BLASTX nr result

ID: Coptis24_contig00009593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009593
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530469.1| amino acid transporter, putative [Ricinus co...   317   2e-84
ref|XP_002327519.1| amino acid transporter [Populus trichocarpa]...   314   1e-83
ref|XP_003597936.1| Sodium-coupled neutral amino acid transporte...   310   2e-82
gb|AAN62337.1|AF506028_4 CTV.3 [Citrus trifoliata]                    308   6e-82
ref|XP_002298208.1| amino acid transporter [Populus trichocarpa]...   308   7e-82

>ref|XP_002530469.1| amino acid transporter, putative [Ricinus communis]
           gi|223530014|gb|EEF31939.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 497

 Score =  317 bits (812), Expect = 2e-84
 Identities = 164/244 (67%), Positives = 182/244 (74%)
 Frame = +1

Query: 1   EDFDGDLLLIGDVKNSNNNGSGIPGAVFNLATSIIGAGIMALPATMKVXXXXXXXXXXXX 180
           +DFD D   +   K  +N GSGI GAVFNL TSIIGAGIMALPATMKV            
Sbjct: 63  DDFDIDNYPLVVSKQPSNKGSGIYGAVFNLTTSIIGAGIMALPATMKVLGLILGVLLIVL 122

Query: 181 XXXXSEISVELLIRFSVLCKASSYGDVVQSALGRPARILSEICIIINNAGVLVVYLIIMG 360
               SE+SVE+L+RFSVLCKASSYG+VVQ ALG+ A++LSEICII+NNAGV+VVYLII+G
Sbjct: 123 MGILSEVSVEMLVRFSVLCKASSYGEVVQCALGKTAKVLSEICIIVNNAGVMVVYLIIIG 182

Query: 361 DVMSGSLHHMGVFDQWLGYGFWDHRRLVILVTVVVFLAPLCFLEKIDXXXXXXXXXXXXX 540
           DVMSGSLHHMGVFDQWLG+G WDHR+LVIL+ VVVFLAPLC L+KID             
Sbjct: 183 DVMSGSLHHMGVFDQWLGHGMWDHRKLVILIVVVVFLAPLCALDKIDSLSLTSAASVALA 242

Query: 541 XXXXXXXXXXXXIKLVEGKVDTPRMGPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYN 720
                       IKLVEGK+  PRM PDFGSK AILDLLVVIPIMTNAYVCHFNVQPIYN
Sbjct: 243 IVFVVVCFIVAFIKLVEGKIQVPRMTPDFGSKNAILDLLVVIPIMTNAYVCHFNVQPIYN 302

Query: 721 ELEG 732
           ELEG
Sbjct: 303 ELEG 306


>ref|XP_002327519.1| amino acid transporter [Populus trichocarpa]
           gi|222836073|gb|EEE74494.1| amino acid transporter
           [Populus trichocarpa]
          Length = 498

 Score =  314 bits (804), Expect = 1e-83
 Identities = 164/245 (66%), Positives = 184/245 (75%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1   EDFD-GDLLLIGDVKNSNNNGSGIPGAVFNLATSIIGAGIMALPATMKVXXXXXXXXXXX 177
           +DFD  D  L+   K S   GSG+ GAVFNL TSIIGAGIMALPATMKV           
Sbjct: 65  DDFDIDDYPLVSKTKTSK--GSGVHGAVFNLTTSIIGAGIMALPATMKVLGLVLGFVLII 122

Query: 178 XXXXXSEISVELLIRFSVLCKASSYGDVVQSALGRPARILSEICIIINNAGVLVVYLIIM 357
                SEISVELL+RFSVLCKASSYGDVV+ ALG+P+++LSEICII+NNAGVLVVYLII+
Sbjct: 123 LMGILSEISVELLVRFSVLCKASSYGDVVRYALGKPSKVLSEICIIVNNAGVLVVYLIII 182

Query: 358 GDVMSGSLHHMGVFDQWLGYGFWDHRRLVILVTVVVFLAPLCFLEKIDXXXXXXXXXXXX 537
           GDVMSGSLHH+GV DQWLG GFWDHR++VILV VVVFLAPLC L+KID            
Sbjct: 183 GDVMSGSLHHVGVLDQWLGNGFWDHRKVVILVVVVVFLAPLCALDKIDSLSLTSAASVAL 242

Query: 538 XXXXXXXXXXXXXIKLVEGKVDTPRMGPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIY 717
                        +KL+EGK++ PRM PDFGSK+AILDLLVVIPIMTNAYVCHFNVQPIY
Sbjct: 243 AVVFVVVCFVVALVKLIEGKIEAPRMTPDFGSKRAILDLLVVIPIMTNAYVCHFNVQPIY 302

Query: 718 NELEG 732
           NELEG
Sbjct: 303 NELEG 307


>ref|XP_003597936.1| Sodium-coupled neutral amino acid transporter [Medicago truncatula]
           gi|355486984|gb|AES68187.1| Sodium-coupled neutral amino
           acid transporter [Medicago truncatula]
          Length = 496

 Score =  310 bits (794), Expect = 2e-82
 Identities = 163/243 (67%), Positives = 182/243 (74%)
 Frame = +1

Query: 4   DFDGDLLLIGDVKNSNNNGSGIPGAVFNLATSIIGAGIMALPATMKVXXXXXXXXXXXXX 183
           D D   L++G + N   +GSG+PGAVFNL T+IIGAGIMALPATMKV             
Sbjct: 59  DIDNYPLVVGPIPN---HGSGVPGAVFNLTTTIIGAGIMALPATMKVLGVVLGIVLIILM 115

Query: 184 XXXSEISVELLIRFSVLCKASSYGDVVQSALGRPARILSEICIIINNAGVLVVYLIIMGD 363
              SEISVELL+RFSV+CKASSYG+VVQ ALGRPARILSEICII+NNAGVLVVYLIIMGD
Sbjct: 116 GVLSEISVELLVRFSVMCKASSYGEVVQHALGRPARILSEICIILNNAGVLVVYLIIMGD 175

Query: 364 VMSGSLHHMGVFDQWLGYGFWDHRRLVILVTVVVFLAPLCFLEKIDXXXXXXXXXXXXXX 543
           VMSGS+HH+GVFDQ +G G WD R+LVILV +VVFLAPLC L+KID              
Sbjct: 176 VMSGSVHHLGVFDQLMGNGVWDQRKLVILVVMVVFLAPLCSLDKIDSLSLTSAASVALAI 235

Query: 544 XXXXXXXXXXXIKLVEGKVDTPRMGPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYNE 723
                      IKLVEGK+D PRM PDF SK++ILDLLVVIPIMTNAYVCHFNVQPIYNE
Sbjct: 236 LFVVVAFTVAFIKLVEGKIDAPRMVPDFSSKQSILDLLVVIPIMTNAYVCHFNVQPIYNE 295

Query: 724 LEG 732
           LEG
Sbjct: 296 LEG 298


>gb|AAN62337.1|AF506028_4 CTV.3 [Citrus trifoliata]
          Length = 462

 Score =  308 bits (790), Expect = 6e-82
 Identities = 156/232 (67%), Positives = 176/232 (75%)
 Frame = +1

Query: 37  VKNSNNNGSGIPGAVFNLATSIIGAGIMALPATMKVXXXXXXXXXXXXXXXXSEISVELL 216
           +   +N GSG+ GAVFNL T++IGAGIMALPA MKV                SE+SVELL
Sbjct: 67  ISAKSNEGSGVAGAVFNLTTTVIGAGIMALPAAMKVLGLAVGFVLIIFMGILSEVSVELL 126

Query: 217 IRFSVLCKASSYGDVVQSALGRPARILSEICIIINNAGVLVVYLIIMGDVMSGSLHHMGV 396
           +RFSVLCKA+SYG+VVQ ALGRPA+ILSEICII+NNAGVLVVYLII+GDVMSGSLHH GV
Sbjct: 127 VRFSVLCKATSYGEVVQYALGRPAKILSEICIILNNAGVLVVYLIIVGDVMSGSLHHTGV 186

Query: 397 FDQWLGYGFWDHRRLVILVTVVVFLAPLCFLEKIDXXXXXXXXXXXXXXXXXXXXXXXXX 576
           FDQWLG G WDHR+L+IL+ +VVFLAPLC L++I+                         
Sbjct: 187 FDQWLGKGMWDHRKLLILIVLVVFLAPLCALDRIESLSMSSAASVALAVVFVVVCFFIAF 246

Query: 577 IKLVEGKVDTPRMGPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEG 732
           IKLVEGK+D PRM PDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEG
Sbjct: 247 IKLVEGKLDPPRMSPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEG 298


>ref|XP_002298208.1| amino acid transporter [Populus trichocarpa]
           gi|222845466|gb|EEE83013.1| amino acid transporter
           [Populus trichocarpa]
          Length = 468

 Score =  308 bits (789), Expect = 7e-82
 Identities = 164/245 (66%), Positives = 184/245 (75%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1   EDFD-GDLLLIGDVKNSNNNGSGIPGAVFNLATSIIGAGIMALPATMKVXXXXXXXXXXX 177
           +DFD  D  L+   K S +  SGI GAVFNL TSIIGAGIMALPATMKV           
Sbjct: 35  DDFDIDDYPLVSKKKTSKD--SGIYGAVFNLTTSIIGAGIMALPATMKVLGLVLGFILII 92

Query: 178 XXXXXSEISVELLIRFSVLCKASSYGDVVQSALGRPARILSEICIIINNAGVLVVYLIIM 357
                SEISVELL+RFSV  KASSYG+VV+ ALG+PA++LSEICII+NNAGVLVVYLII+
Sbjct: 93  VMGILSEISVELLVRFSVRFKASSYGEVVRFALGKPAKVLSEICIIVNNAGVLVVYLIII 152

Query: 358 GDVMSGSLHHMGVFDQWLGYGFWDHRRLVILVTVVVFLAPLCFLEKIDXXXXXXXXXXXX 537
           GDVMSGSLHH+GVFDQWLG GFWDHR+LVILV VVVFLAPLC L+KID            
Sbjct: 153 GDVMSGSLHHVGVFDQWLGNGFWDHRKLVILVVVVVFLAPLCALDKIDSLSLTSAASVAL 212

Query: 538 XXXXXXXXXXXXXIKLVEGKVDTPRMGPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIY 717
                        +KL+EGK+++PRM PDFGSK+AILDLLVVIPIMTNAYVCHFNVQPIY
Sbjct: 213 AVVFVVVCFIVAFVKLIEGKIESPRMTPDFGSKRAILDLLVVIPIMTNAYVCHFNVQPIY 272

Query: 718 NELEG 732
           NELEG
Sbjct: 273 NELEG 277


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