BLASTX nr result

ID: Coptis24_contig00009581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009581
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305761.1| predicted protein [Populus trichocarpa] gi|2...   101   9e-20
ref|XP_002272134.1| PREDICTED: uncharacterized protein LOC100243...   100   2e-19
emb|CAN78275.1| hypothetical protein VITISV_037788 [Vitis vinifera]   100   2e-19
ref|XP_003541824.1| PREDICTED: uncharacterized protein LOC100798...    89   5e-16
ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264...    87   3e-15

>ref|XP_002305761.1| predicted protein [Populus trichocarpa] gi|222848725|gb|EEE86272.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/92 (55%), Positives = 63/92 (68%)
 Frame = +2

Query: 341 SSRFINTNSTSELVSDGLSTHVDQTPYLSLNPITTPVTCEPYYGFLPCAPNLWGELFLIV 520
           SSR I  N  S+L+SDGL     Q  +L LN + T VTCEP YGF+PC   +WG LFL+V
Sbjct: 19  SSRSIR-NEFSDLISDGLDQK-GQNNFLQLNNLGTTVTCEPIYGFMPCTTKVWGNLFLLV 76

Query: 521 VYEFLLYLGDTYITSGSELLFRILGPGIFGAS 616
           VYE+LL L D YI+SGS L F++ G G+FG S
Sbjct: 77  VYEYLLSLADKYISSGSNLFFQMFGTGVFGGS 108


>ref|XP_002272134.1| PREDICTED: uncharacterized protein LOC100243523 [Vitis vinifera]
           gi|297740469|emb|CBI30651.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 61/80 (76%)
 Frame = +2

Query: 377 LVSDGLSTHVDQTPYLSLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVYEFLLYLGDTY 556
           LV+DG+  +V Q+P + L    + VTCEP YGFLPC   +WGELFLIVVYEFLL LG+ Y
Sbjct: 29  LVTDGMK-NVTQSPIIGLELSASTVTCEPTYGFLPCTTVVWGELFLIVVYEFLLSLGEQY 87

Query: 557 ITSGSELLFRILGPGIFGAS 616
           +++GS+L F+I G GIFGAS
Sbjct: 88  VSAGSDLFFQIFGTGIFGAS 107


>emb|CAN78275.1| hypothetical protein VITISV_037788 [Vitis vinifera]
          Length = 529

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 61/80 (76%)
 Frame = +2

Query: 377 LVSDGLSTHVDQTPYLSLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVYEFLLYLGDTY 556
           LV+DG+  +V Q+P + L    + VTCEP YGFLPC   +WGELFLIVVYEFLL LG+ Y
Sbjct: 29  LVTDGMK-NVTQSPIIGLELSASTVTCEPTYGFLPCTTVVWGELFLIVVYEFLLSLGEQY 87

Query: 557 ITSGSELLFRILGPGIFGAS 616
           +++GS+L F+I G GIFGAS
Sbjct: 88  VSAGSDLFFQIFGTGIFGAS 107


>ref|XP_003541824.1| PREDICTED: uncharacterized protein LOC100798009 [Glycine max]
          Length = 708

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/88 (51%), Positives = 63/88 (71%), Gaps = 5/88 (5%)
 Frame = +2

Query: 371 SELVSDGLSTHV--DQTPYLSLNPI---TTPVTCEPYYGFLPCAPNLWGELFLIVVYEFL 535
           +ELVSDG+  ++  ++T YL L  I   +    C+  YGFLPC  N++G LFLI+VYE+L
Sbjct: 32  TELVSDGVHNNLQHNETSYLVLKGIDDESFEEPCKQMYGFLPCTNNIFGHLFLILVYEYL 91

Query: 536 LYLGDTYITSGSELLFRILGPGIFGASA 619
           L+ G++Y+  G E +F+ILGPGIFGASA
Sbjct: 92  LFHGESYLAKGGEQIFKILGPGIFGASA 119


>ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264164 [Vitis vinifera]
           gi|302142926|emb|CBI20221.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
 Frame = +2

Query: 356 NTNSTSELVSDGLSTHVDQTPYL---SLNPITTPVTCEPYYGFLPCAPNLWGELFLIVVY 526
           N  S++ LVSDG+  H D +PYL   S + ++   +C+  YGF+PC     G LFLI+VY
Sbjct: 28  NRTSSTGLVSDGVHDHRDGSPYLLLRSFSAVSASDSCDQTYGFMPCTTTTVGNLFLILVY 87

Query: 527 EFLLYLGDTYITSGSELLFRILGPGIFG 610
            +L++L  TY++SGSELL  +LGPG+ G
Sbjct: 88  GYLMFLAATYLSSGSELLLELLGPGLVG 115


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