BLASTX nr result
ID: Coptis24_contig00009549
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009549 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511668.1| vesicle-associated membrane protein, putativ... 73 2e-11 ref|XP_002302522.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_002280265.1| PREDICTED: vesicle-associated protein 1-3 [V... 70 2e-10 ref|XP_004140485.1| PREDICTED: vesicle-associated protein 1-3-li... 64 1e-08 ref|XP_002872966.1| hypothetical protein ARALYDRAFT_327754 [Arab... 61 8e-08 >ref|XP_002511668.1| vesicle-associated membrane protein, putative [Ricinus communis] gi|223548848|gb|EEF50337.1| vesicle-associated membrane protein, putative [Ricinus communis] Length = 238 Score = 73.2 bits (178), Expect = 2e-11 Identities = 38/67 (56%), Positives = 47/67 (70%) Frame = +1 Query: 1 ASVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMR 180 +SVL NG+Q+SSL +AV W+TISKLTEEK SA+LQ+Q RQELELMR Sbjct: 146 SSVLENGDQDSSLLEAVSRSLEEPKEKSSKVWSTISKLTEEKASALLQNQLLRQELELMR 205 Query: 181 KEISKRR 201 K++SK R Sbjct: 206 KQVSKNR 212 >ref|XP_002302522.1| predicted protein [Populus trichocarpa] gi|222844248|gb|EEE81795.1| predicted protein [Populus trichocarpa] Length = 237 Score = 69.7 bits (169), Expect = 2e-10 Identities = 36/65 (55%), Positives = 44/65 (67%) Frame = +1 Query: 4 SVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMRK 183 SVL NGNQ+SSL DAV W+ IS+LTEEK SA+ Q+QK + ELELMRK Sbjct: 148 SVLENGNQDSSLLDAVSRTLEEPKEKSFETWSLISRLTEEKTSALQQNQKLQHELELMRK 207 Query: 184 EISKR 198 +ISK+ Sbjct: 208 QISKK 212 >ref|XP_002280265.1| PREDICTED: vesicle-associated protein 1-3 [Vitis vinifera] gi|296089177|emb|CBI38880.3| unnamed protein product [Vitis vinifera] Length = 239 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/67 (55%), Positives = 45/67 (67%) Frame = +1 Query: 1 ASVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMR 180 ASV NGNQN+SLF V AW+ ++KLTEE+ SA+ Q+QK RQELEL+R Sbjct: 146 ASVHENGNQNTSLFCTVKGSPEEAKEEALEAWSMVTKLTEERASALQQNQKLRQELELVR 205 Query: 181 KEISKRR 201 KEISK R Sbjct: 206 KEISKSR 212 >ref|XP_004140485.1| PREDICTED: vesicle-associated protein 1-3-like [Cucumis sativus] gi|449521832|ref|XP_004167933.1| PREDICTED: vesicle-associated protein 1-3-like [Cucumis sativus] Length = 238 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/64 (48%), Positives = 45/64 (70%) Frame = +1 Query: 10 LNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMRKEI 189 +++G+QN +LFDAV AW+ +SKLTEEK++A+L++ K RQELEL+RKE Sbjct: 149 VDDGSQNFALFDAVSRSLEEPKEKSSQAWSNVSKLTEEKDAALLKNHKLRQELELLRKEA 208 Query: 190 SKRR 201 S R+ Sbjct: 209 SGRQ 212 >ref|XP_002872966.1| hypothetical protein ARALYDRAFT_327754 [Arabidopsis lyrata subsp. lyrata] gi|297318803|gb|EFH49225.1| hypothetical protein ARALYDRAFT_327754 [Arabidopsis lyrata subsp. lyrata] Length = 380 Score = 61.2 bits (147), Expect = 8e-08 Identities = 34/67 (50%), Positives = 42/67 (62%) Frame = +1 Query: 1 ASVLNNGNQNSSLFDAVXXXXXXXXXXXXXAWATISKLTEEKNSAMLQSQKFRQELELMR 180 AS+ G+Q +SLFD V AW+ ISKLTEEK SA QSQK R ELE++R Sbjct: 158 ASLNEIGSQTASLFDDVSRTFEETNEKSSEAWSMISKLTEEKTSATQQSQKLRLELEMLR 217 Query: 181 KEISKRR 201 KE SK++ Sbjct: 218 KESSKKQ 224