BLASTX nr result

ID: Coptis24_contig00009545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009545
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278737.2| PREDICTED: uncharacterized protein LOC100263...   369   e-100
emb|CAN74239.1| hypothetical protein VITISV_043329 [Vitis vinifera]   368   1e-99
ref|XP_002512450.1| conserved hypothetical protein [Ricinus comm...   344   2e-92
ref|XP_002319506.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
ref|XP_003556524.1| PREDICTED: uncharacterized protein LOC100792...   319   6e-85

>ref|XP_002278737.2| PREDICTED: uncharacterized protein LOC100263144 [Vitis vinifera]
           gi|296089730|emb|CBI39549.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  369 bits (948), Expect = e-100
 Identities = 178/274 (64%), Positives = 213/274 (77%), Gaps = 1/274 (0%)
 Frame = +2

Query: 2   SGKTNGVCVSPGGRFPPFSSEGKPPRKVNKGPKDLTLCRLFRKKTCCDVTQTHQVLLSIR 181
           SGK +GVC+SPGGRFPPFSSEGKPP+KV+KGPKDLTLCR+FR+KTCCDV+QTH  LLSIR
Sbjct: 21  SGKPDGVCISPGGRFPPFSSEGKPPKKVSKGPKDLTLCRVFRRKTCCDVSQTHPALLSIR 80

Query: 182 RLASVGEANXXXXXXXXXXXXSICDXXXXXXXXXXXXCSSFCDKIFSSCSNAYFSMDAKT 361
           RLAS GEA+            SICD            C+S CDK+F +CSNAYFSMDAK 
Sbjct: 81  RLASTGEASQECLQLWELLECSICDPHVGVQPGPPVICTSLCDKVFQACSNAYFSMDAKR 140

Query: 362 QVLSPCGVSDFVCGRASEWVSNGTELCSHAGFSVKSSEFSHPGMEEPSCYGGKASLDSIA 541
           QVL+PCGV DFVCGRASEW+SNGT+LC   GFSVK S+    GMEE SCYGGKASLDSIA
Sbjct: 141 QVLAPCGVGDFVCGRASEWISNGTDLCHAVGFSVKPSD---AGMEETSCYGGKASLDSIA 197

Query: 542 DSWKSSQSRVTQE-TNLGLFEDFEQWVKEMPFSETVLWAVGGLVLTSGLFFMSKRKSNNR 718
           DSWK+SQS    +  N+G+ +DF+QWV+EM FSE V WAVGG+VLT+GL F+SKRKS+N+
Sbjct: 198 DSWKASQSETPSKIENVGVLDDFQQWVREMAFSERVSWAVGGMVLTAGLLFLSKRKSHNQ 257

Query: 719 RQKQVAVLRTAKRVEVYMNKQSSLTQANRRGVGR 820
           RQK  A+ RTAK++E  +N++  ++Q NRRG GR
Sbjct: 258 RQKLAAIQRTAKKLEAKINQKHPVSQGNRRGGGR 291


>emb|CAN74239.1| hypothetical protein VITISV_043329 [Vitis vinifera]
          Length = 358

 Score =  368 bits (944), Expect = 1e-99
 Identities = 177/273 (64%), Positives = 212/273 (77%), Gaps = 1/273 (0%)
 Frame = +2

Query: 5   GKTNGVCVSPGGRFPPFSSEGKPPRKVNKGPKDLTLCRLFRKKTCCDVTQTHQVLLSIRR 184
           GK +GVC+SPGGRFPPFSSEGKPP+KV+KGPKDLTLCR+FR+KTCCDV+QTH  LLSIRR
Sbjct: 89  GKPDGVCISPGGRFPPFSSEGKPPKKVSKGPKDLTLCRVFRRKTCCDVSQTHPALLSIRR 148

Query: 185 LASVGEANXXXXXXXXXXXXSICDXXXXXXXXXXXXCSSFCDKIFSSCSNAYFSMDAKTQ 364
           LAS GEA+            SICD            C+S CDK+F +CSNAYFSMDAK Q
Sbjct: 149 LASTGEASQECLQLWELLECSICDPHVGVQPGPPVICTSLCDKVFQACSNAYFSMDAKRQ 208

Query: 365 VLSPCGVSDFVCGRASEWVSNGTELCSHAGFSVKSSEFSHPGMEEPSCYGGKASLDSIAD 544
           VL+PCGV DFVCGRASEW+SNGT+LC   GFSVK S+    GMEE SCYGGKASLDSIAD
Sbjct: 209 VLAPCGVGDFVCGRASEWISNGTDLCHAVGFSVKPSD---AGMEETSCYGGKASLDSIAD 265

Query: 545 SWKSSQSRVTQE-TNLGLFEDFEQWVKEMPFSETVLWAVGGLVLTSGLFFMSKRKSNNRR 721
           SWK+SQS    +  N+G+ +DF+QWV+EM FSE V WAVGG+VLT+GL F+SKRKS+N+R
Sbjct: 266 SWKASQSETPSKIKNVGVLDDFQQWVREMAFSERVSWAVGGMVLTAGLLFLSKRKSHNQR 325

Query: 722 QKQVAVLRTAKRVEVYMNKQSSLTQANRRGVGR 820
           QK  A+ RTAK++E  +N++  ++Q NRRG GR
Sbjct: 326 QKLAAIQRTAKKLEAKINQKHPVSQGNRRGGGR 358


>ref|XP_002512450.1| conserved hypothetical protein [Ricinus communis]
           gi|223548411|gb|EEF49902.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score =  344 bits (882), Expect = 2e-92
 Identities = 162/271 (59%), Positives = 209/271 (77%), Gaps = 1/271 (0%)
 Frame = +2

Query: 2   SGKTNGVCVSPGGRFPPFSSEGKPPRKVNKGPKDLTLCRLFRKKTCCDVTQTHQVLLSIR 181
           +GK +GVC S GGRFPPFSSEGKPP+K+++G KDLTLCR+FRKKTCCDV QT+  LLS+R
Sbjct: 29  AGKHDGVCTSKGGRFPPFSSEGKPPKKISRGSKDLTLCRVFRKKTCCDVAQTYPALLSVR 88

Query: 182 RLASVGEANXXXXXXXXXXXXSICDXXXXXXXXXXXXCSSFCDKIFSSCSNAYFSMDAKT 361
           RLAS GEA+            SICD            CSSFCD+++ +C+ AYFSM+AKT
Sbjct: 89  RLASAGEASQECLQLWELLECSICDPNIGIQPGPPLICSSFCDRVYEACATAYFSMEAKT 148

Query: 362 QVLSPCGVSDFVCGRASEWVSNGTELCSHAGFSVKSSEFSHPGMEEPSCYGGKASLDSIA 541
           QVL+PCGV++FVCG+A+EWVSNGTELC  AGF+VK ++ ++ G E   CYGG+ASLDSIA
Sbjct: 149 QVLAPCGVNEFVCGKAAEWVSNGTELCHSAGFAVKVADDTYHGTEGAFCYGGRASLDSIA 208

Query: 542 DSWKSSQSRVTQET-NLGLFEDFEQWVKEMPFSETVLWAVGGLVLTSGLFFMSKRKSNNR 718
           +SWK+S+S + Q+  NLG  EDF+QWV+E+PFSE V WAVGG+VLT+GL F+SKRKS ++
Sbjct: 209 ESWKASRSELPQKAGNLGALEDFQQWVQELPFSEKVSWAVGGMVLTAGLLFLSKRKSYSQ 268

Query: 719 RQKQVAVLRTAKRVEVYMNKQSSLTQANRRG 811
           RQK  A+ RTA+R++  MN+ S  +Q NR+G
Sbjct: 269 RQKLAAIQRTARRLDGKMNQSSPESQGNRKG 299


>ref|XP_002319506.1| predicted protein [Populus trichocarpa] gi|222857882|gb|EEE95429.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  328 bits (840), Expect = 2e-87
 Identities = 162/276 (58%), Positives = 205/276 (74%), Gaps = 4/276 (1%)
 Frame = +2

Query: 5   GKTNGVCVSPGGRFPPFSSEGKPPRKVNKGPKDLTLCRLFRKKTCCDVTQTHQVLLSIRR 184
           GK   VCVS GGRFPP+SSEGKPP+KV KG +DLTLCRLF KKTCCDV QT+   LS+RR
Sbjct: 8   GKNARVCVSKGGRFPPYSSEGKPPKKVGKGARDLTLCRLFHKKTCCDVAQTYPASLSVRR 67

Query: 185 LASVGEANXXXXXXXXXXXXSICDXXXXXXXXXXXXCSSFCDKIFSSCSNAYFSMDAKTQ 364
           LAS GEA+            SICD            C+SFCD+++ +C++AYFSMDA  +
Sbjct: 68  LASTGEASQECLQLWELLECSICDPQIGVQPGPPLICASFCDRVYQACASAYFSMDANKR 127

Query: 365 VLSPCGVSDFVCGRASEWVSNGTELCSHAGFSVKSSEFSHPGMEEPSCYGGKASLDSIAD 544
           V++PCGV+DFVCG+A+EWVSNGTELC  AGF+VK S+ ++ G+EE SCYGG+ASLDSI+D
Sbjct: 128 VIAPCGVNDFVCGQAAEWVSNGTELCHAAGFAVKLSD-ANVGVEEVSCYGGRASLDSISD 186

Query: 545 SWKSSQSRVTQET-NLGLFEDFEQWVKEMPFSETVLWAVGGLVLTSGLFFMSKRKSNNRR 721
           SW+S QS  TQ+  NLG+ EDF+QWV+EM FSE V WAVGGLVLT+GL FMSKRKS+ +R
Sbjct: 187 SWRSPQSEFTQKVENLGVVEDFQQWVQEMQFSEKVSWAVGGLVLTAGLLFMSKRKSHGQR 246

Query: 722 QKQVAVLR---TAKRVEVYMNKQSSLTQANRRGVGR 820
           QK  A+ R    A+R++  M++ S  +  NR+G+ R
Sbjct: 247 QKLAAIQRAAIAARRLDGRMSQNSPDSLVNRKGIRR 282


>ref|XP_003556524.1| PREDICTED: uncharacterized protein LOC100792179 isoform 1 [Glycine
           max]
          Length = 302

 Score =  319 bits (818), Expect = 6e-85
 Identities = 157/271 (57%), Positives = 194/271 (71%), Gaps = 2/271 (0%)
 Frame = +2

Query: 2   SGKTNGVCVSPGGRFPPFSSEGKPPRKVNKGPKDLTLCRLFRKKTCCDVTQTHQVLLSIR 181
           SGK +GVCVS GGRFPPF SEG  P+    GPKDLTLCR+FRKKTCCDVT TH  LLS+R
Sbjct: 32  SGKPSGVCVSQGGRFPPFKSEGGAPKN---GPKDLTLCRIFRKKTCCDVTHTHPALLSVR 88

Query: 182 RLASVGEANXXXXXXXXXXXXSICDXXXXXXXXXXXXCSSFCDKIFSSCSNAYFSMDAKT 361
           +LAS GEA             SICD            C+S C++I+ +CSNAYFSMD KT
Sbjct: 89  KLASTGEATQECLHLWELLECSICDPRVGTQPGPPLICASLCERIYEACSNAYFSMDVKT 148

Query: 362 QVLSPCGVSDFVCGRASEWVSNGTELCSHAGFSVKSSEFSHPGMEEPSCYGGKASLDSIA 541
           Q+L+PCGV+DFVCGRA+EWVSNGT+LC  AGF VK S+      EE SCYG KASL S+ 
Sbjct: 149 QILAPCGVNDFVCGRAAEWVSNGTDLCLAAGFRVKPSDIVDIASEETSCYGDKASLGSVV 208

Query: 542 DSWKSSQSRVTQE-TNLGLFEDFEQWVKEMPFSETVLWAVGGLVLTSGLFFMSKRKSNNR 718
           DSWK+SQ  +T++  +L + +DF+QW +EMPF E V WA+GG+VLT+GL F+SKRKS+N+
Sbjct: 209 DSWKASQFELTEKGESLRMLDDFQQWAREMPFGERVSWAIGGMVLTAGLMFISKRKSHNQ 268

Query: 719 RQKQVAVLRTAKRVEVYMNKQ-SSLTQANRR 808
           RQK  A+ RTA+++E  M +Q  S  Q NRR
Sbjct: 269 RQKLAAIKRTARKLESRMMEQRPSNAQENRR 299


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