BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009551
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046590.1| Os02g0290400 [Oryza sativa Japonica Group] g...   263   4e-68
ref|XP_002454545.1| hypothetical protein SORBIDRAFT_04g033060 [S...   263   4e-68
ref|XP_002531546.1| Nucleolar essential protein, putative [Ricin...   263   4e-68
ref|XP_002451973.1| hypothetical protein SORBIDRAFT_04g011280 [S...   262   1e-67
ref|NP_001148942.1| ribosome biogenesis protein NEP1 [Zea mays] ...   262   1e-67

>ref|NP_001046590.1| Os02g0290400 [Oryza sativa Japonica Group]
           gi|47847950|dbj|BAD21740.1| putative nucleolar essential
           protein [Oryza sativa Japonica Group]
           gi|47847958|dbj|BAD21747.1| putative nucleolar essential
           protein [Oryza sativa Japonica Group]
           gi|113536121|dbj|BAF08504.1| Os02g0290400 [Oryza sativa
           Japonica Group] gi|215678829|dbj|BAG95266.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218190517|gb|EEC72944.1| hypothetical protein
           OsI_06808 [Oryza sativa Indica Group]
           gi|222622635|gb|EEE56767.1| hypothetical protein
           OsJ_06314 [Oryza sativa Japonica Group]
          Length = 284

 Score =  263 bits (672), Expect = 4e-68
 Identities = 128/214 (59%), Positives = 166/214 (77%)
 Frame = +3

Query: 36  PVHNSKKTRVTFILEKASLQKGVVGKTAKILNSDEHASFLLKQNKSLDDFRPDILYRALL 215
           PV   ++    F+LE+A L+ G VGKT +ILNSD+HA++L KQN++  D+RPDI+++ALL
Sbjct: 70  PVDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPDIIHQALL 129

Query: 216 AIFDSPLCKAGMVQAIYVKVDNGVLFEIKPHVRIPRTIKRFCGLMLELLQKSHITASDNG 395
           AIFDSPL KAG +QA+YV+ + GVLFEIKP+VR+PRT KRFCGLM +LLQK  ITA    
Sbjct: 130 AIFDSPLTKAGRLQAVYVRTEKGVLFEIKPYVRMPRTFKRFCGLMSQLLQKLSITAVGKR 189

Query: 396 EKLLRVIEQPVTRHLPGNSRIIGLSYSSEKLVNLYEYAPDVSDDVNLVFVVGAMTRGTID 575
           EKLL VI+ PVTR+LP  ++ IGLSYS+EK VNL++Y    SDDV LVFVVGAM  G ID
Sbjct: 190 EKLLNVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLVFVVGAMAHGKID 249

Query: 576 KLYTDEFISVSNYPLSASRCVGQICDVLEEKWSI 677
             Y+D++I + NYPLSA+ C+ +IC  LE+KW+I
Sbjct: 250 NEYSDDYIQICNYPLSAACCLNRICSALEQKWNI 283


>ref|XP_002454545.1| hypothetical protein SORBIDRAFT_04g033060 [Sorghum bicolor]
           gi|241934376|gb|EES07521.1| hypothetical protein
           SORBIDRAFT_04g033060 [Sorghum bicolor]
          Length = 280

 Score =  263 bits (672), Expect = 4e-68
 Identities = 128/213 (60%), Positives = 165/213 (77%)
 Frame = +3

Query: 39  VHNSKKTRVTFILEKASLQKGVVGKTAKILNSDEHASFLLKQNKSLDDFRPDILYRALLA 218
           V   ++    F+LE+A L+ G VGKT +ILNSD+HA++L KQN++  D+RPDI+++ALLA
Sbjct: 67  VDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPDIIHQALLA 126

Query: 219 IFDSPLCKAGMVQAIYVKVDNGVLFEIKPHVRIPRTIKRFCGLMLELLQKSHITASDNGE 398
           IFDSPL KAG +QA+YV+ + GVLFEIKPHVR+PRT KRFCGLM +LLQK  ITA    E
Sbjct: 127 IFDSPLTKAGRLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQKLSITAVGKRE 186

Query: 399 KLLRVIEQPVTRHLPGNSRIIGLSYSSEKLVNLYEYAPDVSDDVNLVFVVGAMTRGTIDK 578
           KLL V++ PVTR+LP  +R IGLS+S+EK VNL++Y    SDD  LVFVVGAM  G IDK
Sbjct: 187 KLLNVVKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSSDDEPLVFVVGAMAHGKIDK 246

Query: 579 LYTDEFISVSNYPLSASRCVGQICDVLEEKWSI 677
            YTD++I + NYPLSA+ C+ +IC  LE+KW+I
Sbjct: 247 EYTDDYIQICNYPLSAACCLNRICSALEQKWNI 279


>ref|XP_002531546.1| Nucleolar essential protein, putative [Ricinus communis]
           gi|223528837|gb|EEF30840.1| Nucleolar essential protein,
           putative [Ricinus communis]
          Length = 294

 Score =  263 bits (672), Expect = 4e-68
 Identities = 132/225 (58%), Positives = 169/225 (75%)
 Frame = +3

Query: 3   VVQSQGAHVLSPVHNSKKTRVTFILEKASLQKGVVGKTAKILNSDEHASFLLKQNKSLDD 182
           V + +G  ++     +KK  V F+LEKASL+   VGKT +ILNSD+HA+FL K NK+  D
Sbjct: 69  VQEMEGIPIMPSDSKTKKPGVIFVLEKASLEVAKVGKTYQILNSDDHANFLRKNNKNPAD 128

Query: 183 FRPDILYRALLAIFDSPLCKAGMVQAIYVKVDNGVLFEIKPHVRIPRTIKRFCGLMLELL 362
           +RPDI+Y+ALL+I DSPL KAG +QA+YVK + GVLFE+KP+VRIPRT KRF G+ML+LL
Sbjct: 129 YRPDIVYQALLSILDSPLNKAGRLQAVYVKTEKGVLFEVKPYVRIPRTYKRFTGIMLQLL 188

Query: 363 QKSHITASDNGEKLLRVIEQPVTRHLPGNSRIIGLSYSSEKLVNLYEYAPDVSDDVNLVF 542
           QK  ITA+   EKLLRVI+ PVT++LP NSR IG SYSS+KLV +  Y   V DDV LVF
Sbjct: 189 QKLSITAAGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSDKLVKMSNYVAAVDDDVGLVF 248

Query: 543 VVGAMTRGTIDKLYTDEFISVSNYPLSASRCVGQICDVLEEKWSI 677
           VVGAM  G ID  Y D+FI++S YPLSA+ C+ +IC+ L +KW +
Sbjct: 249 VVGAMAHGKIDCDYIDDFIAISGYPLSAAWCISRICEALADKWGV 293


>ref|XP_002451973.1| hypothetical protein SORBIDRAFT_04g011280 [Sorghum bicolor]
           gi|241931804|gb|EES04949.1| hypothetical protein
           SORBIDRAFT_04g011280 [Sorghum bicolor]
          Length = 285

 Score =  262 bits (669), Expect = 1e-67
 Identities = 127/203 (62%), Positives = 162/203 (79%)
 Frame = +3

Query: 69  FILEKASLQKGVVGKTAKILNSDEHASFLLKQNKSLDDFRPDILYRALLAIFDSPLCKAG 248
           F+LE+A L+ G VGKT +ILNSD+HA++L KQN++  D+RPDI+++ALLAIFDSPL KAG
Sbjct: 82  FVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPDIIHQALLAIFDSPLTKAG 141

Query: 249 MVQAIYVKVDNGVLFEIKPHVRIPRTIKRFCGLMLELLQKSHITASDNGEKLLRVIEQPV 428
            +QA+YV+ + GVLFEIKPHVR+PRT KRFCGLM +LLQK  ITA    EKLL V++ PV
Sbjct: 142 RLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQKLSITAVGKREKLLNVVKNPV 201

Query: 429 TRHLPGNSRIIGLSYSSEKLVNLYEYAPDVSDDVNLVFVVGAMTRGTIDKLYTDEFISVS 608
           TR+LP  +R IGLS+S+EK VNL++Y    SDD  LVFVVGAM  G IDK YTD++I + 
Sbjct: 202 TRYLPVGARKIGLSFSAEKSVNLFDYVAKSSDDEPLVFVVGAMAHGKIDKEYTDDYIQIC 261

Query: 609 NYPLSASRCVGQICDVLEEKWSI 677
           NYPLSA+ C+ +IC  LE+KW+I
Sbjct: 262 NYPLSAACCLNRICSALEQKWNI 284


>ref|NP_001148942.1| ribosome biogenesis protein NEP1 [Zea mays]
           gi|195623488|gb|ACG33574.1| ribosome biogenesis protein
           NEP1 [Zea mays] gi|224033677|gb|ACN35914.1| unknown [Zea
           mays] gi|413938066|gb|AFW72617.1| Ribosome biogenesis
           protein NEP1 [Zea mays]
          Length = 286

 Score =  262 bits (669), Expect = 1e-67
 Identities = 127/213 (59%), Positives = 165/213 (77%)
 Frame = +3

Query: 39  VHNSKKTRVTFILEKASLQKGVVGKTAKILNSDEHASFLLKQNKSLDDFRPDILYRALLA 218
           V   ++    F+LE+A L+ G VGKT +ILNSD+HA++L KQN++  D+RPDI+++ALLA
Sbjct: 73  VDGKRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPDIIHQALLA 132

Query: 219 IFDSPLCKAGMVQAIYVKVDNGVLFEIKPHVRIPRTIKRFCGLMLELLQKSHITASDNGE 398
           IFDSPL KAG +QA+YV+ + GVLFEIKPHVR+PRT KRFCGLM +LLQK  ITA    E
Sbjct: 133 IFDSPLTKAGRLQAVYVRTEKGVLFEIKPHVRMPRTFKRFCGLMSQLLQKLSITAVGKRE 192

Query: 399 KLLRVIEQPVTRHLPGNSRIIGLSYSSEKLVNLYEYAPDVSDDVNLVFVVGAMTRGTIDK 578
           KLL V++ PVTR+LP  +R IGLS+S+EK VNL++Y    +DD  LVFVVGAM  G IDK
Sbjct: 193 KLLNVVKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSNDDEPLVFVVGAMAHGKIDK 252

Query: 579 LYTDEFISVSNYPLSASRCVGQICDVLEEKWSI 677
            YTD++I + NYPLSA+ C+ +IC  LE+KW+I
Sbjct: 253 EYTDDYIQICNYPLSAACCLNRICSALEQKWNI 285