BLASTX nr result
ID: Coptis24_contig00009552
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009552 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Bra... 107 8e-22 ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co... 106 2e-21 ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly... 106 2e-21 ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly... 106 2e-21 tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea m... 105 3e-21 >ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon] Length = 992 Score = 107 bits (268), Expect = 8e-22 Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 2/79 (2%) Frame = -3 Query: 233 LSEECSNKWKPANVSRKP--YQKPYQFLNIWTVREYLALELEISSPPFKIDFERIIDDFV 60 L+ EC + NV P ++K YQFLNIW +REYL +LEI PPFKI+FERI+DDFV Sbjct: 274 LAAECRGPAQADNVVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERIVDDFV 333 Query: 59 FICFFTGNDFLPHMPSLEI 3 FICFF GNDFLPHMP+LEI Sbjct: 334 FICFFVGNDFLPHMPTLEI 352 >ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis] gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis] Length = 1113 Score = 106 bits (265), Expect = 2e-21 Identities = 45/58 (77%), Positives = 53/58 (91%) Frame = -3 Query: 176 QKPYQFLNIWTVREYLALELEISSPPFKIDFERIIDDFVFICFFTGNDFLPHMPSLEI 3 +KPYQFLNIWT+REYL LE+ I +PPFKIDFE I+DDF+F+CFF GNDFLPHMP+LEI Sbjct: 299 KKPYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEI 356 >ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] Length = 957 Score = 106 bits (264), Expect = 2e-21 Identities = 47/74 (63%), Positives = 58/74 (78%) Frame = -3 Query: 224 ECSNKWKPANVSRKPYQKPYQFLNIWTVREYLALELEISSPPFKIDFERIIDDFVFICFF 45 E + W P + ++K YQFLNIW +REYL E+EI +PPF+IDFERI+DDFVF+CFF Sbjct: 283 EKAEDWNPVD-DTPIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFF 341 Query: 44 TGNDFLPHMPSLEI 3 GNDFLPHMP+LEI Sbjct: 342 VGNDFLPHMPTLEI 355 >ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max] Length = 960 Score = 106 bits (264), Expect = 2e-21 Identities = 47/74 (63%), Positives = 58/74 (78%) Frame = -3 Query: 224 ECSNKWKPANVSRKPYQKPYQFLNIWTVREYLALELEISSPPFKIDFERIIDDFVFICFF 45 E + W P + ++K YQFLNIW +REYL E+EI +PPF+IDFERI+DDFVF+CFF Sbjct: 285 EKAEDWNPVD-DTPIHKKKYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFF 343 Query: 44 TGNDFLPHMPSLEI 3 GNDFLPHMP+LEI Sbjct: 344 VGNDFLPHMPTLEI 357 >tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays] Length = 1066 Score = 105 bits (263), Expect = 3e-21 Identities = 44/58 (75%), Positives = 52/58 (89%) Frame = -3 Query: 176 QKPYQFLNIWTVREYLALELEISSPPFKIDFERIIDDFVFICFFTGNDFLPHMPSLEI 3 +KPYQFLNIWT+REYL E + +PPFKIDFERI+DDF+F+CFF GNDFLPHMP+LEI Sbjct: 298 KKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEI 355