLYSIYCKMIKKK 603
            NP+QHKE+SSKLVKSFD+A+I    EKLE AL    +SYH+L+GRHKSLYSIYCKM+KK 
Sbjct: 206  NPDQHKELSSKLVKSFDEAMITSAKEKLEPALKDEAISYHVLSGRHKSLYSIYCKMLKKN 265

Query: 602  LSMDEIHDIHGLRLIVENEEDCYMALKIVHQLWPEVPGKLKDYITCPKFNGYQSLHTVVL 423
            ++MDEIHDIHGLRLIVENEEDCY AL +VH+LW EVPG+ KDYI   KFNGY+SLHTVV 
Sbjct: 266  MTMDEIHDIHGLRLIVENEEDCYKALGVVHRLWSEVPGRFKDYIKHSKFNGYRSLHTVVR 325

Query: 422  GEDMSPFEVQIRTKDMHLQAEFGFAAHWRYKEGDCKYSSYVLQMVEWARWVVTWQCESMS 243
            GE M P EVQIRT++MHLQAE+GFAAHWRYKEGDC +SS+VLQMVEWARWVVTW CE+MS
Sbjct: 326  GEGMVPLEVQIRTREMHLQAEYGFAAHWRYKEGDCTHSSFVLQMVEWARWVVTWHCETMS 385

Query: 242  KDCLASLGSTDSIRPPCPFPWHSDGCPHSYVPHSCQDGPVFIVMIENEKMSVQEFPPNST 63
            KD  + +G  +SI+PPC FP HSDGCP SY P   QDGPVF++M+EN+KMSVQE P NST
Sbjct: 386  KD-QSPVGYDNSIKPPCKFPSHSDGCPFSYKPDCSQDGPVFVIMLENDKMSVQECPANST 444

Query: 62   VMDLLERVGRGSSRWSPYRF 3
            +MDLLER GRGSSRW+PY F
Sbjct: 445  IMDLLERTGRGSSRWTPYGF 464


>ref|XP_002273796.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
          Length = 724

 Score =  717 bits (1850), Expect = 0.0
 Identities = 347/440 (78%), Positives = 387/440 (87%)
 Frame = -1

Query: 1322 KVFYEELVVKAFYEAEKAHRGQMRASGDPYLLHCVQTAILLATIGANSTVVAAGLLHDTL 1143
            K+F E+ VVKAFYEAE+AHRGQMRASGDPYL HCV+TA+LLA IGANSTVV +GLLHDTL
Sbjct: 215  KIFSEDFVVKAFYEAERAHRGQMRASGDPYLQHCVETAVLLAKIGANSTVVVSGLLHDTL 274

Query: 1142 DDSHISYDYIHRTFGAGVADLVEGVSKLSHLSKLARENNTANKTVEADRLHTMFLAMADA 963
            DDS + YD I  TFGAGVADLVEGVSKLS LSKLAR+NNTA+KTVEADRLHTMFLAMADA
Sbjct: 275  DDSFMGYDDIFGTFGAGVADLVEGVSKLSQLSKLARDNNTASKTVEADRLHTMFLAMADA 334

Query: 962  RAVLIKLADRLHNMMTLGALPMLKQQRFAKETLEIFVPLANRLGISNWKEQLENLCFKHL 783
            RAVLIKLADRLHNMMTL ALP+ KQQRFAKETLEIFVPLANRLGIS WKEQLENLCFKHL
Sbjct: 335  RAVLIKLADRLHNMMTLDALPLGKQQRFAKETLEIFVPLANRLGISTWKEQLENLCFKHL 394

Query: 782  NPEQHKEMSSKLVKSFDDALIALEIEKLEQALNGGGVSYHILTGRHKSLYSIYCKMIKKK 603
            NP+QHKE+SSKLVKSFD+A+I    EKLE AL    +SYH+L+GRHKSLYSIYCKM+KK 
Sbjct: 395  NPDQHKELSSKLVKSFDEAMITSAKEKLEPALKDEAISYHVLSGRHKSLYSIYCKMLKKN 454

Query: 602  LSMDEIHDIHGLRLIVENEEDCYMALKIVHQLWPEVPGKLKDYITCPKFNGYQSLHTVVL 423
            ++MDEIHDIHGLRLIVENEEDCY AL +VH+LW EVPG+ KDYI   KFNGY+SLHTVV 
Sbjct: 455  MTMDEIHDIHGLRLIVENEEDCYKALGVVHRLWSEVPGRFKDYIKHSKFNGYRSLHTVVR 514

Query: 422  GEDMSPFEVQIRTKDMHLQAEFGFAAHWRYKEGDCKYSSYVLQMVEWARWVVTWQCESMS 243
            GE M P EVQIRT++MHLQAE+GFAAHWRYKEGDC +SS+VLQMVEWARWVVTW CE+MS
Sbjct: 515  GEGMVPLEVQIRTREMHLQAEYGFAAHWRYKEGDCTHSSFVLQMVEWARWVVTWHCETMS 574

Query: 242  KDCLASLGSTDSIRPPCPFPWHSDGCPHSYVPHSCQDGPVFIVMIENEKMSVQEFPPNST 63
            KD  + +G  +SI+PPC FP HSDGCP SY P   QDGPVF++M+EN+KMSVQE P NST
Sbjct: 575  KD-QSPVGYDNSIKPPCKFPSHSDGCPFSYKPDCSQDGPVFVIMLENDKMSVQECPANST 633

Query: 62   VMDLLERVGRGSSRWSPYRF 3
            +MDLLER GRGSSRW+PY F
Sbjct: 634  IMDLLERTGRGSSRWTPYGF 653


>ref|XP_003627298.1| GTP pyrophosphokinase [Medicago truncatula]
            gi|66947621|emb|CAJ00006.1| RelA-SpoT homolog 1 [Medicago
            truncatula] gi|355521320|gb|AET01774.1| GTP
            pyrophosphokinase [Medicago truncatula]
          Length = 726

 Score =  716 bits (1848), Expect = 0.0
 Identities = 344/440 (78%), Positives = 392/440 (89%)
 Frame = -1

Query: 1322 KVFYEELVVKAFYEAEKAHRGQMRASGDPYLLHCVQTAILLATIGANSTVVAAGLLHDTL 1143
            K+F EE V+KAF EAEKAHRGQMRASGDPYL HC++TA+LLA IGANSTVVAAGLLHDT+
Sbjct: 216  KIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTV 275

Query: 1142 DDSHISYDYIHRTFGAGVADLVEGVSKLSHLSKLARENNTANKTVEADRLHTMFLAMADA 963
            DD+ ++YDYI+  FGAGVADLVEGVSKLSHLSKLAR+NNTA+K+VEADRLHTMFLAMADA
Sbjct: 276  DDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADA 335

Query: 962  RAVLIKLADRLHNMMTLGALPMLKQQRFAKETLEIFVPLANRLGISNWKEQLENLCFKHL 783
            RAVLIKLADRLHNMMTL ALP+ KQQRFAKETLEIF PLANRLGI+NWK+QLENLCFKHL
Sbjct: 336  RAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHL 395

Query: 782  NPEQHKEMSSKLVKSFDDALIALEIEKLEQALNGGGVSYHILTGRHKSLYSIYCKMIKKK 603
            NP QHKE+SSKLV+S+DDA+IA  IE+LEQAL   G+SYH+++GRHKSLYS+YCK++KKK
Sbjct: 396  NPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKK 455

Query: 602  LSMDEIHDIHGLRLIVENEEDCYMALKIVHQLWPEVPGKLKDYITCPKFNGYQSLHTVVL 423
            L++D+IHDI+GLRLIV+ EEDCY ALK+VH+LW EV GKLKDYI  PKFNGYQSLHTVV+
Sbjct: 456  LTIDDIHDIYGLRLIVDKEEDCYKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVM 515

Query: 422  GEDMSPFEVQIRTKDMHLQAEFGFAAHWRYKEGDCKYSSYVLQMVEWARWVVTWQCESMS 243
            GE   P EVQ+RTKDMHLQAEFGFAAHWRYKE  C+ SSYVLQMVEWARWVVTWQCE+MS
Sbjct: 516  GEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMS 575

Query: 242  KDCLASLGSTDSIRPPCPFPWHSDGCPHSYVPHSCQDGPVFIVMIENEKMSVQEFPPNST 63
            KD   S+G  DSI+PPC FP H+D CP+SY P   QDGPVF++MIEN+KMSVQEF  NST
Sbjct: 576  KDS-TSVGYVDSIKPPCKFPSHADNCPYSYKPDCAQDGPVFVIMIENDKMSVQEFCANST 634

Query: 62   VMDLLERVGRGSSRWSPYRF 3
            V+DLLERVGR S R + YRF
Sbjct: 635  VLDLLERVGRASCRLTTYRF 654


Top