BLASTX nr result

ID: Coptis24_contig00009549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009549
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511668.1| vesicle-associated membrane protein, putativ...    73   2e-11
ref|XP_002302522.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002280265.1| PREDICTED: vesicle-associated protein 1-3 [V...    70   2e-10
ref|XP_004140485.1| PREDICTED: vesicle-associated protein 1-3-li...    64   1e-08
ref|XP_002872966.1| hypothetical protein ARALYDRAFT_327754 [Arab...    61   8e-08

>ref|XP_002511668.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223548848|gb|EEF50337.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 238

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 47/67 (70%)
 Frame = +1

Query: 1   ASVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMR 180
           +SVL NG+Q+SSL +AV              W+TISKLTEEK SA+LQ+Q  RQELELMR
Sbjct: 146 SSVLENGDQDSSLLEAVSRSLEEPKEKSSKVWSTISKLTEEKASALLQNQLLRQELELMR 205

Query: 181 KEISKRR 201
           K++SK R
Sbjct: 206 KQVSKNR 212


>ref|XP_002302522.1| predicted protein [Populus trichocarpa] gi|222844248|gb|EEE81795.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/65 (55%), Positives = 44/65 (67%)
 Frame = +1

Query: 4   SVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMRK 183
           SVL NGNQ+SSL DAV              W+ IS+LTEEK SA+ Q+QK + ELELMRK
Sbjct: 148 SVLENGNQDSSLLDAVSRTLEEPKEKSFETWSLISRLTEEKTSALQQNQKLQHELELMRK 207

Query: 184 EISKR 198
           +ISK+
Sbjct: 208 QISKK 212


>ref|XP_002280265.1| PREDICTED: vesicle-associated protein 1-3 [Vitis vinifera]
           gi|296089177|emb|CBI38880.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   ASVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMR 180
           ASV  NGNQN+SLF  V             AW+ ++KLTEE+ SA+ Q+QK RQELEL+R
Sbjct: 146 ASVHENGNQNTSLFCTVKGSPEEAKEEALEAWSMVTKLTEERASALQQNQKLRQELELVR 205

Query: 181 KEISKRR 201
           KEISK R
Sbjct: 206 KEISKSR 212


>ref|XP_004140485.1| PREDICTED: vesicle-associated protein 1-3-like [Cucumis sativus]
           gi|449521832|ref|XP_004167933.1| PREDICTED:
           vesicle-associated protein 1-3-like [Cucumis sativus]
          Length = 238

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = +1

Query: 10  LNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMRKEI 189
           +++G+QN +LFDAV             AW+ +SKLTEEK++A+L++ K RQELEL+RKE 
Sbjct: 149 VDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAALLKNHKLRQELELLRKEA 208

Query: 190 SKRR 201
           S R+
Sbjct: 209 SGRQ 212


>ref|XP_002872966.1| hypothetical protein ARALYDRAFT_327754 [Arabidopsis lyrata subsp.
           lyrata] gi|297318803|gb|EFH49225.1| hypothetical protein
           ARALYDRAFT_327754 [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/67 (50%), Positives = 42/67 (62%)
 Frame = +1

Query: 1   ASVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMR 180
           AS+   G+Q +SLFD V             AW+ ISKLTEEK SA  QSQK R ELE++R
Sbjct: 158 ASLNEIGSQTASLFDDVSRTFEETNEKSSEAWSMISKLTEEKTSATQQSQKLRLELEMLR 217

Query: 181 KEISKRR 201
           KE SK++
Sbjct: 218 KESSKKQ 224


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