BLASTX nr result

ID: Coptis24_contig00009601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009601
         (1622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285596.2| PREDICTED: uncharacterized protein LOC100265...   430   e-118
ref|XP_002264303.2| PREDICTED: uncharacterized protein LOC100257...   427   e-117
emb|CBI35448.3| unnamed protein product [Vitis vinifera]              419   e-114
ref|XP_002518318.1| catalytic, putative [Ricinus communis] gi|22...   417   e-114
emb|CAN70041.1| hypothetical protein VITISV_033511 [Vitis vinifera]   417   e-114

>ref|XP_002285596.2| PREDICTED: uncharacterized protein LOC100265997 [Vitis vinifera]
            gi|302142108|emb|CBI19311.3| unnamed protein product
            [Vitis vinifera]
          Length = 335

 Score =  430 bits (1105), Expect = e-118
 Identities = 211/312 (67%), Positives = 237/312 (75%)
 Frame = +3

Query: 90   SIMTSSFLFPSLVQLTPNFNSSLRFQASPFPTLRCFSSLSEMDGIADPSLFPLHRCKTLH 269
            S++ +    P+    +P+  S L  Q  P  ++   SS+S+MD  A   L+PLHRCKT+H
Sbjct: 10   SLIPTPIFKPATTAASPSSYSPLLPQIRPSSSVLRCSSISDMDATAGQGLYPLHRCKTIH 69

Query: 270  LIRHAQGIHNVEAEKDFKAYLSPALFDAHLTPLGWQQVDNLRKHVRACGLSNRIDLVVTS 449
            L+RHAQGIHNVE EKD  AYLS  LFDAHLTPLGWQQVDNL KHV+ACGLS +++LVV S
Sbjct: 70   LVRHAQGIHNVEGEKDHSAYLSQELFDAHLTPLGWQQVDNLHKHVQACGLSKKVELVVVS 129

Query: 450  PLLRTMQTAXXXXXXXXXXXXMDATPLMVANAGKSDRSAYSSLNSPPFVAVELCREHLGV 629
            PLLRTMQTA            +D TPLMVAN G S+R A SSLN PPF+A+ELCREHLGV
Sbjct: 130  PLLRTMQTAAGVFGGESYKDGIDVTPLMVANVGNSERPAISSLNRPPFLALELCREHLGV 189

Query: 630  RPCDKRRSIDEYLPLFPAIDFSLIESDEDTWWKADIREPNEDVADRGMKFLKWLWTRKEK 809
             PCDKRRSI EY PLFPAIDFSLIESD+D  W AD+RE NEDVA RGMKF+ WL TRKEK
Sbjct: 190  HPCDKRRSIHEYRPLFPAIDFSLIESDDDVLWTADVREKNEDVASRGMKFMNWLCTRKEK 249

Query: 810  EIAVVTHSGFLFHTFKELGNRYHPLMKEEICKHFTNCELRSMVIVDTNMIGSDSSTTNYP 989
            EIAVV+HSGFLFH     GN  HPL+K EICKHF NCELRSMVIVD  MIGSDSSTTNYP
Sbjct: 250  EIAVVSHSGFLFHALSAFGNDCHPLVKSEICKHFANCELRSMVIVDRGMIGSDSSTTNYP 309

Query: 990  GKIPQGPDLPSD 1025
            GKIP G DLPSD
Sbjct: 310  GKIPHGLDLPSD 321


>ref|XP_002264303.2| PREDICTED: uncharacterized protein LOC100257829 [Vitis vinifera]
          Length = 332

 Score =  427 bits (1097), Expect = e-117
 Identities = 208/280 (74%), Positives = 231/280 (82%), Gaps = 2/280 (0%)
 Frame = +3

Query: 192  CFSSLS--EMDGIADPSLFPLHRCKTLHLIRHAQGIHNVEAEKDFKAYLSPALFDAHLTP 365
            C SSLS  +MD  A PSLFPLHRCKTLHL+RHAQGIHNV+ +K++KAYLSPA FDA LT 
Sbjct: 37   CRSSLSVADMDSGAGPSLFPLHRCKTLHLVRHAQGIHNVDGDKNYKAYLSPAFFDAQLTH 96

Query: 366  LGWQQVDNLRKHVRACGLSNRIDLVVTSPLLRTMQTAXXXXXXXXXXXXMDATPLMVANA 545
            LGWQQVDNLRKHV ACGL+ RI+LV+TSPLLRTMQTA            MD  PLMVANA
Sbjct: 97   LGWQQVDNLRKHVHACGLAKRIELVITSPLLRTMQTAVGVFGGEGYKDRMDVLPLMVANA 156

Query: 546  GKSDRSAYSSLNSPPFVAVELCREHLGVRPCDKRRSIDEYLPLFPAIDFSLIESDEDTWW 725
            G+ +RSA SSL+SPPF+AVELCREHLGV PCDKRRSI +Y  LFPAIDFSLIESDED  W
Sbjct: 157  GECNRSAISSLDSPPFLAVELCREHLGVHPCDKRRSISDYQFLFPAIDFSLIESDEDILW 216

Query: 726  KADIREPNEDVADRGMKFLKWLWTRKEKEIAVVTHSGFLFHTFKELGNRYHPLMKEEICK 905
            KA++RE NE+VA RG+KF+ WLWTRKEKEIA+VTHSGFLFHT    GN  HPL+K EICK
Sbjct: 217  KANVRETNEEVAARGLKFMNWLWTRKEKEIAIVTHSGFLFHTLNAFGNDCHPLVKTEICK 276

Query: 906  HFTNCELRSMVIVDTNMIGSDSSTTNYPGKIPQGPDLPSD 1025
            HF NCELRSM+IVD +M GSDSSTTNYPGKIP G DLPSD
Sbjct: 277  HFANCELRSMIIVDRSMAGSDSSTTNYPGKIPPGLDLPSD 316


>emb|CBI35448.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  419 bits (1077), Expect = e-114
 Identities = 201/271 (74%), Positives = 224/271 (82%)
 Frame = +3

Query: 213  MDGIADPSLFPLHRCKTLHLIRHAQGIHNVEAEKDFKAYLSPALFDAHLTPLGWQQVDNL 392
            MD  A PSLFPLHRCKTLHL+RHAQGIHNV+ +K++KAYLSPA FDA LT LGWQQVDNL
Sbjct: 1    MDSGAGPSLFPLHRCKTLHLVRHAQGIHNVDGDKNYKAYLSPAFFDAQLTHLGWQQVDNL 60

Query: 393  RKHVRACGLSNRIDLVVTSPLLRTMQTAXXXXXXXXXXXXMDATPLMVANAGKSDRSAYS 572
            RKHV ACGL+ RI+LV+TSPLLRTMQTA            MD  PLMVANAG+ +RSA S
Sbjct: 61   RKHVHACGLAKRIELVITSPLLRTMQTAVGVFGGEGYKDRMDVLPLMVANAGECNRSAIS 120

Query: 573  SLNSPPFVAVELCREHLGVRPCDKRRSIDEYLPLFPAIDFSLIESDEDTWWKADIREPNE 752
            SL+SPPF+AVELCREHLGV PCDKRRSI +Y  LFPAIDFSL +SDED  WKA++RE NE
Sbjct: 121  SLDSPPFLAVELCREHLGVHPCDKRRSISDYQFLFPAIDFSLAKSDEDILWKANVRETNE 180

Query: 753  DVADRGMKFLKWLWTRKEKEIAVVTHSGFLFHTFKELGNRYHPLMKEEICKHFTNCELRS 932
            +VA RG+KF+ WLWTRKEKEIA+VTHSGFLFHT    GN  HPL+K EICKHF NCELRS
Sbjct: 181  EVAARGLKFMNWLWTRKEKEIAIVTHSGFLFHTLNAFGNDCHPLVKTEICKHFANCELRS 240

Query: 933  MVIVDTNMIGSDSSTTNYPGKIPQGPDLPSD 1025
            M+IVD +M GSDSSTTNYPGKIP G DLPSD
Sbjct: 241  MIIVDRSMAGSDSSTTNYPGKIPPGLDLPSD 271


>ref|XP_002518318.1| catalytic, putative [Ricinus communis] gi|223542538|gb|EEF44078.1|
            catalytic, putative [Ricinus communis]
          Length = 338

 Score =  417 bits (1073), Expect = e-114
 Identities = 205/320 (64%), Positives = 240/320 (75%)
 Frame = +3

Query: 66   NKVQSQSLSIMTSSFLFPSLVQLTPNFNSSLRFQASPFPTLRCFSSLSEMDGIADPSLFP 245
            + + S S S  +S+ LFP +              +S FP       +++MDG   PSLFP
Sbjct: 24   HSISSSSSSSSSSTALFPLVCS-----------SSSSFP-------VADMDGAPGPSLFP 65

Query: 246  LHRCKTLHLIRHAQGIHNVEAEKDFKAYLSPALFDAHLTPLGWQQVDNLRKHVRACGLSN 425
            LHRCKT+HL+RHAQG+HNVE +K++KAYLSP  +DA LT LGWQQVDNLRKHV+ CGLS 
Sbjct: 66   LHRCKTIHLVRHAQGMHNVEGDKNYKAYLSPKYYDAQLTQLGWQQVDNLRKHVQTCGLSK 125

Query: 426  RIDLVVTSPLLRTMQTAXXXXXXXXXXXXMDATPLMVANAGKSDRSAYSSLNSPPFVAVE 605
            RIDLVVTSPLLRT+QTA            +D  PLMVANAG S R+A SS NSPPF+AVE
Sbjct: 126  RIDLVVTSPLLRTLQTAVGVFGGEGYTNKVDTLPLMVANAGDSARAAISSFNSPPFIAVE 185

Query: 606  LCREHLGVRPCDKRRSIDEYLPLFPAIDFSLIESDEDTWWKADIREPNEDVADRGMKFLK 785
            LCREH GV PCDKRR+I EY  LFPAIDFSLIE+DED  WKAD+RE  +++ DRG+KF+ 
Sbjct: 186  LCREHFGVHPCDKRRNISEYQFLFPAIDFSLIETDEDVLWKADVRETTKELTDRGLKFMN 245

Query: 786  WLWTRKEKEIAVVTHSGFLFHTFKELGNRYHPLMKEEICKHFTNCELRSMVIVDTNMIGS 965
            WLWTRKEKEIA+VTHSGFLFHT    GN  HPL+K+EIC  FTNCELRSMVIVD +MIG+
Sbjct: 246  WLWTRKEKEIAIVTHSGFLFHTLSAFGNDCHPLVKKEICNRFTNCELRSMVIVDRSMIGT 305

Query: 966  DSSTTNYPGKIPQGPDLPSD 1025
            D STTNYPGKIP+G DLPSD
Sbjct: 306  DPSTTNYPGKIPRGLDLPSD 325


>emb|CAN70041.1| hypothetical protein VITISV_033511 [Vitis vinifera]
          Length = 285

 Score =  417 bits (1073), Expect = e-114
 Identities = 201/271 (74%), Positives = 217/271 (80%)
 Frame = +3

Query: 213  MDGIADPSLFPLHRCKTLHLIRHAQGIHNVEAEKDFKAYLSPALFDAHLTPLGWQQVDNL 392
            MD  A   L+PLHRCKT+HL+RHAQGIHNVE EKD  AYLS  LFDAHLTPLGWQQVDNL
Sbjct: 1    MDATAGQGLYPLHRCKTIHLVRHAQGIHNVEGEKDHSAYLSQELFDAHLTPLGWQQVDNL 60

Query: 393  RKHVRACGLSNRIDLVVTSPLLRTMQTAXXXXXXXXXXXXMDATPLMVANAGKSDRSAYS 572
             KHV+ACGLS +++LVV SPLLRTMQTA            +D TPLMVAN G S+R A S
Sbjct: 61   HKHVQACGLSKKVELVVVSPLLRTMQTAAGVFGGESYKDGIDVTPLMVANVGNSERPAIS 120

Query: 573  SLNSPPFVAVELCREHLGVRPCDKRRSIDEYLPLFPAIDFSLIESDEDTWWKADIREPNE 752
            SLN PPF+A+ELCREHLGV PCDKRRSI EY PLFPAIDFSLIESD+D  W AD+RE NE
Sbjct: 121  SLNRPPFLALELCREHLGVHPCDKRRSIHEYRPLFPAIDFSLIESDDDVLWTADVREKNE 180

Query: 753  DVADRGMKFLKWLWTRKEKEIAVVTHSGFLFHTFKELGNRYHPLMKEEICKHFTNCELRS 932
            DVA RGMKF+ WL TRKEKEIAVV+HSGFLFH     GN  HPL+K EICKHF NCELRS
Sbjct: 181  DVASRGMKFMNWLCTRKEKEIAVVSHSGFLFHALSAFGNDCHPLVKSEICKHFANCELRS 240

Query: 933  MVIVDTNMIGSDSSTTNYPGKIPQGPDLPSD 1025
            MVIVD  MIGSDSSTTNYPGKIP G DLPSD
Sbjct: 241  MVIVDRGMIGSDSSTTNYPGKIPHGLDLPSD 271


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