BLASTX nr result

ID: Coptis24_contig00009592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009592
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus c...    75   4e-12
ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    65   4e-09
ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    64   1e-08
ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...    60   1e-07

>ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|222866654|gb|EEF03785.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -3

Query: 278 MASLTNCSKGLSLA-VVILILSPTFLPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCV 102
           MAS T+ S G+ +  +VIL  S TFLP    +  + S  + D  +KQKKM+LGSRPP CV
Sbjct: 1   MASATDSSYGIRITFIVILFFSLTFLPPVSAVSSMPSRGSED--MKQKKMVLGSRPPQCV 58

Query: 101 NKCFHCRPCKATLVIPPHRK 42
           N+C +C+PC A LV PPH K
Sbjct: 59  NRCSNCKPCMAALVTPPHHK 78


>ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus communis]
           gi|223536295|gb|EEF37947.1| hypothetical protein
           RCOM_0224470 [Ricinus communis]
          Length = 108

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = -3

Query: 278 MASLTNCSKGLSLAVVILILSPTFLP---SEQVLGLVSSSNNNDRALKQKKMMLGSRPPL 108
           MASL     GL+   +++++   FLP   S  VL + SS    D   KQ KM+LGSRPP 
Sbjct: 1   MASLAYYPNGLTRIPLVILMFIFFLPFFSSTSVLTVGSSPYLRDNDGKQMKMVLGSRPPQ 60

Query: 107 CVNKCFHCRPCKATLVIPPHRKRS 36
           C+N+C +CRPC A LV PPH K S
Sbjct: 61  CINRCLNCRPCMAALVTPPHHKTS 84


>ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355510400|gb|AES91542.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 92

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
 Frame = -3

Query: 149 LKQKKMMLGSRPPLCVNKCFHCRPCKATLVIPPHRK----RSSEVSFEKDD 9
           + QKK +LGSRPP CVNKC +CRPC ATLVI PH K      ++++ EKD+
Sbjct: 24  INQKKSVLGSRPPRCVNKCLNCRPCMATLVISPHHKVGQIHKAKITAEKDE 74


>ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355505443|gb|AES86585.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 111

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = -3

Query: 251 GLSLAVVILILSPTF---LPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCVNKCFHCR 81
           GL LA +I +L   F   L S+    LV   N++   L+ +KM++GS+PP C+NKC +CR
Sbjct: 12  GLKLATIITVLFIFFFCMLFSKSGGSLVLERNDS---LQDRKMVIGSKPPACLNKCMNCR 68

Query: 80  PCKATLVIPPHRKRSSEVSFEKDDDT 3
           PC ATLV+   RK    +S   D+DT
Sbjct: 69  PCIATLVVSQKRKSYKVLSRGDDNDT 94


>ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus] gi|449528391|ref|XP_004171188.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus]
          Length = 106

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/79 (40%), Positives = 44/79 (55%)
 Frame = -3

Query: 278 MASLTNCSKGLSLAVVILILSPTFLPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCVN 99
           MAS TN    L +AV   ++   FL    + G+    +       QK+ +LGS+PP CV 
Sbjct: 1   MASPTNNLLKLVVAVAFAVVFSLFLSLPTLSGVAEVES------LQKRTVLGSKPPRCVG 54

Query: 98  KCFHCRPCKATLVIPPHRK 42
           KC +CRPC A LV+P HR+
Sbjct: 55  KCLNCRPCTAALVVPEHRE 73


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