BLASTX nr result
ID: Coptis24_contig00009556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009556
(1998 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta ... 921 0.0
ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-... 907 0.0
ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-... 900 0.0
gb|ADL36834.1| TCP domain class transcription factor [Malus x do... 900 0.0
ref|XP_003539816.1| PREDICTED: T-complex protein 1 subunit beta-... 893 0.0
>ref|XP_002285912.1| PREDICTED: T-complex protein 1 subunit beta [Vitis vinifera]
gi|302141688|emb|CBI18891.3| unnamed protein product
[Vitis vinifera]
Length = 527
Score = 921 bits (2380), Expect = 0.0
Identities = 473/505 (93%), Positives = 496/505 (98%)
Frame = +2
Query: 2 SFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVDI 181
SFIGAMAIADL+KTTLGPKGMDKILQSTGRGRS++VTNDGATILKSLHIDNPAAKVLVDI
Sbjct: 23 SFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDI 82
Query: 182 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVID 361
SKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTIISG+RMA+ECA NALL+KV+D
Sbjct: 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGYRMAAECARNALLQKVMD 142
Query: 362 NRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 541
N++DAEKFK DLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG
Sbjct: 143 NKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 202
Query: 542 SLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQI 721
SL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDSM+RVAQI
Sbjct: 203 SLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSRVAQI 262
Query: 722 EGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 901
EGAEKEKM+EKVQKIIGHGINCF+NRQLIYNFPEELFADAG+LAIEHADFDGIERLALVT
Sbjct: 263 EGAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGVLAIEHADFDGIERLALVT 322
Query: 902 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEAE 1081
GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEAE
Sbjct: 323 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEAE 382
Query: 1082 RSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAIP 1261
RSLHDALCVLSQTV+DSRVLLGGGWPEMVMAKEVDELARKTPGKK+HAIEAFS+AL +IP
Sbjct: 383 RSLHDALCVLSQTVIDSRVLLGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALISIP 442
Query: 1262 TTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLSA 1441
TTIADNAGLDSAELI++LRAEHHKE S AGIDVI+G+VGDM +LGISEAFKVKQAVLLSA
Sbjct: 443 TTIADNAGLDSAELIAQLRAEHHKEESHAGIDVISGSVGDMAELGISEAFKVKQAVLLSA 502
Query: 1442 TEAAEMILRVDEIISCAPRRREDRM 1516
TEAAEMILRVDEII+CAPRRREDRM
Sbjct: 503 TEAAEMILRVDEIITCAPRRREDRM 527
>ref|XP_004141061.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
Length = 527
Score = 907 bits (2343), Expect = 0.0
Identities = 462/505 (91%), Positives = 492/505 (97%)
Frame = +2
Query: 2 SFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVDI 181
SF+GAMAIADL+KTTLGPKGMDKILQSTGRGR ++VTNDGATILKSLHIDNPAAKVLVDI
Sbjct: 23 SFVGAMAIADLVKTTLGPKGMDKILQSTGRGRQVTVTNDGATILKSLHIDNPAAKVLVDI 82
Query: 182 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVID 361
SKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTII+G+RMA+ECA NALL+KV+D
Sbjct: 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMAAECARNALLQKVVD 142
Query: 362 NRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 541
N+ D EKFKSDL+KIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG
Sbjct: 143 NKADLEKFKSDLLKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 202
Query: 542 SLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQI 721
SL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDSM++VA+I
Sbjct: 203 SLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKVAEI 262
Query: 722 EGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 901
EGAEKEKM+EKV+KIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGIERLALVT
Sbjct: 263 EGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 322
Query: 902 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEAE 1081
GGEIASTFDNPESVKLG+CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS HVLDEAE
Sbjct: 323 GGEIASTFDNPESVKLGYCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAE 382
Query: 1082 RSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAIP 1261
RSLHDALCVLSQTV DSRV+LGGGWPEM+M+KEVDELARKTPGKK+HAIEAFS+ALQAIP
Sbjct: 383 RSLHDALCVLSQTVNDSRVVLGGGWPEMIMSKEVDELARKTPGKKSHAIEAFSRALQAIP 442
Query: 1262 TTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLSA 1441
T IADNAGLDSA+LI++LRAEHHKEG AGIDVITG+VGDM +LGISEAFKVKQA+LLSA
Sbjct: 443 TIIADNAGLDSADLIAQLRAEHHKEGCNAGIDVITGSVGDMAELGISEAFKVKQAILLSA 502
Query: 1442 TEAAEMILRVDEIISCAPRRREDRM 1516
TEAAEMILRVDEII+CAPRRREDRM
Sbjct: 503 TEAAEMILRVDEIITCAPRRREDRM 527
>ref|XP_004157926.1| PREDICTED: T-complex protein 1 subunit beta-like [Cucumis sativus]
Length = 534
Score = 900 bits (2327), Expect = 0.0
Identities = 462/512 (90%), Positives = 493/512 (96%), Gaps = 7/512 (1%)
Frame = +2
Query: 2 SFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVDI 181
SF+GAMAIADL+KTTLGPKGMDKILQSTGRGR ++VTNDGATILKSLHIDNPAAKVLVDI
Sbjct: 23 SFVGAMAIADLVKTTLGPKGMDKILQSTGRGRQVTVTNDGATILKSLHIDNPAAKVLVDI 82
Query: 182 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVID 361
SKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTII+G+RMA+ECA NALL+KV+D
Sbjct: 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMAAECARNALLQKVVD 142
Query: 362 NRDD-------AEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQ 520
N+ D +EKFKSDL+KIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQ
Sbjct: 143 NKADLVVCWPFSEKFKSDLLKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQ 202
Query: 521 IIKKPGGSLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDS 700
IIKKPGGSL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDS
Sbjct: 203 IIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDS 262
Query: 701 MARVAQIEGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGI 880
M++VA+IEGAEKEKM+EKV+KIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGI
Sbjct: 263 MSKVAEIEGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGI 322
Query: 881 ERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASF 1060
ERLALVTGGEIASTFDNPESVKLG+CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGAS
Sbjct: 323 ERLALVTGGEIASTFDNPESVKLGYCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASH 382
Query: 1061 HVLDEAERSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFS 1240
HVLDEAERSLHDALCVLSQTV DSRV+LGGGWPEM+M+KEVDELARKTPGKK+HAIEAFS
Sbjct: 383 HVLDEAERSLHDALCVLSQTVNDSRVVLGGGWPEMIMSKEVDELARKTPGKKSHAIEAFS 442
Query: 1241 KALQAIPTTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVK 1420
+ALQAIPT IADNAGLDSA+LI++LRAEHHKEG AGIDVITG+VGDM +LGISEAFKVK
Sbjct: 443 RALQAIPTIIADNAGLDSADLIAQLRAEHHKEGCNAGIDVITGSVGDMAELGISEAFKVK 502
Query: 1421 QAVLLSATEAAEMILRVDEIISCAPRRREDRM 1516
QA+LLSATEAAEMILRVDEII+CAPRRREDRM
Sbjct: 503 QAILLSATEAAEMILRVDEIITCAPRRREDRM 534
>gb|ADL36834.1| TCP domain class transcription factor [Malus x domestica]
Length = 527
Score = 900 bits (2327), Expect = 0.0
Identities = 460/505 (91%), Positives = 490/505 (97%)
Frame = +2
Query: 2 SFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVDI 181
SF+GA+AIADL+KTTLGPKGMDKILQSTGRG +++VTNDGATILKSLHIDN AAKVLVDI
Sbjct: 23 SFVGAIAIADLVKTTLGPKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNAAAKVLVDI 82
Query: 182 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVID 361
SKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTIISG+RMA+ECA +ALLRKV+D
Sbjct: 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIISGYRMAAECARDALLRKVVD 142
Query: 362 NRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 541
N+ D+EKFKSDLMKIAMTTLSSKILSQDKEHFA+LAVDAVMRLKGSTNLE+IQIIKKPGG
Sbjct: 143 NKADSEKFKSDLMKIAMTTLSSKILSQDKEHFAQLAVDAVMRLKGSTNLEAIQIIKKPGG 202
Query: 542 SLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQI 721
SL DSFLDEGFILDKKIG+GQPKRIENANILVANTAMDTDKVKIYGARVRVDSMA+VA+I
Sbjct: 203 SLIDSFLDEGFILDKKIGLGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMAKVAEI 262
Query: 722 EGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 901
EGAEK+KM+EKVQKIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGIERLALVT
Sbjct: 263 EGAEKDKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 322
Query: 902 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEAE 1081
GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE+GQACTIVLRGAS HVLDEAE
Sbjct: 323 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVELGQACTIVLRGASHHVLDEAE 382
Query: 1082 RSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAIP 1261
RSLHDALCVLSQTV DSRVLLGGGWPEM+MAKEVDELARKTPGKK+HAIEAFS+AL AIP
Sbjct: 383 RSLHDALCVLSQTVNDSRVLLGGGWPEMIMAKEVDELARKTPGKKSHAIEAFSRALSAIP 442
Query: 1262 TTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLSA 1441
T IADNAGLDSAELI+KLRAEH KEG T+GIDVI+G VGDM + GISEAFKVKQAVLLSA
Sbjct: 443 TIIADNAGLDSAELIAKLRAEHQKEGCTSGIDVISGTVGDMAERGISEAFKVKQAVLLSA 502
Query: 1442 TEAAEMILRVDEIISCAPRRREDRM 1516
TEAAEMILRVDEII+CAPR+REDRM
Sbjct: 503 TEAAEMILRVDEIITCAPRKREDRM 527
>ref|XP_003539816.1| PREDICTED: T-complex protein 1 subunit beta-like [Glycine max]
Length = 527
Score = 893 bits (2307), Expect = 0.0
Identities = 462/505 (91%), Positives = 483/505 (95%)
Frame = +2
Query: 2 SFIGAMAIADLLKTTLGPKGMDKILQSTGRGRSISVTNDGATILKSLHIDNPAAKVLVDI 181
SF+GAMAIADL+KTTLGPKGMDKILQSTGRGR ++VTNDGATILKSLHIDNPAAKVLVDI
Sbjct: 23 SFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDI 82
Query: 182 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAMKIHPMTIISGFRMASECALNALLRKVID 361
SKVQDDEVGDGTTSVVVLAGELLREAEKLVA KIHPMTIISGFRMA+ECA NALL KV+D
Sbjct: 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVATKIHPMTIISGFRMAAECARNALLEKVVD 142
Query: 362 NRDDAEKFKSDLMKIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 541
N+ D+EKF+SDL+ IAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG
Sbjct: 143 NKADSEKFRSDLLNIAMTTLSSKILSQDKEHFAKLAVDAVMRLKGSTNLESIQIIKKPGG 202
Query: 542 SLTDSFLDEGFILDKKIGIGQPKRIENANILVANTAMDTDKVKIYGARVRVDSMARVAQI 721
SL DSFLDEGFILDKKIGIGQPKRIENA ILVANTAMDTDKVKIYGARVRVDSMARVAQI
Sbjct: 203 SLMDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMARVAQI 262
Query: 722 EGAEKEKMKEKVQKIIGHGINCFINRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 901
E AEKEKM+EKVQKIIGHGINCF+NRQLIYNFPEELFADAGILAIEHADFDGIERLALVT
Sbjct: 263 ETAEKEKMREKVQKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 322
Query: 902 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASFHVLDEAE 1081
GGEIASTFDNPESVKLGHC LIEEIMIGEDKLIHFSGV MGQACTIVLRGAS HVLDEAE
Sbjct: 323 GGEIASTFDNPESVKLGHCDLIEEIMIGEDKLIHFSGVAMGQACTIVLRGASHHVLDEAE 382
Query: 1082 RSLHDALCVLSQTVVDSRVLLGGGWPEMVMAKEVDELARKTPGKKAHAIEAFSKALQAIP 1261
RSLHDALCVLSQTV DSRVLLGGGWPEMVMAKEVD LA+KTPGKK+ AIEAFS+AL AIP
Sbjct: 383 RSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKEVDALAKKTPGKKSLAIEAFSRALLAIP 442
Query: 1262 TTIADNAGLDSAELISKLRAEHHKEGSTAGIDVITGAVGDMEKLGISEAFKVKQAVLLSA 1441
T IADNAGLDSAELIS+LRAEH KEG TAGIDVI+G+VGDM + GI EAFKVKQAVLLS+
Sbjct: 443 TIIADNAGLDSAELISQLRAEHQKEGCTAGIDVISGSVGDMAERGICEAFKVKQAVLLSS 502
Query: 1442 TEAAEMILRVDEIISCAPRRREDRM 1516
TEAAEMILRVDEII+CAPRRREDRM
Sbjct: 503 TEAAEMILRVDEIITCAPRRREDRM 527