BLASTX nr result

ID: Coptis24_contig00009596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009596
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   247   2e-63
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   243   3e-62
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   241   1e-61
ref|XP_002531170.1| carbon catabolite repressor protein, putativ...   240   3e-61
ref|XP_003521518.1| PREDICTED: carbon catabolite repressor prote...   239   7e-61

>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  247 bits (631), Expect = 2e-63
 Identities = 112/130 (86%), Positives = 123/130 (94%)
 Frame = -2

Query: 451 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 272
           MLSV+RVHLPSDIPIVGCELTPYVLL+RPDT+ TTDDVPES+P+DG  LRY+WYRIQ+DR
Sbjct: 1   MLSVIRVHLPSDIPIVGCELTPYVLLRRPDTNATTDDVPESAPLDGHFLRYKWYRIQSDR 60

Query: 271 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 92
           KVAICSVHPSEQATLQCLGCVK K+PVAKSYHCSP+CFSDAWQHHR LH+RAA A+NENG
Sbjct: 61  KVAICSVHPSEQATLQCLGCVKAKLPVAKSYHCSPKCFSDAWQHHRVLHDRAASAINENG 120

Query: 91  TEEEELFGRF 62
            EEEELFGRF
Sbjct: 121 NEEEELFGRF 130


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  243 bits (621), Expect = 3e-62
 Identities = 110/130 (84%), Positives = 122/130 (93%)
 Frame = -2

Query: 451 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 272
           MLSVLRVHLPSDIPIVGCELTPYVLL+RPD ++TT+DVPES+P++G  LRY+WYRIQ+DR
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKNLTTEDVPESAPIEGHFLRYKWYRIQSDR 60

Query: 271 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 92
           KVA+CSVHPSE ATLQCLGCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA AVNENG
Sbjct: 61  KVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENG 120

Query: 91  TEEEELFGRF 62
            EEEELFGRF
Sbjct: 121 NEEEELFGRF 130


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  241 bits (616), Expect = 1e-61
 Identities = 109/130 (83%), Positives = 121/130 (93%)
 Frame = -2

Query: 451 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 272
           MLSVLRVHLPSDIPIVGCELTPYVLL+RPD ++TT+DVPE +P++G  LRY+WYRIQ+DR
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKNLTTEDVPEXAPIEGHFLRYKWYRIQSDR 60

Query: 271 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 92
           KVA+CSVHPSE ATLQCLGCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA AVNENG
Sbjct: 61  KVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENG 120

Query: 91  TEEEELFGRF 62
            EEEELFGRF
Sbjct: 121 NEEEELFGRF 130


>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
           gi|223529240|gb|EEF31213.1| carbon catabolite repressor
           protein, putative [Ricinus communis]
          Length = 603

 Score =  240 bits (612), Expect = 3e-61
 Identities = 108/130 (83%), Positives = 122/130 (93%)
 Frame = -2

Query: 451 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 272
           MLSV+RVHLPSDIPIVGCELTPYVLL+RPD ++TTDDVPES+P+DG  LRY+WYRIQ+DR
Sbjct: 1   MLSVIRVHLPSDIPIVGCELTPYVLLRRPDKAVTTDDVPESAPLDGHFLRYKWYRIQSDR 60

Query: 271 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 92
           KVA+CSVHPSEQATLQCLGCVK KIPVAKSYHCS +CFSDAWQHHR LH+RAA AV+ENG
Sbjct: 61  KVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSTKCFSDAWQHHRVLHDRAASAVSENG 120

Query: 91  TEEEELFGRF 62
            +EEE+FGRF
Sbjct: 121 NDEEEVFGRF 130


>ref|XP_003521518.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
           [Glycine max]
          Length = 602

 Score =  239 bits (609), Expect = 7e-61
 Identities = 106/130 (81%), Positives = 120/130 (92%)
 Frame = -2

Query: 451 MLSVLRVHLPSDIPIVGCELTPYVLLQRPDTSITTDDVPESSPVDGFCLRYRWYRIQNDR 272
           MLSVLRVHLPSDIPIVGCELTPYVLL+RPD ++TTDD PE++P+DG  LRY+WYR+Q+D+
Sbjct: 1   MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDFPETAPLDGHFLRYKWYRVQSDK 60

Query: 271 KVAICSVHPSEQATLQCLGCVKGKIPVAKSYHCSPRCFSDAWQHHRTLHERAAIAVNENG 92
           KVA+CSVHPSEQA LQCLGCVK KIPVAKSYHCSP+CFSDAWQHHR LH+RAA A NENG
Sbjct: 61  KVAVCSVHPSEQAALQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAANENG 120

Query: 91  TEEEELFGRF 62
            EEEEL+GRF
Sbjct: 121 NEEEELYGRF 130


Top