BLASTX nr result

ID: Coptis24_contig00009557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009557
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321306.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|XP_003632391.1| PREDICTED: probable LRR receptor-like serine...   140   1e-31
ref|XP_002270822.2| PREDICTED: probable LRR receptor-like serine...   139   2e-31
emb|CBI37168.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002303117.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002321306.1| predicted protein [Populus trichocarpa] gi|222862079|gb|EEE99621.1|
            predicted protein [Populus trichocarpa]
          Length = 1199

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/150 (53%), Positives = 97/150 (64%)
 Frame = -1

Query: 463  KIADFGVARVEAQNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGVVALEVMMGKLP 284
            +++DFG AR+   + ++ T   G+ GYMAPE+        KCDVYSFGVVALEVMMGK P
Sbjct: 1049 RLSDFGTARLLNTDTSNWTAVAGSYGYMAPELAQTMRLTDKCDVYSFGVVALEVMMGKHP 1108

Query: 283  GEXXXXXXXXXXXXXXXXXXXXXXXXXLPPTGQLAEEIVFVVTTALACTRTNPESRPTMR 104
            GE                           PTGQ AEE+VFVVT ALACTR NPE+RPTMR
Sbjct: 1109 GELLSSIKPSLSNDPELFLKDVLDPRLEAPTGQAAEEVVFVVTVALACTRNNPEARPTMR 1168

Query: 103  LASQELSARTHAYLSEPLGTITMSKLSQLQ 14
              +QELSART AYL+EPL +IT+SKL++LQ
Sbjct: 1169 FVAQELSARTQAYLAEPLDSITISKLTRLQ 1198


>ref|XP_003632391.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Vitis vinifera]
          Length = 1219

 Score =  140 bits (352), Expect = 1e-31
 Identities = 78/151 (51%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
 Frame = -1

Query: 463  KIADFGVARVEAQNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGVVALEVMMGKLP 284
            +++DFG AR+   N ++ T   G+ GY+APE+      N KCDVYSFGVVALEVM+G+ P
Sbjct: 1068 RLSDFGTARLLDPNSSNWTTVAGSYGYIAPELALPMRVNDKCDVYSFGVVALEVMLGRHP 1127

Query: 283  GEXXXXXXXXXXXXXXXXXXXXXXXXXLP-PTGQLAEEIVFVVTTALACTRTNPESRPTM 107
            GE                         LP PTG+LAEE+VFVVT ALACTR NP+SRPTM
Sbjct: 1128 GEFLLSLPSPAISDDPGLFLKDMLDQRLPAPTGRLAEEVVFVVTIALACTRANPKSRPTM 1187

Query: 106  RLASQELSARTHAYLSEPLGTITMSKLSQLQ 14
            R  +QELSA+T A LSEP  +ITM KL+  Q
Sbjct: 1188 RFVAQELSAQTQACLSEPFHSITMGKLTSFQ 1218


>ref|XP_002270822.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Vitis vinifera]
          Length = 1219

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/151 (51%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
 Frame = -1

Query: 463  KIADFGVARVEAQNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGVVALEVMMGKLP 284
            +++DFG AR+   N ++ T   G+ GY+APE+        KCDVYSFGVVALEVM+G+ P
Sbjct: 1068 RLSDFGTARLLDPNSSNWTAVAGSYGYIAPELALTMRVTDKCDVYSFGVVALEVMLGRHP 1127

Query: 283  GEXXXXXXXXXXXXXXXXXXXXXXXXXLP-PTGQLAEEIVFVVTTALACTRTNPESRPTM 107
            GE                         LP PTG+LAEE+VFVVT ALACTR NPESRPTM
Sbjct: 1128 GELLLSLHSPAISDDSGLFLKDMLDQRLPAPTGRLAEEVVFVVTIALACTRANPESRPTM 1187

Query: 106  RLASQELSARTHAYLSEPLGTITMSKLSQLQ 14
            R  +QELSA+T A LSEP  T TM KL+  Q
Sbjct: 1188 RFVAQELSAQTQACLSEPFHTTTMGKLTSFQ 1218


>emb|CBI37168.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/151 (51%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
 Frame = -1

Query: 463  KIADFGVARVEAQNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGVVALEVMMGKLP 284
            +++DFG AR+   N ++ T   G+ GY+APE+        KCDVYSFGVVALEVM+G+ P
Sbjct: 693  RLSDFGTARLLDPNSSNWTAVAGSYGYIAPELALTMRVTDKCDVYSFGVVALEVMLGRHP 752

Query: 283  GEXXXXXXXXXXXXXXXXXXXXXXXXXLP-PTGQLAEEIVFVVTTALACTRTNPESRPTM 107
            GE                         LP PTG+LAEE+VFVVT ALACTR NPESRPTM
Sbjct: 753  GELLLSLHSPAISDDSGLFLKDMLDQRLPAPTGRLAEEVVFVVTIALACTRANPESRPTM 812

Query: 106  RLASQELSARTHAYLSEPLGTITMSKLSQLQ 14
            R  +QELSA+T A LSEP  T TM KL+  Q
Sbjct: 813  RFVAQELSAQTQACLSEPFHTTTMGKLTSFQ 843


>ref|XP_002303117.1| predicted protein [Populus trichocarpa] gi|222844843|gb|EEE82390.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/153 (49%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
 Frame = -1

Query: 463 KIADFGVARVEAQNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGVVALEVMMGKLP 284
           ++ADFG AR+   + ++ T   G+ GYMAPE+        KCDVYSFGVVALEVMMG+ P
Sbjct: 156 RLADFGTARLLNTDSSNWTAVAGSYGYMAPELAQTMRVTDKCDVYSFGVVALEVMMGRHP 215

Query: 283 GEXXXXXXXXXXXXXXXXXXXXXXXXXL---PPTGQLAEEIVFVVTTALACTRTNPESRP 113
           G+                              PTGQ+AEE+VFVVT ALACT+T PE+RP
Sbjct: 216 GDLLSSLSSMKPPLSSDPELFLKDVLDPRLEAPTGQVAEEVVFVVTVALACTQTKPEARP 275

Query: 112 TMRLASQELSARTHAYLSEPLGTITMSKLSQLQ 14
           TM   +QELSART AYL+EPL +IT+SKL   Q
Sbjct: 276 TMHFVAQELSARTQAYLAEPLNSITISKLRSFQ 308


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