BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009599
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   481   e-133
emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]   473   e-131
ref|XP_003521310.1| PREDICTED: pre-mRNA-processing factor 39-lik...   463   e-128
ref|XP_003553509.1| PREDICTED: pre-mRNA-processing factor 39-lik...   454   e-125
ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncat...   437   e-120

>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  481 bits (1238), Expect = e-133
 Identities = 243/349 (69%), Positives = 276/349 (79%), Gaps = 3/349 (0%)
 Frame = -2

Query: 1038 SQENAAVDSTQAGGYYSSMNGNGVDDVRHIASVGHDVNGTASHDASAAAVELQYD--AVP 865
            S   AA + +QA GY SS+NGN + + R+  SV    NG AS D   AAVE Q++  +VP
Sbjct: 98   SSNLAAAELSQAAGYDSSVNGNAITEARNFPSVD---NGNAS-DVGGAAVEPQFEEGSVP 153

Query: 864  AVSTEEERLWSIVKANSLDFNSWTSLIEETERVAEDNILKIRKIYDAFLAEFPLCYGYWK 685
            A+S EE+RLWSIV+ANSLDFN+WT+LIEETE++AEDNILKIR++YDAFLAEFPLCYGYWK
Sbjct: 154  AMSAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNILKIRRVYDAFLAEFPLCYGYWK 213

Query: 684  KYAEHEHRLTSVDKVVEVFERAVEGVTYSVDMWLHYCVFAISTYGDQDTVRRLFERGLAF 505
            KYA+HE RL S++KVVEV+ERAV+GVTYSVD+WLHYC+FAISTYGD DT+RRLFERGLA+
Sbjct: 214  KYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFAISTYGDPDTIRRLFERGLAY 273

Query: 504  VGTDYLSYPLWDKYIEYEYSHQEWSQLATIYTRILENPNQQLDRYFGSFKELAGSRPLSE 325
            VGTDYLSYPLWDK+IEYEYS QEWS+LA IYTRILENPNQQLDRY  SFKELAGSRPLSE
Sbjct: 274  VGTDYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKELAGSRPLSE 333

Query: 324  LRXXXXXXXXXXXXXXXXSQGTEGEVCHDGAEHSHS-XXXXXXXXXXXEKYVAIREEMYK 148
            L                  QG EGE   D  E S              EKY+AIREEMYK
Sbjct: 334  LTTAEEAAATAGAFSDANGQGIEGEARPDEVEQSSKPVSAGLTDAEELEKYIAIREEMYK 393

Query: 147  KSKEFDSKIIGFETAIRRPYFHVRPLNGSELENWHNYLDFIERVDDFNK 1
            K+K+FDSKIIGFETAIRRPYFHVRPLN +ELENWHNYLDFIER DDFNK
Sbjct: 394  KAKDFDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLDFIERGDDFNK 442



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = -3

Query: 1424 MGDSETVVAETATGKDYASTGYTPADYNTINSNAVTEDGGAFVTGDLN----SVEMTDGG 1257
            MGDSETVVA+T+    Y    Y+  +Y    SNAV  D GAF   D      S   TD  
Sbjct: 1    MGDSETVVAQTSGVVGYT---YSSTEYAGTGSNAVP-DAGAFAAVDTRTLAGSAAPTDAA 56

Query: 1256 VYAVSDGSTLGDGSAYGSDPNVV 1188
             Y+++DGS LG+G+ YG+DPN V
Sbjct: 57   -YSLTDGSNLGEGNTYGTDPNTV 78


>emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]
          Length = 826

 Score =  473 bits (1216), Expect = e-131
 Identities = 243/370 (65%), Positives = 275/370 (74%), Gaps = 24/370 (6%)
 Frame = -2

Query: 1038 SQENAAVDSTQAGGYYSSMNGNGVDDVRHIASVGHDVNGTASHDASAAAVELQYDA---- 871
            S   AA + +QA GY SS+NGN + + R+  SV    NG AS D   AAVE Q++     
Sbjct: 98   SSNLAAAELSQAAGYDSSVNGNAITEARNFPSVD---NGNAS-DVGGAAVESQFEEGSVV 153

Query: 870  -------------------VPAVSTEEERLWSIVKANSLDFNSWTSLIEETERVAEDNIL 748
                               VPA+S EE+RLWSIV+ANSLDFN+WT+LIEETE++AEDNIL
Sbjct: 154  QILNVESLFFVLSLAVPFQVPAMSAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNIL 213

Query: 747  KIRKIYDAFLAEFPLCYGYWKKYAEHEHRLTSVDKVVEVFERAVEGVTYSVDMWLHYCVF 568
            KIR++YDAFLAEFPLCYGYWKKYA+HE RL S++KVVEV+ERAV+GVTYSVD+WLHYC+F
Sbjct: 214  KIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIF 273

Query: 567  AISTYGDQDTVRRLFERGLAFVGTDYLSYPLWDKYIEYEYSHQEWSQLATIYTRILENPN 388
            AISTYGD DT+RRLFERGLA+VGTDYLSYPLWDK+IEYEYS QEWS+LA IYTRILENPN
Sbjct: 274  AISTYGDPDTIRRLFERGLAYVGTDYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPN 333

Query: 387  QQLDRYFGSFKELAGSRPLSELRXXXXXXXXXXXXXXXXSQGTEGEVCHDGAEHSHS-XX 211
            QQLDRY  SFKELAGSRPLSEL                  QG EGE   D  E S     
Sbjct: 334  QQLDRYLNSFKELAGSRPLSELTTAEEAAATAGAFSDANGQGIEGEARPDEVEQSSKPVS 393

Query: 210  XXXXXXXXXEKYVAIREEMYKKSKEFDSKIIGFETAIRRPYFHVRPLNGSELENWHNYLD 31
                     EKY+AIREEMYKK+K+FDSKIIGFETAIRRPYFHVRPLN +ELENWHNYLD
Sbjct: 394  AGLTDAEELEKYIAIREEMYKKAKDFDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLD 453

Query: 30   FIERVDDFNK 1
            FIER DDFNK
Sbjct: 454  FIERGDDFNK 463



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = -3

Query: 1424 MGDSETVVAETATGKDYASTGYTPADYNTINSNAVTEDGGAFVTGDLNSVEMTDG---GV 1254
            MGDSETVVA+T+    Y    Y+  +Y    SNAV  D GAF   D  ++  +       
Sbjct: 1    MGDSETVVAQTSGVVGYT---YSSTEYAGTGSNAVP-DAGAFAAVDTRTLAGSAAPXDAA 56

Query: 1253 YAVSDGSTLGDGSAYGSDPNVV 1188
            Y+++DGS LG+G+ YG+DPN V
Sbjct: 57   YSLTDGSNLGEGNTYGTDPNTV 78


>ref|XP_003521310.1| PREDICTED: pre-mRNA-processing factor 39-like [Glycine max]
          Length = 828

 Score =  463 bits (1192), Expect = e-128
 Identities = 235/345 (68%), Positives = 265/345 (76%), Gaps = 2/345 (0%)
 Frame = -2

Query: 1029 NAAVDSTQAGGYYSSMNGNGVDDVRHIASVGHDVNGTASHDASAAAVELQY-DAVPAVST 853
            + A DST    Y SS+NG     V + + +    NG A  +A  +A E Q  D   A+S 
Sbjct: 101  STAADSTMVSDYNSSVNGGVAGAVTNTSGLE---NGNALENADGSADEKQQADGYAALSA 157

Query: 852  EEERLWSIVKANSLDFNSWTSLIEETERVAEDNILKIRKIYDAFLAEFPLCYGYWKKYAE 673
            EE+RLW+IV+ANSLDF +WTSLIEETE+ AEDNILKIR++YDAFLAEFPLCYGYWKKYA+
Sbjct: 158  EEDRLWNIVRANSLDFTAWTSLIEETEKAAEDNILKIRRVYDAFLAEFPLCYGYWKKYAD 217

Query: 672  HEHRLTSVDKVVEVFERAVEGVTYSVDMWLHYCVFAISTYGDQDTVRRLFERGLAFVGTD 493
            HE RL S+DKVVEV+ERAV+GVTYSVDMWLHYC+FAI+TYGD DTVRRLFERGLA+VGTD
Sbjct: 218  HEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRRLFERGLAYVGTD 277

Query: 492  YLSYPLWDKYIEYEYSHQEWSQLATIYTRILENPNQQLDRYFGSFKELAGSRPLSELRXX 313
            YLS+PLWDKYIEYEY  Q+W++LA IYTRILENPNQQLDRYF SFKELAG+RPLSELR  
Sbjct: 278  YLSFPLWDKYIEYEYMQQDWARLAVIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTA 337

Query: 312  XXXXXXXXXXXXXXSQGTEGEVCHDGAEHS-HSXXXXXXXXXXXEKYVAIREEMYKKSKE 136
                           Q TEGEV  DGAE S  S           EKY+AIREEMYKK+KE
Sbjct: 338  DEAAAVAGVASEATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKE 397

Query: 135  FDSKIIGFETAIRRPYFHVRPLNGSELENWHNYLDFIERVDDFNK 1
            FDSKIIGFETAIRRPYFHVRPLN  ELENWHNYLDFIER  D +K
Sbjct: 398  FDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSK 442


>ref|XP_003553509.1| PREDICTED: pre-mRNA-processing factor 39-like [Glycine max]
          Length = 828

 Score =  454 bits (1169), Expect = e-125
 Identities = 236/343 (68%), Positives = 265/343 (77%), Gaps = 2/343 (0%)
 Frame = -2

Query: 1023 AVDSTQAGGYYSSMNGNGVDDVRHIASVGHDVNGTASHDASAAAVELQY-DAVPAVSTEE 847
            A +ST    Y SS+NG  V  V +  +VG + NG A  +A  +A E Q  D   A+S EE
Sbjct: 103  AAESTMVSDYNSSVNGGVVGAVAN--AVGLE-NGNALENADGSADEKQLADGYAALSAEE 159

Query: 846  ERLWSIVKANSLDFNSWTSLIEETERVAEDNILKIRKIYDAFLAEFPLCYGYWKKYAEHE 667
            +RLW+IV+ANSLDF +WTSLIEETE+  EDNILKIR++YDAFLAEFPLCYGYWKKYA+HE
Sbjct: 160  DRLWNIVRANSLDFTAWTSLIEETEKT-EDNILKIRRVYDAFLAEFPLCYGYWKKYADHE 218

Query: 666  HRLTSVDKVVEVFERAVEGVTYSVDMWLHYCVFAISTYGDQDTVRRLFERGLAFVGTDYL 487
             RL S+DKVVEV+ERAV+GVTYSVDMWLHYC+FAISTYGD +TVRRLFERGLA+VGTDYL
Sbjct: 219  ARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPNTVRRLFERGLAYVGTDYL 278

Query: 486  SYPLWDKYIEYEYSHQEWSQLATIYTRILENPNQQLDRYFGSFKELAGSRPLSELRXXXX 307
            S+PLWDKYIEYEY  Q+W+ LA IYTRILENPNQQLDRYF SFKELAG+RPLSELR    
Sbjct: 279  SFPLWDKYIEYEYMQQDWACLAVIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTADE 338

Query: 306  XXXXXXXXXXXXSQGTEGEVCHDGAEHS-HSXXXXXXXXXXXEKYVAIREEMYKKSKEFD 130
                         Q TEGEV  DGAE S  S           EKY+AIREEMYKK+KEFD
Sbjct: 339  AAAVAGVASEATGQATEGEVHPDGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFD 398

Query: 129  SKIIGFETAIRRPYFHVRPLNGSELENWHNYLDFIERVDDFNK 1
            SKIIGFETAIRRPYFHVRPLN  ELENWHNYLDFIER  D +K
Sbjct: 399  SKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSK 441


>ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncatula]
            gi|355500388|gb|AES81591.1| Pre-mRNA-processing factor
            [Medicago truncatula]
          Length = 838

 Score =  437 bits (1123), Expect = e-120
 Identities = 229/361 (63%), Positives = 263/361 (72%), Gaps = 20/361 (5%)
 Frame = -2

Query: 1023 AVDSTQAGGYYSSMNGNGVDDVRHIASVGHDVNGTASHDASAAAVELQY-DAVPAVSTEE 847
            A+DS      +SS+NG+       + +VG + NG AS +   +A E Q  DA  A+S EE
Sbjct: 98   AMDSAMVSADHSSVNGS-------VDTVGLE-NGNASENVDESADEKQLTDAYAALSAEE 149

Query: 846  ERLWSIVKANSLDFNSWTSLIEETERVAEDNILKIRKIYDAFLAEFPLCYGYWKKYAEHE 667
            +RLW+IV ANS DF +WTSLI+ETE+VAE+NILK+R++YDAFLAEFPLCYGYWKKYA+HE
Sbjct: 150  DRLWNIVTANSSDFTAWTSLIDETEKVAENNILKMRRVYDAFLAEFPLCYGYWKKYADHE 209

Query: 666  HRLTSVDKVVEVFERAVEGVTYSVDMWLHYCVFAISTYGDQDTVRR-------------- 529
             RL S DKVVEV+ERAV+GVTYSVDMWLHYC+FAISTYGD DTVRR              
Sbjct: 210  ARLGSADKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRDRATVPSPFYGGKA 269

Query: 528  ----LFERGLAFVGTDYLSYPLWDKYIEYEYSHQEWSQLATIYTRILENPNQQLDRYFGS 361
                LFERGLA+VGTDYLS+PLWDKYIEYEY  Q+W++LA IYTRILENPNQQLDRYF S
Sbjct: 270  LMGLLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNS 329

Query: 360  FKELAGSRPLSELRXXXXXXXXXXXXXXXXSQGTEGEVCHDGAEHS-HSXXXXXXXXXXX 184
            FKELA +RPLSELR                 QG EGEV  DGA++S              
Sbjct: 330  FKELASNRPLSELRTADEAAAVAGVVSEGIDQGVEGEVHPDGADNSPKPASAGLTEAEEL 389

Query: 183  EKYVAIREEMYKKSKEFDSKIIGFETAIRRPYFHVRPLNGSELENWHNYLDFIERVDDFN 4
            EKY+AIREEMYKK+KEFDSKIIGFET IRRPYFHVRPLN  ELENWHNYLDFIER  D +
Sbjct: 390  EKYIAIREEMYKKAKEFDSKIIGFETTIRRPYFHVRPLNIGELENWHNYLDFIEREGDLS 449

Query: 3    K 1
            K
Sbjct: 450  K 450