BLASTX nr result

ID: Coptis24_contig00009608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009608
         (4950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16571.3| unnamed protein product [Vitis vinifera]              893   0.0  
ref|XP_002523390.1| nuclear pore complex protein nup153, putativ...   784   0.0  
ref|XP_003526034.1| PREDICTED: uncharacterized protein LOC100806...   762   0.0  
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...   716   0.0  
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...   714   0.0  

>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
          Length = 1685

 Score =  893 bits (2307), Expect = 0.0
 Identities = 612/1652 (37%), Positives = 883/1652 (53%), Gaps = 53/1652 (3%)
 Frame = +1

Query: 88   KSIIQLD-EEVEGDLKELEDLFFKKIGHSIPLKPQPFSFDLQNP-PTHPLAVSESPPALF 261
            +S+I L+ +++EG   + +D  F KIG S+ +KPQ ++F+L +P P+ PLAVSE    +F
Sbjct: 5    ESVIDLEGKDLEGGRLDCDDYVFVKIGESVTIKPQYYNFNLDSPLPSQPLAVSERSQLIF 64

Query: 262  LAHSQGFYVVRTKDVIQGAKERK----GCCIEEMSVVNVQIGRVHIVAVSRDCSTLAACV 429
            +AHS GF V RT+ VI+ AKE K    G  I+E+SVV+V I  V I+A+S D STLAA V
Sbjct: 65   VAHSDGFCVARTEAVIELAKEIKEKGSGSSIQELSVVDVPIANVRILALSTDSSTLAASV 124

Query: 430  GAKIYFFAIESLLNKEQEPLYSCSIDESSYVRDFRWRKKKSKTSFVVLSRNGKLYHGDLD 609
            G  I+FF+++SLLNK QEP ++ S+  SS V+D RWRKK    S+VVLS +GKLYHG  +
Sbjct: 125  GGDIHFFSVDSLLNKGQEPSFTRSLSGSSSVKDMRWRKKMDN-SYVVLSSDGKLYHGAAE 183

Query: 610  IPLKEVMDNVDAVDWSTEGNCIAVAKTNYLSIFSSRFRERFTLSIPLSSCVGDTDSKCTV 789
             PLK+VMD VDAV+WS +GN IAVA+ N LS+ SS+F+ER  +S+   S +GD+   CTV
Sbjct: 184  GPLKDVMDGVDAVEWSVKGNSIAVARKNTLSLLSSKFKERLCMSLSFKSWIGDSGVNCTV 243

Query: 790  KVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDGKISEVSSKPVVLSFDRAFAAI 969
            KVDSI WVR DCI+LGC  +T DGKE+ +++Q+++SK+GKI++ SS P VLSF   F  +
Sbjct: 244  KVDSIRWVRPDCIILGCFKLTADGKEESFMVQVVTSKEGKITDASSLPTVLSFYDVFPGL 303

Query: 970  DDDMMPFGSGPHLFMNYLEHRELALVANRKNRDQHIVLFGWSLDDEQDEAALVELVQEDR 1149
             DD++PFGSGP+LF++YLE  +LA+  +RKN D HIVLFGWSLDD+++EAA+++ +  D+
Sbjct: 304  VDDIVPFGSGPYLFLSYLEQCQLAITTSRKNVDNHIVLFGWSLDDKKNEAAILD-IGRDK 362

Query: 1150 WLPRIGLQDDEEDNLVMGFGLDKVSLYEKVEVMIGVEH-KELSPYCILLCLTLDGKLLMF 1326
            + PRI LQ++++DNL++G   DKVSLY KVE+ +G E  +ELSPYC+L CLTL+GKL+MF
Sbjct: 363  YRPRIELQENDDDNLILGLCCDKVSLYGKVEIQLGAEEPRELSPYCVLFCLTLEGKLVMF 422

Query: 1327 YVAGVEEIPDSPKTASTLSDGEDDSLPVLPVACDTSKTSSRFEEDREKGTVLYVKSPQKS 1506
             VA V   P   +  S L+  ED++    PV  D S+ ++  E   ++   + +K+   +
Sbjct: 423  QVASVTGTPAPTQDLSPLTGDEDETPAEAPVEHDQSREANTKEISIKQEGEILIKNDLNT 482

Query: 1507 QEELQTKGGGNILKESELQVTELNDFSKTSSHVDLSNKETGTNFSKLFGLAAENKGMLQP 1686
             +E ++     I  +   + T   D    S     + +  G        L  E  G    
Sbjct: 483  FQENKSLISACIADQILHKETIAADHEAKSLVNSQTFEADGQQRVSTIKLYQEVDGKQSG 542

Query: 1687 LSSKQESITFCDLAYTGPQSLISGRPXXXXXXXXXXXXXXXIDVFKDSSKLETQKTVFAS 1866
            L  +Q +        T P   +                    +V  D  K + QK +   
Sbjct: 543  LPRQQSTNLEGSSLKTSPLEGLG-------------------NVVGDVKKTDIQK-ITGV 582

Query: 1867 PNVVGTNSLSENIPSTVQSSYKDSLGSDVFSNDFSRNLQRDXXXXXXXXXXXXHKLSPSD 2046
             + +G++  S N   + ++     L   + S +     Q               KLS S 
Sbjct: 583  GSGLGSSQSSHNFSRSFET--HKELPGKIGSTNLQNASQSWSGGKFTFPKSTEEKLSLSS 640

Query: 2047 AF----KSRTASSEVNRVQHTGSRMGNTGQVTGSQSSSEIRYGNISNIKDPNAVLKFPVH 2214
            +F    +S TA   ++  Q  G  +G+   +    +++ +  GN                
Sbjct: 641  SFVESGRSETAGINLSIPQVPGGPVGS--PIYPKDAATSLAAGNF--------------- 683

Query: 2215 TSGKSTHTEGQKYPVGAAKLELELGISSSQVSPYGDSASNILPKFKLQPSQENLKNSQSS 2394
              G+ + + GQ+  + A  +E       SQ+S   +  +   P +K  P +EN +     
Sbjct: 684  --GRISQSRGQRGSMVAGNVEPISSTLGSQLSMQENFPAK-SPNYKSYPPKENYRTPPLQ 740

Query: 2395 RGTALERGLSKNFGNVNEMAKELDTLLADIEGDGGFRDACMLFQKDSVLGVEQDLENLAD 2574
                 E  LSK FGNV EMAKELDTLL  IEG GGFRDAC +FQK SV+ +EQ +  L++
Sbjct: 741  GQLNSEPNLSKQFGNVKEMAKELDTLLQCIEGPGGFRDACTIFQKSSVMELEQGIGTLSE 800

Query: 2575 RGRVWKNKVEEQLEGVQHLLDQTIQVLARRIYMEGIVKQASDTQYWDLWNRQKLTPELEL 2754
              R+W++ +++Q   + HLLD+T+QVLAR++YM+GIVKQA+D++YWDLW+RQKL  ELEL
Sbjct: 801  NCRMWRSIIDQQHGEIHHLLDKTVQVLARKVYMQGIVKQATDSRYWDLWSRQKLASELEL 860

Query: 2755 KRRQILKVNQDLTNQLVELERHFNTLELNRFSDSGGDSIGRRVLRGGSNPSRRTQAFSRL 2934
            KRR ILK+NQDLTNQL+ELERHFN +ELN+F ++GG+ +GRR L+  S PSR  Q+   L
Sbjct: 861  KRRNILKINQDLTNQLIELERHFNAIELNKFGENGGNHVGRRALQSRSGPSRHMQSLHSL 920

Query: 2935 YNTMSSQLAAAEQLSECLTKQMSVLNIESPSAKRKLIAKELFDSIGLAYDGDSFKSPDVK 3114
            +NTM+SQLAAAEQLSECL+KQM++L+I+S + K++ + KELF++IG+ YD  S  SP + 
Sbjct: 921  HNTMNSQLAAAEQLSECLSKQMTMLSIDS-TVKKQNVKKELFEAIGIPYDSASVSSPTIS 979

Query: 3115 KVVHSPESLNKVPFSSASSAIKEQSWRNPSSVVKSFEPETA-RRRVSLDRSWASFEPPKT 3291
                +P   N +   S+SSA K+QS RN  S +KS+EPET  RRR SL +SWA+FEPPKT
Sbjct: 980  NTSDTPSMKNFL--VSSSSANKDQSRRNQLSALKSYEPETVRRRRDSLGQSWANFEPPKT 1037

Query: 3292 TVKRMLLQEEHSKPTANKSPLMINKEGL---KQSPSLHSYVNSNQSSRFQLQAEQD---- 3450
             VKRM+L EE  K   NK    ++K      K   S  +Y N+N +    L   ++    
Sbjct: 1038 IVKRMVL-EEQQKVGVNKPSFSVDKRQFSPHKLEGSAFAYSNNNTTPSAFLYPSRNKGIH 1096

Query: 3451 --NLSKASKQNSPTSFKWSNNLSGTSQSL--KSSVMQVTQRSNXXXXXXXXXXXXXXXEV 3618
              +  +AS   S + F+W+N+ SG SQS   +S        +N                 
Sbjct: 1097 EISAKQASYSPSTSLFRWANDPSGPSQSFGSRSPTPHALPGNNLSAFSSLSAPQSSPVVD 1156

Query: 3619 QINKPGTFGLVSDRSTIGMGRANQSEYSQVQPISFSNATSKLPLESSSNQTSSTTIHVPS 3798
            Q N   T  L ++RS+ G+    +S+      +S +   S L  ES   QT   +  +P+
Sbjct: 1157 QSNAMETCNLTNERSSSGVTFVEKSD-----AVSINETKSTLLSESHLPQTPIISTSLPA 1211

Query: 3799 QILASPNESSVSKLSNVNHGDTAQAKAKSSSMNCPEVSQEDSVTVPVKSLNSQFSLFSS- 3975
            + L  P     +++SN N   T  AK    S+    VS   S +   +S  S FS  S+ 
Sbjct: 1212 RTL--PLTKKPNEMSNSNGKGTVLAKPTIGSVKQKPVSPGSSFS---QSGVSPFSPISAV 1266

Query: 3976 -PAVSSHEKCSQPINNEAQPGVSLRKTXXXXXXXXXXXXXXXXXXEATINPSIDANKKXX 4152
             PA S   K  Q ++     G S  +                      + PS  +  +  
Sbjct: 1267 QPAPSLPGKVFQ-LDIAKSKGQSCEEV-----------PPSPALSSPFLVPSSSSVIESS 1314

Query: 4153 XXXXXXXXXXXXXXXXXXXXXXXQATNQQVHPSTNVKLEVQPTELKPVIPPMEPKPTISG 4332
                                       + + PS +  L +    L+  +     +  +  
Sbjct: 1315 AVSQSSLPMPSTVPTSSAAVSFSSQAQETLVPSPSTSLNLTSASLQTSL-----QSPLGK 1369

Query: 4333 LSTKFDVDTTSQPEPQSGK-----FNFSPETAVAPAPADVSTTIVATDRKNGSPDLT--A 4491
             S+K DV++ SQ  PQ  K     F+   E +V  A    S+T +A+        L   A
Sbjct: 1370 FSSKSDVNSASQVPPQQSKTPTREFSLKLEPSVPSASKIESSTGLASGNLPSFNSLASHA 1429

Query: 4492 TQEDEMEEEASDPTANXXXXXXXXXXXXAAPTS------AAPKSNPFGLTFPNTA----- 4638
            +    M  +     A+            AA +          + +      P T+     
Sbjct: 1430 SNVTTMNAKPEQLPADGALQAHPLISGSAAGSKNESLDVTVTQEDEMEEEAPETSQATEL 1489

Query: 4639 -ANPASSPFNLTVPSGELFRPASFSLQ--QPSQP---ANMSAFS----SHFTVPEPTKSF 4788
              NPAS+PF +TVPSGELFRPASF+ Q  QPSQP    N+ AFS    +  T   P +S 
Sbjct: 1490 RTNPASTPFTMTVPSGELFRPASFNFQSPQPSQPPQSTNLGAFSGGINAGITAQAPARSG 1549

Query: 4789 FXXXXXXXXXXXXXXSVLGAFGQSRQLGTSLP 4884
            F              SVLGAFGQSRQ G  LP
Sbjct: 1550 FGQLAQIGAGQQALGSVLGAFGQSRQFGAGLP 1581


>ref|XP_002523390.1| nuclear pore complex protein nup153, putative [Ricinus communis]
            gi|223537340|gb|EEF38969.1| nuclear pore complex protein
            nup153, putative [Ricinus communis]
          Length = 1824

 Score =  784 bits (2024), Expect = 0.0
 Identities = 605/1770 (34%), Positives = 866/1770 (48%), Gaps = 169/1770 (9%)
 Frame = +1

Query: 79   EEEKSIIQ-----LDEEVEGDLKELEDLFFKKIGHSIPL---KPQPFSFDLQNPPTHPLA 234
            E+E+S+IQ     ++++VEGD  +  D FF +IG  IP+   + +   FDLQ+PP+ PLA
Sbjct: 4    EDEESLIQARKIEIEQDVEGDRVDSGDYFFNRIGKPIPILNDQSESPLFDLQSPPSSPLA 63

Query: 235  VSESPPALFLAHSQGFYVVRTKDVIQGAKERKGC--CIEEMSVVNVQIGRVHIVAVSRDC 408
            VS     +FL HS GFYV RTKDV+  A+E KG   CI+++S+ +V IG+ HI+++S D 
Sbjct: 64   VSPQHGLIFLVHSSGFYVARTKDVMDAAEEIKGTSPCIQDLSIADVPIGKPHILSLSFDS 123

Query: 409  STLAACVGAKIYFFAIESLLNKEQEPLYSCSIDE-SSYVRDFRWRKKKSKTSFVVLSRNG 585
            STL   V A ++FF ++SLLNKE +P +SCS+ E +S+V+DF+WR++ S +S+++LS +G
Sbjct: 124  STLVVTVAAHLHFFLVDSLLNKEVKPFFSCSLSEPTSFVKDFKWRRR-SDSSYLLLSNHG 182

Query: 586  KLYHGD-LDIPLKEVMDNVDAVDWSTEGNCIAVAKTNYLSIFSSRFRERFTLSIPLSSCV 762
             LYH   LD PLK VMD+VDAV+WS +G  +AVAK + L I SS F+ER  LS+P  S +
Sbjct: 183  NLYHAAVLDSPLKLVMDDVDAVEWSLKGTYLAVAKAHILHILSSNFKERLRLSLPFKSWI 242

Query: 763  GDTDSKCTVKVDSINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDGKISEVS------ 924
             D+D  C+VKVDSI WVR D IV+GC   T DGKE+ YL+Q+I SKDGKI++VS      
Sbjct: 243  ADSDDSCSVKVDSIRWVRPDSIVVGCFQQTADGKEENYLVQVIRSKDGKITDVSVSFVAL 302

Query: 925  --SKPVVLSFDRAFAAIDDDMMPFGSGPHLFMNYLEHRELALVANRKNRDQHIVLFGWSL 1098
               KP VLS+   F+ + DD++P+G+GP+L ++YL    LA+ ANRKN DQH++L  WS+
Sbjct: 303  DLKKPSVLSYYDLFSGLIDDILPYGNGPYLLLSYLHECGLAITANRKNTDQHVLLLCWSV 362

Query: 1099 DDEQDEAALVELVQEDRWLPRIGLQDDEEDNLVMGFGLDKVSLYEKVEVMIGVEHKELSP 1278
            +D   E A+V+ +  D W+PRI LQ + +DNL+MGF +D VS+Y KVEV +G+E +ELSP
Sbjct: 363  EDGMSETAIVD-IDRDTWIPRIELQGNGDDNLIMGFSVDNVSIYAKVEVEVGLEQRELSP 421

Query: 1279 YCILLCLTLDGKLLMFYVAGVEEIPDSPKTASTLSDGEDDSLPVLPVACDTSKTSSRFEE 1458
            +C+L C+TL+GKL+MFYVA        P   S L D E+DSL   P +      S+    
Sbjct: 422  FCVLFCVTLEGKLVMFYVASAAGTTLPPDADSALDDEEEDSL---PESLAGRVQSNILSG 478

Query: 1459 DREKGTVLYVKSPQKSQEELQTKGGGNILKESELQVTELNDFSKTSSHVDLSNKETGTNF 1638
              +    L V    K + ++         K SEL           S++ DL + +T ++ 
Sbjct: 479  PEQVALGLQVNDVSKREPDVS--------KGSEL-----------STNKDLPSGDTRSSM 519

Query: 1639 SKLFGLAAENKGMLQPLSSKQESITFCDLAYTGPQSLISGRPXXXXXXXXXXXXXXXIDV 1818
            + L      +KG     S  QE+           +S+++ +P                 V
Sbjct: 520  TALITEQKPHKGAT---SEAQEA-----------ESVLNSKP----------------SV 549

Query: 1819 FKDSSKLETQKTV----FASPNVVGTNSLSENIPSTVQSSYKDSLGSDVFSNDFSRNLQR 1986
            F    K  T K        S    GT S  E  P          L         S NL +
Sbjct: 550  FDCQDKASTTKMYQDNKIFSEFRPGTASFLEKAPPVPSQVNGKGLQK-------SANLPK 602

Query: 1987 DXXXXXXXXXXXXHKLSPSDAFKSRTASSEVNRVQHTGSRMGNTGQVTGSQSSSEIRYGN 2166
            D               +PS  + S                 G +   T + +S+ I+   
Sbjct: 603  DSRVIFGSPGLHG---APSQPWSSEKVICS-----------GGSDSKTSALTSTLIQGHK 648

Query: 2167 ISNIKDPNAVLKFPVHTSGKSTHTEGQKYPVGAAKLELELGISSSQVSPYGDSASNILPK 2346
              N          P++ +GK  H +G      +A   +    +  Q +  G    ++LP 
Sbjct: 649  SDNTGLSVDAANVPLNLAGKPFHLKGNIGDTPSANFSVRPTHTVVQKAKTG--MIDLLPS 706

Query: 2347 FKLQ--PSQENLKNSQSS-----------RGTALERG---LSKNFGNVNEMAKELDTLLA 2478
             +    PSQE+L   +S            +  +L +    LS+ FGN+ EMAKELD+LL 
Sbjct: 707  IRSSQLPSQESLALGRSGNRWPYSSKDAHKAPSLSKSEPYLSRQFGNIKEMAKELDSLLE 766

Query: 2479 DIEGDGGFRDACMLFQKDSVLGVEQDLENLADRGRVWKNKVEEQLEGVQHLLDQTIQVLA 2658
             IE  GGF+DAC + Q+ SV  +E+ ++ L+++   WK+ ++EQL  VQHLLD+T+QVLA
Sbjct: 767  CIEEPGGFKDACTISQRGSVEALEERMQTLSEKCITWKSMMDEQLGEVQHLLDKTVQVLA 826

Query: 2659 RRIYMEGIVKQASDTQYWDLWNRQKLTPELELKRRQILKVNQDLTNQLVELERHFNTLEL 2838
            R+IYM+GIVKQASD++YW+LWNRQKL  E ELKRR ILK+NQ LTNQL++LERHFNTLEL
Sbjct: 827  RKIYMDGIVKQASDSRYWELWNRQKLGSEFELKRRHILKLNQVLTNQLIDLERHFNTLEL 886

Query: 2839 NRFSDSGGDSIGRRVLRGGSNPSRRTQAFSRLYNTMSSQLAAAEQLSECLTKQMSVLNIE 3018
            ++F ++GG   GRR  +    PSR+ Q+   LYNT +SQLAAAE LSECL+KQM+VL++E
Sbjct: 887  HKFDENGGVPKGRREFQSRHGPSRQIQSLHSLYNTTNSQLAAAEHLSECLSKQMAVLSVE 946

Query: 3019 SPSAKRKLIAKELFDSIGLAYDGDSFKSPDVKKVVHSPESLNKVPFSSAS---------- 3168
            SP  K+K I KELF++IG+ Y+  +F SPD  KV  S  S+  +   SAS          
Sbjct: 947  SP-VKQKNIKKELFETIGIPYE-TTFSSPDSTKVGDSSSSMKLLLSGSASNKSQSRRRQL 1004

Query: 3169 ----SAIKEQSWRNPSSVVKS---FEPE-TARRRVSLDRSWASFEPPKTTVKRMLLQEE- 3321
                S+  E + R   S+ +S   FEP+ T  +RV L  +  +     + + R  L    
Sbjct: 1005 SVMKSSDSETARRRRDSLDQSWASFEPKKTTVKRVLLQETQKTSVSKSSLMDRQQLDNSV 1064

Query: 3322 -------HSK----------PTANKS-PLMINKEGLKQSPSLHSYVNSNQSSRFQLQAEQ 3447
                   H K          P+ NK       K+ L + P+   +  S+     Q  A+ 
Sbjct: 1065 VDSSAVNHPKDLTPPSTLTYPSGNKGIQFTFQKQALDKKPTPSRWA-SDSLPPSQSTAQA 1123

Query: 3448 DNL-------SKASKQNSP--------------TSFKWSNNLSGT-------------SQ 3525
              L         A    SP              T    S+ LSGT             S+
Sbjct: 1124 TGLRPPMLGSGAALPSISPYQALPITGQILSRETGIVTSDELSGTGSTGKSDSLLTHESK 1183

Query: 3526 SLKSSVMQVTQRSNXXXXXXXXXXXXXXXEVQIN-KPGTFGLVSDRSTIGMGRANQSEYS 3702
            S++ S   + ++S+                  +N      G  + R          ++ +
Sbjct: 1184 SIQQSETNLHKKSSVSMELPAQAPTLMKSNEMLNCNAKGAGFANSRMATMSHVPTNTKGA 1243

Query: 3703 QVQPISFSNATSKLPLESSSNQTSSTTIHVPSQILAS----PNESSVSKLSNVNHGDTAQ 3870
             ++  S SN TS   L S+S   SS    VP   +A+    P+E + S  +       + 
Sbjct: 1244 FLKSHSISNETSFSLLTSASPLVSSHPGTVPQFSVAASRSQPSEKASSSQAFSMPLSFSS 1303

Query: 3871 AKAKSSSMNCPEVSQEDSVTVPVKSLNSQFSLFSSPAVSSHEKCSQ----PINNEAQPGV 4038
            +   +SS     ++ +D V      L + FS  SSP   S     Q    P+     P V
Sbjct: 1304 SPVINSSFGISLINSKDKVDATQTVLMTPFSSVSSPVFPSGSFSLQAPKSPLPMHTPPAV 1363

Query: 4039 S-LRKTXXXXXXXXXXXXXXXXXXEATINPSIDANKKXXXXXXXXXXXXXXXXXXXXXXX 4215
            S  RKT                    + +   +A +                        
Sbjct: 1364 SESRKTELQSATDKMPPPVNPALRSISESVKTEA-QIPTVNTSLPNSPTPSPSVSISHKP 1422

Query: 4216 XXQATNQQVHPSTNVKLEVQPTELKPVIPPMEPKPTISGLSTKFDVDTTS-----QPEPQ 4380
              Q+   +  PST       P   +P    ++P      LS KF+  TT+     QPEP 
Sbjct: 1423 GLQSPTSKTSPSTG---PTSPLTSEPSKSQLQP------LSDKFNSGTTTTAPKTQPEPP 1473

Query: 4381 SGKFNFSPETAVAPAPA-DVSTTI-----------------------------VATDR-- 4464
            +  F+   ET V+  PA ++ST +                             +A+D   
Sbjct: 1474 A--FSLKLETPVSSVPASEISTGLGSGSQSSLNSMASPASGIQLNVQPTFGAPLASDSMA 1531

Query: 4465 --KNGSPDLTATQEDEMEEEASDPTANXXXXXXXXXXXXAAPTSAAPKSNPFGLTFPNTA 4638
              KN + DL  T+EDEMEEEA +  +             + P S AP++NPFG    N  
Sbjct: 1532 SGKNANMDLAVTEEDEMEEEAPE-ASRTNEISLGSFGLGSTPASTAPRANPFG----NIV 1586

Query: 4639 ANPASSPFNLTVPSGELFRPASFSLQ-----QPSQPANMSAFSSHF----TVPEPTKSFF 4791
             N ASS F +TVPSGELF+PASFS Q     QPS P+NM  FS  +        P  + F
Sbjct: 1587 TNQASSSFTMTVPSGELFKPASFSFQSPLPLQPSPPSNMGTFSGGYAANAVAQAPAPNAF 1646

Query: 4792 XXXXXXXXXXXXXXSVLGAFGQSRQLGTSL 4881
                          SVLG+FGQSRQ G  L
Sbjct: 1647 AQPAQMGAGQQALGSVLGSFGQSRQFGAGL 1676


>ref|XP_003526034.1| PREDICTED: uncharacterized protein LOC100806517 [Glycine max]
          Length = 1744

 Score =  762 bits (1967), Expect = 0.0
 Identities = 578/1677 (34%), Positives = 862/1677 (51%), Gaps = 88/1677 (5%)
 Frame = +1

Query: 109  EEVEGDLKELEDLFFKKIGHSIPLKPQPFSFDLQNPPTHPLAVSESPPALFLAHSQGFYV 288
            EEVEG++    D FF K+G ++PLK     FD +  P+ PLA+SE     F+AHS GF+V
Sbjct: 10   EEVEGEIIGTTDYFFVKVGEALPLKSSDSVFDAETLPSQPLALSERFRLTFVAHSSGFFV 69

Query: 289  VRTKDVIQGAKERK----GCCIEEMSVVNVQIGRVHIVAVSRDCSTLAACVGAKIYFFAI 456
             +TKD+I  AKE K    G  +E++S+V+V +GRV  +A+S D STLAA V   I F+++
Sbjct: 70   AKTKDLIDSAKELKDKGSGSPVEQLSLVDVPVGRVRALALSTDNSTLAASVSGDIRFYSV 129

Query: 457  ESLLNKEQEPLYSCSIDESSYVRDFRWRKKKSKTSFVVLSRNGKLYHGDLDIPLKEVMDN 636
            ES LNKE +  +SCS+++S++V+D RW     K S+VVLS  GKLY+GD+  PLK VMDN
Sbjct: 130  ESFLNKEVKQSFSCSLNDSTFVKDMRWITTP-KHSYVVLSNIGKLYYGDIGFPLKHVMDN 188

Query: 637  VDAVDWSTEGNCIAVAKTNYLSIFSSRFRERFTLSIPLSSCVGDTDSKCTVKVDSINWVR 816
            VDAVDW  +G+ +AVA  + LSI S++F ER ++S+   S +GD  +  ++KVDS+  VR
Sbjct: 189  VDAVDWGLKGSFVAVASKSVLSILSTKFEERVSISLSFRSWIGDFAADGSIKVDSVKCVR 248

Query: 817  EDCIVLGCVLVTEDGKEDGYLIQIISSKDGKISEVSSKPVVLSFDRAFAAIDDDMMPFGS 996
             D IV+GCV +TEDGKE+ YLIQ+I S+ G+I++  S+ VV SF   +  + DD++PFGS
Sbjct: 249  PDSIVIGCVQLTEDGKEENYLIQVIRSQLGEINDDCSELVVQSFCDIYQGLIDDIVPFGS 308

Query: 997  GPHLFMNYLEHRELALVANRKNRDQHIVLFGWSLDDEQDEAALVELVQEDRWLPRIGLQD 1176
            GP+L + YL+  +LA+ AN KN DQHI+L GWS D+++ EA ++++ +E+  +PRI LQ+
Sbjct: 309  GPYLLLAYLKQCQLAINANMKNTDQHIMLLGWSADEDKSEAVVIDIEREN-CVPRIELQE 367

Query: 1177 DEEDNLVMGFGLDKVSLYEKVEVMIGVEHK-ELSPYCILLCLTLDGKLLMFYVAGVEEIP 1353
            + +DNL++G  +D VS+Y+KV V I VE + EL P+C+L+CLTL+GKL+MF+VA +    
Sbjct: 368  NGDDNLLLGLCIDNVSIYQKVGVQIDVEERTELLPHCVLICLTLEGKLVMFHVASLAGCK 427

Query: 1354 DSPKTASTLSDGEDDSLPVLPVACDTSKTSSRFEEDREKGTVLYVKSPQKSQEELQTKGG 1533
             SP+  S L + ED              TS    ED  +G  L  +  QK + +   +  
Sbjct: 428  TSPEIDSVLHNDED--------------TSVNLHED--EGCTL-PQGLQKQESDKTFEVS 470

Query: 1534 GNILKESELQVTELNDFSKTSSHVDLSNKETGTNFSK--LFGLAAENKGMLQPLSSKQES 1707
            GN+  +      ++                T TN+++  L G +   K  +Q +    ++
Sbjct: 471  GNLTAKPSGNPQQIT--------------RTDTNYTEVELVGNSESLKSNVQQVVPDVDA 516

Query: 1708 ITFCDLAYTGPQS-LISGRPXXXXXXXXXXXXXXXIDVFKDSSKLETQKTVFASPNV--- 1875
            I       TG Q+  + G                      +  K   QKT     ++   
Sbjct: 517  IQ-----NTGNQNPFLPG----------------------EQQKNLGQKTATLGTSIGSL 549

Query: 1876 -VGTNSLSENIPSTVQSSYKDSLGSDVFSNDFSRNLQRDXXXXXXXXXXXXHKLSPSDAF 2052
             V ++S+S  + S            ++++ + SR+ QR             + +S     
Sbjct: 550  MVNSHSVSSGLSSYNNLQSTTEKTRELWTANSSRDSQRASLPGETFSFPKKYDVS----- 604

Query: 2053 KSRTASSEVNRV--QHTGSRMGNTGQVTGSQSSSEIRYGNISNIKDPNAVLKFPVHTSGK 2226
             S +ASS  + V  Q+    MG T  V GS     I   +++++          + ++ +
Sbjct: 605  -SISASSYADGVGFQNKKYTMGATN-VPGSMGGKPILVQDVNDVSPA-------IDSASR 655

Query: 2227 STHTEGQKYPVGAAKLELELGISSSQVSPYGDSASNILPKFKLQPSQENLKNSQSSRGTA 2406
               + GQ   + A  ++  L  SSS+ S  G+ A+      K  PS E  ++   S+   
Sbjct: 656  LVQSGGQLSTLVAGNMQPILN-SSSRFSSDGNIAAVKSSARKFLPSNE--QHGTPSKLGI 712

Query: 2407 LERGLSKNFGNVNEMAKELDTLLADIEGDGGFRDACMLFQKDSVLGVEQDLENLADRGRV 2586
                LSK FGN+NEM KELD LL  +E  GGFRDAC    + S+  VEQ ++ L+ + ++
Sbjct: 713  FGSDLSKQFGNINEMTKELDLLLKSVEETGGFRDACTRSLRSSIEAVEQGMDALSKKCKI 772

Query: 2587 WKNKVEEQLEGVQHLLDQTIQVLARRIYMEGIVKQASDTQYWDLWNRQKLTPELELKRRQ 2766
               +V+E  E V +LL++TI+ +AR+IYMEGI KQASD++YWDLWNRQKL  ELELKR+ 
Sbjct: 773  LTCQVDEHHEEVHYLLNKTIRAMARKIYMEGIYKQASDSRYWDLWNRQKLNSELELKRQH 832

Query: 2767 ILKVNQDLTNQLVELERHFNTLELNRFSDSGGDSIGRRVLRGGSNPSRRTQAFSRLYNTM 2946
            IL +NQDLT QL+ELERHFN LELN+FS  GG  IG    +    PSR T +   L+N++
Sbjct: 833  ILSLNQDLTYQLIELERHFNALELNKFSQYGGRCIGHGPSQNRYGPSRHTLSLHSLHNSV 892

Query: 2947 SSQLAAAEQLSECLTKQMSVLNIESPSAKRKLIAKELFDSIGLAYDGDSFKSPDVKKVVH 3126
            SSQL AAE LSECL+KQM  L+++S + +RK + KELF++IG+ Y+  +F SPD+K  + 
Sbjct: 893  SSQLVAAENLSECLSKQMEALSLKSQTEERKNV-KELFETIGIPYEA-AFGSPDMKGFMK 950

Query: 3127 SPESLNKVPFSSASSAIKEQSWRNPSSVVKSFEPETA-RRRVSLDRSWASFEPPKTTVKR 3303
            +P S  K    S  +A K+QS RN +S +KSFEPETA RRR SLD+SW  FEPPKT VKR
Sbjct: 951  TPPS--KKTLFSDLTANKDQSRRNQASAMKSFEPETARRRRDSLDQSWTCFEPPKTIVKR 1008

Query: 3304 MLLQEEHSKPTANKSPLMINKE----GLKQS---------PSLHSYVNSNQSSRFQLQAE 3444
            MLLQ E  +   N+S   +NK+     L++S         PS+    ++ ++S      E
Sbjct: 1009 MLLQ-ELQQVNRNESLFSMNKDKKVSTLEESSPRHIDARIPSIVFPASNIKASILDSHLE 1067

Query: 3445 QDNLSKASKQNSPTSFKWSNNLSGTSQSLKSSVMQVTQRSNXXXXXXXXXXXXXXXEVQI 3624
             + +S+ SK     +F  +++L   +  L+S    V Q++N                V+ 
Sbjct: 1068 LEEVSEHSK-----AFMPADSLRAPTHVLESK-SSVLQKNNILTIPSQPAFHLSPTMVRG 1121

Query: 3625 NKPGTFGLVSDRSTI-GMGRANQSE-----------------YSQVQPISFSNATSKLPL 3750
            +   T  L +++ST+      + SE                 YS  +  S    +S++P 
Sbjct: 1122 HSTETKDLAAEKSTVQKFDLISNSENKPTLLWKLPQNPSIPTYSTTETPSMKIKSSEMPF 1181

Query: 3751 ESS--SNQTSSTTIHVPSQILASPN-----ESSVSKLSNVNHGDTAQAKAKSSSMNCPEV 3909
             +S  +  +SSTT    S      +      SS S LS ++   T   K     ++   +
Sbjct: 1182 PNSKMTMASSSTTGDKLSSSFTPESWGKDFPSSGSHLSTISAPSTFLGKVTEFHVD-KSL 1240

Query: 3910 SQEDSVTVPVKSLNSQFSLFSSPAVSSHEKCSQPINNEAQPGVSLRKTXXXXXXXXXXXX 4089
             +E+   VP  +    F   S P + +    S    + A   V+                
Sbjct: 1241 PKENIPAVP--TFGGSFKSLSFPTIKTSPSPSSSSVSSAAVSVASSSLTSSNTSTDSNRV 1298

Query: 4090 XXXXXXEATINPSIDANKKXXXXXXXXXXXXXXXXXXXXXXXXXQATNQQVHPSTNVKLE 4269
                   A ++ S  A K                          ++   ++ P+  +K +
Sbjct: 1299 MSSSSTSAFLHLSNQAPK----------DTVPSLPNPPGLKLTLESLKSEIPPAAALKSD 1348

Query: 4270 VQPTEL-----------KPVIPPMEPKPTISGLS---TKFDVDTTSQP--EPQSGKFN-F 4398
            +QP  +           + V  P EP    S L    ++    T  QP     S   N  
Sbjct: 1349 MQPAAVSNSKTVLDASAEVVTRPNEPLNGASELKLGPSRNYSPTIEQPFNNTTSSDLNVV 1408

Query: 4399 SPETAVAPAPA--DVSTTIVA----TDRKNGSPDLTATQEDEMEEEA---SDPTANXXXX 4551
            S   A  P+ A   +ST+ ++    ++ KN   D   + EDEMEEEA   S+ T      
Sbjct: 1409 SVSQAAQPSDASLQLSTSFLSSASVSNGKNEGLDFGISHEDEMEEEAPETSNNTTELSLG 1468

Query: 4552 XXXXXXXXAAPTSAAPKSNPFGLTFPNTAANPASSPFNLTVPSGELFRPASFSL-----Q 4716
                    ++P  + PK+NPFG +F N   + +SS    +VPSGELF+PASF+       
Sbjct: 1469 SFGGFGISSSPNPSMPKTNPFGGSFNNVGTSLSSSTVTFSVPSGELFKPASFNFSSPQSS 1528

Query: 4717 QPSQPANMSAFSSHF----TVPEPTKSFFXXXXXXXXXXXXXXSVLGAFGQSRQLGT 4875
             P+Q  N  AFS  F     VP      F              SVLG FGQSRQLG+
Sbjct: 1529 SPTQTTNSGAFSGGFNAVAAVPAQAPGGFGQPAQIGSGQQVLGSVLGGFGQSRQLGS 1585


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score =  716 bits (1848), Expect = 0.0
 Identities = 501/1373 (36%), Positives = 735/1373 (53%), Gaps = 59/1373 (4%)
 Frame = +1

Query: 91   SIIQLDEEVEGDLKELEDLFFKKIGHSIPLKPQPFSFDLQNPPTHPLAVSESPPALFLAH 270
            S ++++E+ EGD     D +F++IG  I +K     +DL+NPP+ PLA+SE    LF+AH
Sbjct: 2    SRVEIEEDTEGDRISTNDYYFERIGEPISIKEDDAQYDLENPPSQPLAISERHAVLFVAH 61

Query: 271  SQGFYVVRTKDVIQGAKERKG----CCIEEMSVVNVQIGRVHIVAVSRDCSTLAACVGAK 438
            S GF+V RT DVI  +K   G      I+++S+V+V +G V I+++S D S LA  V A 
Sbjct: 62   SSGFFVGRTNDVISASKNSNGNGDKVFIQDLSLVDVPVGDVRILSLSADDSILAVTVAAD 121

Query: 439  IYFFAIESLLNKEQEPLYSCSIDESSYVRDFRWRKKKSKTSFVVLSRNGKLYHGDLDIPL 618
            I+FF+++SLL K+ +P +S S DES +V+DFRWR+   K S++VLS  GKL+HG  + P 
Sbjct: 122  IHFFSVDSLLKKDAKPSFSYSPDESGFVKDFRWRRN-DKHSYLVLSNTGKLFHGIDNAPP 180

Query: 619  KEVMDNVDAVDWSTEGNCIAVAKTNYLSIFSSRFRERFTLSIPLSSCVGDTDSKCTVKVD 798
            + VMD VDAV+WS++G+ IAVA+ N L IFSS+F E+  +++   S +GD+D  C VKVD
Sbjct: 181  RHVMDAVDAVEWSSKGSYIAVAQDNSLRIFSSKFNEKRCIALSFDSWIGDSDEDCFVKVD 240

Query: 799  SINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDGKISEVSSKPVVLSFDRAFAAIDDD 978
            SI WVR +CI+LGC  + E G+E+ YL+Q+I S DGKIS+ S+  V LSF   F    DD
Sbjct: 241  SIRWVRNNCILLGCFQLIE-GREENYLVQVIRSPDGKISDGSTNLVALSFSDLFPCSMDD 299

Query: 979  MMPFGSGPHLFMNYLEHRELALVANRKNRDQHIVLFGWSLDDEQDEAALVELVQEDRWLP 1158
            ++P G GPHL  +Y++  +LA+ ANRK+ D+HIVL  WS  D++   ++V+ +  + +LP
Sbjct: 300  LVPVGVGPHLLFSYIDQCKLAVTANRKSIDEHIVLLDWSSGDDKSAVSVVD-IDRETFLP 358

Query: 1159 RIGLQDDEEDNLVMGFGLDKVSLYEKVEVMIG-VEHKELSPYCILLCLTLDGKLLMFYVA 1335
            RIGLQ++ +DN VMG  +D+VS+   V V  G  E KEL PY +L+CLTL+GKL+MF VA
Sbjct: 359  RIGLQENNDDNTVMGLCIDRVSIEGTVNVRSGDDELKELQPYFVLVCLTLEGKLVMFNVA 418

Query: 1336 GVEEIPDSPKT-ASTLSDGEDDSLPVLPVACDTSKTSSRFEEDREKGTVLYVKSPQKSQE 1512
             V   P S  T  ++ SD ED   P+  +  D SK SS      EK   L + + Q  Q+
Sbjct: 419  SVAGRPASSDTDLASSSDIEDAYTPL--IEDDLSKQSS------EKHQQLNI-AVQNDQK 469

Query: 1513 ELQTKGGGNILKESELQVTELNDFSKTSSHVDLS-----NKETGTNFSKLFGLAAENKGM 1677
             L T+        +E ++   N FSK    V  S     NK+      K   +    + M
Sbjct: 470  HLNTE-----KFSTEQRLPNENIFSKEFESVKSSVSGDNNKKQEPYAEKPLQVEDAQQSM 524

Query: 1678 LQPLSSKQESITFCDLAYTGPQSLISGRPXXXXXXXXXXXXXXXIDVFKDSSKLETQKTV 1857
            +  LS          L Y   +    G                       S KL  QK +
Sbjct: 525  IPRLSGTSFGQLPMSLGYDTNKFAGFG------------------PALPVSEKL--QKDI 564

Query: 1858 FASPNVVGTNSLSENIPSTVQSSYKDSLGSDVFSNDFSRNLQRDXXXXXXXXXXXXHKLS 2037
            FA  N   +  L  N+ S   +++    GS    N   ++ Q                +S
Sbjct: 565  FAQSN---SMHLQANVESKSTAAF---FGSPGLQNAILQSPQN----TSSQPWSSGKSVS 614

Query: 2038 PSDAFKSRTASSEVNRVQHTGSRMGNTGQVTGSQSSSE-----IRYGNISNIKDPNAVLK 2202
            P D       S  +   QH  S    TG V    S  +     I  G +S + + + +L 
Sbjct: 615  PPDFVSGPFPS--MRDTQHKQSVQSGTGYVNPPMSIKDKSVQVIETGRVSALSNLSPLL- 671

Query: 2203 FPVHTSGKSTHTEGQKYPVGAAKLELELGISSSQVSPYGDSASNILPKFKLQPSQENLKN 2382
                        + Q    G  K+E    I +SQ+S        +   F+   S +  K 
Sbjct: 672  -----------GQNQDTNEGVEKIEPIPSIRASQLS------QQVKSSFEKSASHQQHKT 714

Query: 2383 SQSSRGTALERGLSKNFGNVNEMAKELDTLLADIEGDGGFRDACMLFQKDSVLGVEQDLE 2562
              S+    LE  +S    N+NEMA+E+DTLL  IEG GGF+D+C    K +V  +EQ LE
Sbjct: 715  PLSTGPLRLEHNMSNQPSNINEMAREMDTLLQSIEGPGGFKDSCAFILKSNVEELEQGLE 774

Query: 2563 NLADRGRVWKNKVEEQLEGVQHLLDQTIQVLARRIYMEGIVKQASDTQYWDLWNRQKLTP 2742
            +LA + + WK+ + EQ   +QHLLD+TIQVLA++ YMEG+ KQ +D QYW LWNRQKL P
Sbjct: 775  SLAGKCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNP 834

Query: 2743 ELELKRRQILKVNQDLTNQLVELERHFNTLELNRFSDSGGDSIGRRVLRGGSNPSRRTQA 2922
            ELE KR+ I+K+N+DLT+QL+ELER+FN LEL+R+++ GG  + RR +   S PSRR Q+
Sbjct: 835  ELEAKRQHIMKLNKDLTHQLIELERYFNRLELDRYNEDGGHPVARRGVPNRSAPSRRVQS 894

Query: 2923 FSRLYNTMSSQLAAAEQLSECLTKQMSVLNIESPSAKRKLIAKELFDSIGLAYDGDSFKS 3102
               L+NTMSSQLAAAEQLSECL+KQM+ L I+SP   +K + +ELF++IG+ YD  SF S
Sbjct: 895  LHSLHNTMSSQLAAAEQLSECLSKQMTYLKIDSP--VKKNVKQELFETIGIPYDA-SFSS 951

Query: 3103 PDVKKVVHSPESLNKVPFSSASSAIKEQSWRNPSSVVKSFEPETA-RRRVSLDRSWASFE 3279
            PD  K  ++  + N +  SS  ++I +QS +  SS +K+ +PETA RRR SLDR+WA+FE
Sbjct: 952  PDAVKAKNASSAKNLL-LSSIPASINQQSRQRQSSAMKNSDPETARRRRESLDRNWAAFE 1010

Query: 3280 PPKTTVKRMLLQEEHSKPTANKSPL---MINKEGLKQSPSLHSYVNSN---QSSRFQLQA 3441
            PPKTTVKRMLLQE+       ++ L   + +    +    LH   +++    S++  +++
Sbjct: 1011 PPKTTVKRMLLQEQQKTGMNQQTVLSERLRSANNTQDRSLLHVKDHASPVVSSNKGIMES 1070

Query: 3442 EQDNLSKAS-----------KQNSP----------TSFKWSNNLSG--TSQSLKSSVMQV 3552
             Q + S+A            + NSP           SF WS N S   TS + +S+  Q+
Sbjct: 1071 FQQDTSEAQSTPFKTRPPMPQSNSPFTISPISASKPSFNWSGNKSSNTTSYAEESAPSQI 1130

Query: 3553 TQRSNXXXXXXXXXXXXXXXEVQINKPGTFGLVSDR---STI---GMGRANQSEYSQVQP 3714
                                   +++PG    +  R   ST+      +A + ++S+ + 
Sbjct: 1131 KDTRT------------------VSQPGGSSFLPKRPVASTVLEQTEKKAGEFKFSEAKA 1172

Query: 3715 ISF----SNATSKLPLESSSNQTSSTTIHVPSQILASPNESSVSKLSNVNHGDTAQAKAK 3882
             +F    + +  +L   SS +   S+          S    + S  S    G  + +   
Sbjct: 1173 NAFVETAAGSVQRLSTTSSGSDFESSKGFGAQFSTMSSGAPASSFSSKSLFGFNSSSSIP 1232

Query: 3883 SSSMNCPEVSQEDSVTVPVKSLNSQFSLFSSPAVSSHE---KCSQPINNEAQP 4032
                  P V+   S T P+ S ++ F+  S+P  SS +     S PI++   P
Sbjct: 1233 GDKFTFPAVTAPLSGT-PLDSTSTLFTASSAPVSSSSQDPVPASIPISSAPVP 1284



 Score =  107 bits (267), Expect = 3e-20
 Identities = 84/236 (35%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
 Frame = +1

Query: 4222 QATNQQVHPSTNVKLEVQPTELK-----PVIPPMEPKPTISGLSTKFDVDTTSQPEPQ-S 4383
            Q+T   V  +T  + E  P + +       + P+     +SG S+       S   P  S
Sbjct: 1437 QSTVDSVANATKTQNEPLPVKSEISNPGTTVTPVSSSGFLSGFSSGTQSSLASMAAPSFS 1496

Query: 4384 GKFNFSPE---TAVAPAPADVSTTIVATDRKNGSPDLTATQEDEMEEEASDP--TANXXX 4548
               +  P+   +  AP PA   T+      K    D+  TQEDEM+EEA +   T     
Sbjct: 1497 WPGSSQPQQLSSTPAPFPASSPTSASPFGEKK---DIVDTQEDEMDEEAPEASQTTELSM 1553

Query: 4549 XXXXXXXXXAAPTSAAPKSNPFGLTFPNTAANPASSPFNLTVPSGELFRPASFSLQ--QP 4722
                     + P   APK+NPFG  F N A    S+PFN+TVPSGELF+PASF+ Q  QP
Sbjct: 1554 GSFGGFGLGSTPNPGAPKTNPFGGPFGN-ATTTTSNPFNMTVPSGELFKPASFNFQNPQP 1612

Query: 4723 SQPANMSAFSSHFTVPE--PTKSFFXXXXXXXXXXXXXXSVLGAFGQSRQLGTSLP 4884
            SQPA   +FS     P   P +S F              SVLG+FGQSRQ+G  LP
Sbjct: 1613 SQPAGFGSFS---VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLP 1665


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
            lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
            ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score =  714 bits (1842), Expect = 0.0
 Identities = 502/1376 (36%), Positives = 714/1376 (51%), Gaps = 76/1376 (5%)
 Frame = +1

Query: 91   SIIQLDEEVEGDLKELEDLFFKKIGHSIPLKPQPFSFDLQNPPTHPLAVSESPPALFLAH 270
            S ++++E++EGD     D +F+KIG  I +K     +D++NPP+ PLA+SE    +F+AH
Sbjct: 2    SKVEIEEDMEGDRISTNDYYFEKIGEPISIKEDDAQYDIENPPSQPLAISERHGVVFVAH 61

Query: 271  SQGFYVVRTKDVIQGAKERKG----CCIEEMSVVNVQIGRVHIVAVSRDCSTLAACVGAK 438
            S GF+V RTKDVI  +K   G      I+++S+V+V +G V I+++S D S LA  V A 
Sbjct: 62   SSGFFVGRTKDVISASKNSNGNGDKVYIQDLSLVDVPVGDVRILSLSADDSILAVTVAAD 121

Query: 439  IYFFAIESLLNKEQEPLYSCSIDESSYVRDFRWRKKKSKTSFVVLSRNGKLYHGDLDIPL 618
            I+FF+++SLL K+ +P +S S DES +V+DFRW +K  K S++VLS  GKL+HG  + P 
Sbjct: 122  IHFFSVDSLLKKDAKPSFSYSPDESGFVKDFRWIRK-DKHSYLVLSNTGKLFHGIDNAPP 180

Query: 619  KEVMDNVDAVDWSTEGNCIAVAKTNYLSIFSSRFRERFTLSIPLSSCVGDTDSKCTVKVD 798
            + VMD VDAV+WS++G+ IAVA+ N L I SS+F E+  +++     +GD+D  C+VKVD
Sbjct: 181  RHVMDAVDAVEWSSKGSYIAVAQDNSLRILSSKFNEKRCIALSFDDWIGDSDEDCSVKVD 240

Query: 799  SINWVREDCIVLGCVLVTEDGKEDGYLIQIISSKDGKISEVSSKPVVLSFDRAFAAIDDD 978
            SI WVR +CI+LGC  +  DG+E+ YL+Q+I S DGKIS+ SS  V LSF   F    DD
Sbjct: 241  SIRWVRNNCILLGCFQLI-DGREENYLVQVIRSPDGKISDGSSNLVALSFSDLFPCSMDD 299

Query: 979  MMPFGSGPHLFMNYLEHRELALVANRKNRDQHIVLFGWSLDDEQDEAALVELVQEDRWLP 1158
            ++P G GPHL  +Y++  +LA+ ANRK+ D+HIVL  WS  D +   ++V+ +  + +LP
Sbjct: 300  IVPVGVGPHLLFSYIDQCKLAVTANRKSIDEHIVLLDWSPGDNKTAVSVVD-IDRETFLP 358

Query: 1159 RIGLQDDEEDNLVMGFGLDKVSLYEKVEVMIGV-EHKELSPYCILLCLTLDGKLLMFYVA 1335
            RIGLQ++ +DN +MG  +D+VS+   V V  G  E KEL PY +L+CLTL+GKL+MF VA
Sbjct: 359  RIGLQENGDDNTIMGLCIDRVSVAGTVNVRSGSDELKELPPYFVLVCLTLEGKLVMFNVA 418

Query: 1336 GVEEIP-DSPKTASTLSDGEDDSLPVLPVACDTSKTSSRFEEDREKGTVLYVKSPQKSQE 1512
             V   P  S    ++ SD ED   P+  +  D SK SS   E+ ++  V    S Q  Q+
Sbjct: 419  SVAGPPASSDADLASSSDIEDAYTPL--IEDDLSKQSSEEPEEHQQLNV----SVQNEQK 472

Query: 1513 ELQTKGGGNILKESELQVTELNDFSKTSSHVDLSNKETGTNFSKLFGLAAENKGMLQPLS 1692
             L  +        +E      N FSK    V  S  E             +NK   +P +
Sbjct: 473  HLNAE-----KFSTEQSFPNENIFSKEFESVKSSVSE-------------DNKKKQEPYA 514

Query: 1693 SKQESITFCDLAYTGPQSLISGRPXXXXXXXXXXXXXXXIDVFKDSSKLETQKTVFASPN 1872
             K   +        G QS+I   P                D  K S              
Sbjct: 515  EKPLQVE------DGQQSMI---PRQFGTSFGQSPVSLGYDTNKFSGFGPALSVSDKLQK 565

Query: 1873 VVGTNSLSENIPSTVQSSYKDSL-GSDVFSNDFSRNLQRDXXXXXXXXXXXXHKLSPSDA 2049
             V   S S ++ + V+S    +L GS    N    ++ +               +SP D 
Sbjct: 566  DVSAQSKSMHLQANVESKSTPALFGSPGLQN----SIFQSPLNTSSQPWSSGKGVSPPDF 621

Query: 2050 FKSRTASSEVNRVQHTGSRMGNTGQVTGSQSSSEI--------RYGNISNIKDPNAVLKF 2205
                  S  V   QH  S    TG V    S+ E         R   +SN+  P      
Sbjct: 622  VPGPFPS--VKDTQHKQSVQSGTGYVNPPMSTKETPVQVVETGRASALSNLSSP------ 673

Query: 2206 PVHTSGKSTHTEGQKYPVGAAKLELELGISSSQVSPYGDSASNILPKFKLQPSQENLKNS 2385
                 G++  T       G  K+E    I +SQ+S        +   F+   S +  K  
Sbjct: 674  ----LGQNWDTN-----EGVEKIEPIPSIRASQLS------QQVKSSFEKSASHQQHKTP 718

Query: 2386 QSSRGTALERGLSKNFGNVNEMAKELDTLLADIEGDGGFRDACMLFQKDSVLGVEQDLEN 2565
             S+    LE  +SK   N+NEMA+E+DTLL  IEG GGF+D+C +  K  V  +EQ LE+
Sbjct: 719  LSAGPLRLEHNMSKQPSNINEMAREMDTLLQSIEGPGGFKDSCEVLLKSHVEELEQGLES 778

Query: 2566 LADRGRVWKNKVEEQLEGVQHLLDQTIQVLARRIYMEGIVKQASDTQYWDLWNRQKLTPE 2745
            LA R + WK+ + EQ   +QHLLD+TIQVLA++ YMEG+ KQ +D QYW LWNRQKL PE
Sbjct: 779  LAGRCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPE 838

Query: 2746 LELKRRQILKVNQDLTNQLVELERHFNTLELNRFSDSGGDSIGRRVLRGGSNPSRRTQAF 2925
            LE KR+ I+K+N+DLT+QL+ELER+FN LEL+R+ + GG  + RR +   S PSRR Q+ 
Sbjct: 839  LEAKRQHIMKLNKDLTHQLIELERYFNRLELDRYHEDGGHPVARRGVPSRSAPSRRVQSL 898

Query: 2926 SRLYNTMSSQLAAAEQLSECLTKQMSVLNIESPSAKRKLIAKELFDSIGLAYDGDSFKSP 3105
              L+NTMSSQLAA+EQLSECL+KQM+ L I+SP   +K + +ELF++IG+ YD  SF SP
Sbjct: 899  HSLHNTMSSQLAASEQLSECLSKQMTYLKIDSP--VKKNVKQELFETIGIPYDA-SFSSP 955

Query: 3106 DVKKVVHSPESLNKVPFSSASSAIKEQSWRNPSSVVKSFEPETA-RRRVSLDRSWASFEP 3282
            D  K  ++  + N +  SS  ++I  QS +  SS +K+ +PETA RRR SLDR+WA+FEP
Sbjct: 956  DAVKAKNASSAKNLL-LSSIPASINAQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEP 1014

Query: 3283 PKTTVKRMLLQEEHS----------------KPTANKSPLMINKEGLKQSPSLHSYVNSN 3414
            PKTTVKRMLLQE+                    T  +S L +       SP + S     
Sbjct: 1015 PKTTVKRMLLQEQQKTGMNQQIVLSERLRSVNNTQERSLLRLKNHA---SPVVSSNKGIM 1071

Query: 3415 QSSRFQLQAEQDNLSKA----SKQNSP----------TSFKWSNNLSGTSQSL------- 3531
            +S +      Q  L K      + NSP           SF WS N S ++ S        
Sbjct: 1072 ESFQQDTSEAQSTLFKTRPPMPQSNSPFTISPISASKPSFNWSGNKSSSTTSYAEESAPS 1131

Query: 3532 KSSVMQVTQRSNXXXXXXXXXXXXXXXEVQINKPGTF---------------GLVSDRST 3666
            ++   +   +                 E    K G F               G V   ST
Sbjct: 1132 QNKDTRTVSQPGGSNFLLKRPVASTVFEQTEKKAGEFKFSEAKANAFVETAAGSVQHLST 1191

Query: 3667 IGMGRANQSEYS-----QVQPISFSNATSKLPLESSSNQTSSTTIHVPSQILASPNES-S 3828
               G  +  E+S     Q+ P+S     S  P +S     +S++I+       +   S S
Sbjct: 1192 TSSG--SDYEFSKGFGAQLSPMSSGGPASSFPSKSLFGFKTSSSIYGDKVTFPAATVSVS 1249

Query: 3829 VSKLSNVNHGDTAQAKAKSSSMNCPEVSQEDSVTVPVKS--LNSQFSLFSSPAVSS 3990
             S LS+     T+     SS             ++P+ S  +   FS+ S+  VS+
Sbjct: 1250 SSPLSSTPLDSTSTLSTPSSPPMSSSTQDSVPASIPISSAPVMQTFSVASTSTVSA 1305



 Score =  116 bits (290), Expect = 7e-23
 Identities = 87/244 (35%), Positives = 114/244 (46%), Gaps = 23/244 (9%)
 Frame = +1

Query: 4222 QATNQQVHPSTNVKLEVQPTE-----LKPVIPPMEPKPTISGLST------------KFD 4350
            Q+T   V  +T  + E +P +     L+  + P+     +SG S+             F 
Sbjct: 1446 QSTVDSVANATKTQNEPRPVKSEISNLETTVTPVSSSGFLSGFSSGTESSLASMAAPSFS 1505

Query: 4351 VDTTSQPEPQSGKFNFSPETAVAPAPADVSTTIVATDRKNGSPDLTATQEDEMEEEASDP 4530
               +SQP+ QS        +   P PA + T+      K  + D   TQEDEM+EEA + 
Sbjct: 1506 WPGSSQPQQQS--------STPVPFPASLPTSASPFGEKKDTVD---TQEDEMDEEAPEA 1554

Query: 4531 T--ANXXXXXXXXXXXXAAPTSAAPKSNPFGLTFPNTAANPASSPFNLTVPSGELFRPAS 4704
            +                + P  AAPKSNPFG  F N      S+PFN+TVPSGELF+PAS
Sbjct: 1555 SQATELSMGSFGGFGLGSTPNPAAPKSNPFGGPFGNATTTTTSNPFNMTVPSGELFKPAS 1614

Query: 4705 FSLQ--QPSQPANMSAFSSHFTVPE--PTKSFFXXXXXXXXXXXXXXSVLGAFGQSRQLG 4872
            F+ Q  QPSQPA   AFS     P   P +S F              SVLG+FGQSRQ+G
Sbjct: 1615 FNFQNPQPSQPAGFGAFS---VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIG 1671

Query: 4873 TSLP 4884
              LP
Sbjct: 1672 AGLP 1675


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