BLASTX nr result

ID: Coptis24_contig00009619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009619
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256...   124   8e-27
ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like iso...   119   3e-25
ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002512472.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycin...   113   2e-23

>ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256314 isoform 1 [Vitis
           vinifera] gi|359487500|ref|XP_003633604.1| PREDICTED:
           uncharacterized protein LOC100256314 isoform 2 [Vitis
           vinifera] gi|296089710|emb|CBI39529.3| unnamed protein
           product [Vitis vinifera]
          Length = 125

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/76 (75%), Positives = 71/76 (93%)
 Frame = -1

Query: 229 DFSVEIAVAVIVDGSYNLKIDTQHLRNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNV 50
           ++SVE A+A+++DGS NLKI+TQHLR+ +FR GSIYQFIGELLI+PD EA+LQAR+GRNV
Sbjct: 38  EYSVETAIAIVIDGSANLKINTQHLRDLTFRAGSIYQFIGELLIQPDNEAILQARVGRNV 97

Query: 49  DGIDLNLYYQSLQLLR 2
           DGIDLNLY+QSLQL+R
Sbjct: 98  DGIDLNLYHQSLQLVR 113


>ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like isoform 1 [Cucumis
           sativus] gi|449454055|ref|XP_004144771.1| PREDICTED: CST
           complex subunit TEN1-like isoform 2 [Cucumis sativus]
           gi|449490870|ref|XP_004158731.1| PREDICTED: CST complex
           subunit TEN1-like isoform 1 [Cucumis sativus]
           gi|449490872|ref|XP_004158732.1| PREDICTED: CST complex
           subunit TEN1-like isoform 2 [Cucumis sativus]
          Length = 126

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/76 (73%), Positives = 68/76 (89%)
 Frame = -1

Query: 229 DFSVEIAVAVIVDGSYNLKIDTQHLRNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNV 50
           ++SVE A+A+IVDG+ NLKIDTQHL   S R+GSIYQFIGELL++ D EA+L+AR+GRNV
Sbjct: 39  EYSVETAIAIIVDGNVNLKIDTQHLIELSIRIGSIYQFIGELLVQSDNEAILKARVGRNV 98

Query: 49  DGIDLNLYYQSLQLLR 2
           DGIDLNLY+QSLQLLR
Sbjct: 99  DGIDLNLYHQSLQLLR 114


>ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|222871690|gb|EEF08821.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/76 (71%), Positives = 69/76 (90%)
 Frame = -1

Query: 229 DFSVEIAVAVIVDGSYNLKIDTQHLRNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNV 50
           +++VE A+AV+ DG+  LKIDTQHLR+ SFR+GS+YQFIGELLI+PD+EA+LQAR+GR  
Sbjct: 38  EYTVETAIAVVADGNATLKIDTQHLRDISFRIGSVYQFIGELLIQPDSEAILQARVGRIA 97

Query: 49  DGIDLNLYYQSLQLLR 2
           DGIDL+LY+QSLQLLR
Sbjct: 98  DGIDLSLYHQSLQLLR 113


>ref|XP_002512472.1| conserved hypothetical protein [Ricinus communis]
           gi|223548433|gb|EEF49924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/76 (72%), Positives = 67/76 (88%)
 Frame = -1

Query: 229 DFSVEIAVAVIVDGSYNLKIDTQHLRNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNV 50
           +++V+ A+A I DG+  LKIDTQHL + SFR+GS+YQFIGELLI+PD EA+LQAR+GRNV
Sbjct: 38  EYTVDTAIARIADGNAILKIDTQHLSDLSFRIGSVYQFIGELLIQPDDEAILQARVGRNV 97

Query: 49  DGIDLNLYYQSLQLLR 2
           DGIDLNLY QSLQLLR
Sbjct: 98  DGIDLNLYNQSLQLLR 113


>ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycine max]
           gi|255625773|gb|ACU13231.1| unknown [Glycine max]
          Length = 126

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/77 (67%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 HDFSVEIAVAVIVDGSYNLKIDTQHLRNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRN 53
           H++S+E  +A I+DG   LK+ T+HLR+ +F+VGS+YQFIGELLI+PD E VLQAR+GRN
Sbjct: 37  HEYSIETGLATIIDGDDILKVSTKHLRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRN 96

Query: 52  VDGIDLNLYYQSLQLLR 2
           VDGIDLNLY+QSL LLR
Sbjct: 97  VDGIDLNLYHQSLLLLR 113


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