BLASTX nr result
ID: Coptis24_contig00009569
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009569 (834 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312971.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-09 gb|ABK56715.1| F-box-like protein [Hordeum vulgare] 69 1e-09 emb|CBI39148.3| unnamed protein product [Vitis vinifera] 50 5e-09 ref|XP_002317095.1| predicted protein [Populus trichocarpa] gi|2... 48 3e-07 ref|XP_003567438.1| PREDICTED: F-box protein At5g07610-like [Bra... 61 4e-07 >ref|XP_002312971.1| predicted protein [Populus trichocarpa] gi|222849379|gb|EEE86926.1| predicted protein [Populus trichocarpa] Length = 437 Score = 56.6 bits (135), Expect(2) = 1e-09 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 8/172 (4%) Frame = -1 Query: 825 RRKGVRDNVHVILPQLPFTEDLLVEVLIRV-TTKTLFVCLCVCKSWRSLIYHPAFINRFR 649 +R +NV V + L T+DLL+E+L+R+ T K+ C+ VCK W SLI +FI RF+ Sbjct: 18 KRSKTLNNVSVGMDDL--TDDLLLEILLRLPTAKSAIRCMLVCKRWCSLIPTRSFITRFK 75 Query: 648 M-RSKSLAPLITGILGGQFNPSNPIDLTGVSFYDFGSEIHSNDTPLDTNLSFL------R 490 + + P + T + + G + + + L+ NL L Sbjct: 76 THHTNEKKKKMCDYDAAYQCPLSFFISTEIEDPEDGIILMTPNDELEENLYTLEFLPKKE 135 Query: 489 RSVVVVASHNGFVLCVEKPNQCRFFLEFCPQYILCNPLTKQWFDLPKPQRNR 334 + V V AS N + C+ QYI CNP T++W LP P + R Sbjct: 136 KFVAVKASCNDLLFCLASDEN----YTVTNQYI-CNPFTEKWLLLPPPPKRR 182 Score = 32.7 bits (73), Expect(2) = 1e-09 Identities = 18/73 (24%), Positives = 34/73 (46%) Frame = -3 Query: 277 EIRFKVVSFIFSDTTDLKVDTYYSEIGKWKRSCISHHETFSSRPGILFNDSVYFWGPRYM 98 E RF+V+ F D +D Y SE GKW +S + S + + ++++ + Sbjct: 212 EPRFRVLEFTPISELDAYMDVYCSETGKWNEFILSGRQYDSFLNVVAHDGKLHWYNGSDV 271 Query: 97 FAYNLEEGNLSLF 59 Y+ +G ++F Sbjct: 272 VTYDPFDGGQTIF 284 >gb|ABK56715.1| F-box-like protein [Hordeum vulgare] Length = 178 Score = 68.9 bits (167), Expect = 1e-09 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 2/158 (1%) Frame = -1 Query: 786 PQLPFTEDLLVEVLIRVTTKTLFVCLCVCKSWRSLIYHPAFINRFRMRSKSLAPLITGIL 607 P + +DLLVE+ RV K+ C CV WR LI HP +R ++ +LA Sbjct: 9 PTIKLPDDLLVEIFSRVPYKSACCCKCVSTRWRDLISHPD--HRDKLPRSTLAGFFHRTY 66 Query: 606 GGQFNPSNPIDLTGVSFYDFGSEIHSNDTPLDTNLSFLRRS--VVVVASHNGFVLCVEKP 433 G + NP P VS N PLD +LSFL S + ++ NG +LC Sbjct: 67 GLRSNPPFPHAYRSVS---------GNWCPLDASLSFLPESEELRILDCCNGLLLC---- 113 Query: 432 NQCRFFLEFCPQYILCNPLTKQWFDLPKPQRNRHIKDT 319 R +Y++CNP T++W +P + + + DT Sbjct: 114 --RRLIDPATLEYLVCNPATRKWVTVPATEWSWLVDDT 149 >emb|CBI39148.3| unnamed protein product [Vitis vinifera] Length = 711 Score = 50.4 bits (119), Expect(2) = 5e-09 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 3/144 (2%) Frame = -1 Query: 768 EDLLVEVLIRVTTKTLFVCLCVCKSWRSLIYHPAFINRFRMRSKSLAPLITGILGGQFNP 589 E ++V++L R+ K+L CVCK+W +LI HP F+ +R + P+I G P Sbjct: 6 EVIMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVET-HLRQQHKRPVI-----GLVVP 59 Query: 588 SNPIDLTGVSFYDFGSEIHSNDTPLDTNLSF---LRRSVVVVASHNGFVLCVEKPNQCRF 418 + D +H +D +D L +R+ V+ S NG +LCV + Sbjct: 60 HSVDD-----------PLHKDDLAVDLELHLGIPNKRTTTVLDSCNG-LLCVVDCYYGFY 107 Query: 417 FLEFCPQYILCNPLTKQWFDLPKP 346 L+ + IL NP T+Q +P P Sbjct: 108 SLKPPQKLILWNPSTRQCNHIPCP 131 Score = 36.6 bits (83), Expect(2) = 5e-09 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 10/101 (9%) Frame = -3 Query: 322 YCFFFCYGKEDYDIQEIRFKVVSFIFSDTTDLKVDTYYSEIGKWKRSCISHHETFSSRPG 143 Y FF+ G +DY I ++ +F+ D T +D + + KW+R +H Sbjct: 141 YSFFYDPGSDDYKI----VRIFTFLGKDKTG--IDIFTLKTNKWRRVEETHSSVIGYWSA 194 Query: 142 ILFNDSVYFWGPRY----------MFAYNLEEGNLSLFELP 50 FN ++++ RY M A++L E ELP Sbjct: 195 TYFNGNLHWLAFRYGGYGEDERSSMVAFSLREEKFQEMELP 235 >ref|XP_002317095.1| predicted protein [Populus trichocarpa] gi|222860160|gb|EEE97707.1| predicted protein [Populus trichocarpa] Length = 458 Score = 48.1 bits (113), Expect(2) = 3e-07 Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 14/154 (9%) Frame = -1 Query: 765 DLLVEVLIRVTT-KTLFVCLCVCKSWRSLIYHPAFINRF-------RMRSKSLAPLITGI 610 DLL+ +L+R+ K++F V K W S++ +P F++RF ++R+ + Sbjct: 35 DLLINILVRLPPEKSVFCSKLVSKGWCSILENPYFVSRFISHHINDKLRNHYSSYAAAYH 94 Query: 609 LGGQFNPSNPIDLTGVSFYDFGSEIHSNDTPLDTNLSFLRRS------VVVVASHNGFVL 448 F + + + F+ G++ ++P + L FL + V V AS N + Sbjct: 95 KYPPFFFISRYNDPRLCFFATGAD--QEESPKEFTLEFLPQENDINLIVSVKASCNDLLF 152 Query: 447 CVEKPNQCRFFLEFCPQYILCNPLTKQWFDLPKP 346 C+ K + Y +CNP T+QW LP P Sbjct: 153 CIAKNSDY-----VITHYYICNPFTRQWSVLPPP 181 Score = 32.7 bits (73), Expect(2) = 3e-07 Identities = 22/76 (28%), Positives = 36/76 (47%) Frame = -3 Query: 340 QPSYKRYCFFFCYGKEDYDIQEIRFKVVSFIFSDTTDLKVDTYYSEIGKWKRSCISHHET 161 QP+Y+R+ G++ E RF++V FI + + VD Y SE G+W S + + Sbjct: 197 QPNYQRWI----QGQQ----YESRFRLVRFIEVEEHHVAVDLYCSETGQWNESFLVGAQY 248 Query: 160 FSSRPGILFNDSVYFW 113 +L +D W Sbjct: 249 DFIFTNVLAHDGKLHW 264 >ref|XP_003567438.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon] Length = 389 Score = 60.8 bits (146), Expect = 4e-07 Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%) Frame = -1 Query: 786 PQLPFTEDLLVEVLIRVTTKTLFVCLCVCKSWRSLIYHPAFINRFRMRSKSLAPLITGIL 607 P T+D+LV+++ RV+ K+ C CV + WR+LI HP R+K P + G Sbjct: 9 PLSKLTDDVLVDIISRVSYKSTCCCQCVARRWRNLISHPDH------RTKLHQPTLAGFF 62 Query: 606 GGQFNPSNPIDLTGVSFYDFG---SEIHSNDTP-LDTNLSFLR--RSVVVVASHNGFVLC 445 +N + D ++ Y+ G + + ++ P +LSFL +S+ ++ NG +LC Sbjct: 63 FESYN--STYDYPKMAQYEMGHYYTRVSNDGWPHYHPSLSFLPKCKSLDILDCCNGLLLC 120 Query: 444 -VEKPNQCRFFLEFCPQYILCNPLTKQWFDLP 352 KP + Y++CNP T++W +P Sbjct: 121 RCWKPTYPKTL-----DYVVCNPATEKWMIVP 147