BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009558
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884441.1| predicted protein [Arabidopsis lyrata subsp....    65   4e-09
ref|NP_187084.6| FtsH extracellular protease family [Arabidopsis...    62   6e-08
gb|AAF26780.1|AC016829_4 unknown protein [Arabidopsis thaliana]        62   6e-08

>ref|XP_002884441.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330281|gb|EFH60700.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1294

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   FCCVLGFLPFRGFHKPAFAFSVTS--LFTRNEREIK-KQVVYK--EHEFTGYTKRLLEMV 166
           FC  +GF P   F  PA A    S  ++ + +  +K K+VV K  +HEF+ YT+RLLE V
Sbjct: 120 FCIAIGFSPIHSFQAPALAVPFVSDVIWKKKKETLKEKEVVLKAVDHEFSDYTRRLLETV 179

Query: 167 SVLLKCVEDVRNGKGXXXXXXXXXXXXXXXXXXXQNEIRTVLYXXXXXXXXXXXXXVRKM 346
           SVLLK ++ VR   G                   Q EI T LY             +++ 
Sbjct: 180 SVLLKTIDKVRKENGDVAEVGTALDTVKVEKEKLQKEIMTGLYRDMRRLRKERDVLMKRA 239

Query: 347 EGIVGDVSEGKK 382
           +GIV +    KK
Sbjct: 240 DGIVDEALRLKK 251


>ref|NP_187084.6| FtsH extracellular protease family [Arabidopsis thaliana]
           gi|332640547|gb|AEE74068.1| FtsH extracellular protease
           family [Arabidopsis thaliana]
          Length = 1320

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   FCCVLGFLPFRGFHKPAFAFSVTSLFT---RNEREIKKQVVYK--EHEFTGYTKRLLEMV 166
           FC  +G  P R F  PA A    S      + ER  +K+VV K  +HEF+ YT+RLLE V
Sbjct: 119 FCIAIGLSPIRSFQAPALAVPFVSDVIWKKKKERVREKEVVLKAVDHEFSDYTRRLLETV 178

Query: 167 SVLLKCVEDVRNGKGXXXXXXXXXXXXXXXXXXXQNEIRTVLYXXXXXXXXXXXXXVRKM 346
           SVLLK +E VR   G                   Q EI + LY             +++ 
Sbjct: 179 SVLLKTIEIVRKENGEVAEVGAALDAVKVEKEKLQKEIMSGLYRDMRRLRKERDLLMKRA 238

Query: 347 EGIVGDVSEGKK 382
           + IV +    KK
Sbjct: 239 DKIVDEALSLKK 250


>gb|AAF26780.1|AC016829_4 unknown protein [Arabidopsis thaliana]
          Length = 1293

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
 Frame = +2

Query: 2   FCCVLGFLPFRGFHKPAFAFSVTSLFT---RNEREIKKQVVYK--EHEFTGYTKRLLEMV 166
           FC  +G  P R F  PA A    S      + ER  +K+VV K  +HEF+ YT+RLLE V
Sbjct: 119 FCIAIGLSPIRSFQAPALAVPFVSDVIWKKKKERVREKEVVLKAVDHEFSDYTRRLLETV 178

Query: 167 SVLLKCVEDVRNGKGXXXXXXXXXXXXXXXXXXXQNEIRTVLYXXXXXXXXXXXXXVRKM 346
           SVLLK +E VR   G                   Q EI + LY             +++ 
Sbjct: 179 SVLLKTIEIVRKENGEVAEVGAALDAVKVEKEKLQKEIMSGLYRDMRRLRKERDLLMKRA 238

Query: 347 EGIVGDVSEGKK 382
           + IV +    KK
Sbjct: 239 DKIVDEALSLKK 250