BLASTX nr result

ID: Coptis24_contig00009542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009542
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546978.1| PREDICTED: solute carrier family 25 member 4...   298   e-115
ref|XP_002872205.1| hypothetical protein ARALYDRAFT_910694 [Arab...   271   5e-94
ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 4...   348   3e-93
gb|AAM65995.1| mitochondrial carrier-like protein [Arabidopsis t...   270   1e-92
ref|NP_197992.1| Mitochondrial substrate carrier family protein ...   267   2e-92

>ref|XP_003546978.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max]
          Length = 340

 Score =  298 bits (763), Expect(2) = e-115
 Identities = 152/220 (69%), Positives = 176/220 (80%), Gaps = 1/220 (0%)
 Frame = -3

Query: 1024 MSLNAAEED-SAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQ 848
            M+L AAEE+ SA ++ +PA+IDW  LDKSKFF LGAALFSGVSATLYPVVVLKTRQQ+  
Sbjct: 1    MNLGAAEEEESAAQVRVPAEIDWHKLDKSKFFCLGAALFSGVSATLYPVVVLKTRQQVFP 60

Query: 847  TQVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFP 668
            +Q+S +KTA S+++ EG+R LYRGFGTSLMGTIPARALYM ALE+TKS+VG AT++ G  
Sbjct: 61   SQISCIKTAFSLIRLEGLRALYRGFGTSLMGTIPARALYMAALEITKSSVGTATLKFGVA 120

Query: 667  EPTXXXXXXXXXXXXXXXXAQLVWTPVDVVSQRLMVQGGHNFNSSSCKYRGGIDAFQKIL 488
            EPT                AQLVWTPVDVVSQRLMVQG  N + SS +Y  GIDAF+KIL
Sbjct: 121  EPTAATVANGAAGLSAAMVAQLVWTPVDVVSQRLMVQGVSNSSKSSNQYMNGIDAFRKIL 180

Query: 487  KSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGG 368
            K DG +GLYRGFG+SILTYAPSNAVWWASYSV QR+VWGG
Sbjct: 181  KKDGAKGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGG 220



 Score =  145 bits (366), Expect(2) = e-115
 Identities = 75/110 (68%), Positives = 83/110 (75%)
 Frame = -2

Query: 332 QRLVWGGFSCYFRRKDNYCKDESCTSNGNGYSFRPDTKTVVAVQGLSAAMAGGISALITM 153
           QR+VWGG      +K        C   G     RPD+KTV+AVQG+SAAMAGG+SALITM
Sbjct: 214 QRMVWGGVGWCLCKK-------GCGGEGE---LRPDSKTVMAVQGVSAAMAGGMSALITM 263

Query: 152 PLDTIKTRLQVLDGDDNGRRPPTIGQTVRNLVREGGWAACYRGLGPRWAS 3
           PLDTIKTRLQVLDGD+N RR PT+ QTVR LVREGGW ACYRGLGPRWAS
Sbjct: 264 PLDTIKTRLQVLDGDENRRRGPTVMQTVRKLVREGGWMACYRGLGPRWAS 313


>ref|XP_002872205.1| hypothetical protein ARALYDRAFT_910694 [Arabidopsis lyrata subsp.
            lyrata] gi|297318042|gb|EFH48464.1| hypothetical protein
            ARALYDRAFT_910694 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score =  271 bits (694), Expect(2) = 5e-94
 Identities = 134/236 (56%), Positives = 170/236 (72%), Gaps = 6/236 (2%)
 Frame = -3

Query: 1027 KMSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQ 848
            K     +   S+ ++H+  DIDW+MLDKS+FFFLGAALFSGVS  LYP+VVLKTRQQ+S 
Sbjct: 10   KRRATTSSSSSSSQVHMSNDIDWQMLDKSRFFFLGAALFSGVSTALYPIVVLKTRQQVSP 69

Query: 847  TQVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFP 668
            T+VS    +++I + EG+RG Y+GFGTSL+GTIPARALYMTALE+TKS+VG ATV LG  
Sbjct: 70   TRVSCANISLAIARLEGLRGFYKGFGTSLLGTIPARALYMTALEITKSSVGQATVSLGLS 129

Query: 667  EPTXXXXXXXXXXXXXXXXAQLVWTPVDVVSQRLMVQGGHNFNS------SSCKYRGGID 506
            + T                AQ+VWTP+DVVSQRLMVQG  + +       +SC+YR G D
Sbjct: 130  DTTALAVANGAAGLTSAVAAQVVWTPIDVVSQRLMVQGDLSLSKHIPGVMNSCRYRNGFD 189

Query: 505  AFQKILKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDN 338
            AF+KIL +DG RG YRGFG+SILTYAPSNAVWWASYS+ Q+ +W  +   +  K++
Sbjct: 190  AFRKILYTDGPRGFYRGFGISILTYAPSNAVWWASYSLAQKSIWSRYKHSYNHKED 245



 Score =  101 bits (251), Expect(2) = 5e-94
 Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 NGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNG-RRPPTIGQT 72
           + Y+ + D    V VQ LSAA A G SAL+TMP+DTIKTRLQVLD ++NG RR  T+ Q+
Sbjct: 238 HSYNHKEDAGGSVVVQALSAATASGCSALVTMPVDTIKTRLQVLDTEENGRRRAMTVMQS 297

Query: 71  VRNLVREGGWAACYRGLGPRWAS 3
           V++L++EGG+ ACYRGLGPRW S
Sbjct: 298 VKSLMKEGGFRACYRGLGPRWVS 320


>ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis
            vinifera] gi|359482721|ref|XP_003632815.1| PREDICTED:
            solute carrier family 25 member 44-like [Vitis vinifera]
          Length = 358

 Score =  348 bits (892), Expect = 3e-93
 Identities = 180/244 (73%), Positives = 196/244 (80%), Gaps = 15/244 (6%)
 Frame = -3

Query: 1024 MSLNAAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQT 845
            MSL+AAEEDSAQEIHLPADIDW+MLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQI+Q+
Sbjct: 1    MSLSAAEEDSAQEIHLPADIDWEMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQIAQS 60

Query: 844  QVSSVKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPE 665
            QVSS++TA SIV+HEG R LYRGFGTSLMGTIPARALYMTALEVTKSNVG ATV+LGFPE
Sbjct: 61   QVSSIRTAFSIVRHEGFRALYRGFGTSLMGTIPARALYMTALEVTKSNVGTATVRLGFPE 120

Query: 664  PTXXXXXXXXXXXXXXXXAQLVWTPVDVVSQRLMVQGGHNF---------------NSSS 530
            PT                AQLVWTP+DVVSQRLMVQGG                  N+SS
Sbjct: 121  PTAAAIANAAAGLSAAMAAQLVWTPIDVVSQRLMVQGGGGGGGGGGCGPGEKLKIPNASS 180

Query: 529  CKYRGGIDAFQKILKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFR 350
            CKY GGIDAF+KIL +DG RGLYRGFG+SILTYAPSNAVWWASYSV QRL+W G   Y  
Sbjct: 181  CKYLGGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWSGIGVYLC 240

Query: 349  RKDN 338
            +KD+
Sbjct: 241  KKDD 244



 Score =  162 bits (410), Expect = 2e-37
 Identities = 79/110 (71%), Positives = 88/110 (80%)
 Frame = -2

Query: 332 QRLVWGGFSCYFRRKDNYCKDESCTSNGNGYSFRPDTKTVVAVQGLSAAMAGGISALITM 153
           QRL+W G   Y       CK +  T      +FRPD+KTV+AVQG+SAAMAGG+SALITM
Sbjct: 228 QRLIWSGIGVYL------CKKDDETGENGVSTFRPDSKTVMAVQGVSAAMAGGVSALITM 281

Query: 152 PLDTIKTRLQVLDGDDNGRRPPTIGQTVRNLVREGGWAACYRGLGPRWAS 3
           PLDTIKTRLQVLDG++NGRR PTIGQTVRNLVREGGW ACYRGLGPRWAS
Sbjct: 282 PLDTIKTRLQVLDGEENGRRGPTIGQTVRNLVREGGWMACYRGLGPRWAS 331


>gb|AAM65995.1| mitochondrial carrier-like protein [Arabidopsis thaliana]
          Length = 342

 Score =  270 bits (689), Expect(2) = 1e-92
 Identities = 132/231 (57%), Positives = 169/231 (73%), Gaps = 6/231 (2%)
 Frame = -3

Query: 1012 AAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQTQVSS 833
            A    S+ ++H+  DIDW+MLDKS+FFFLGAALFSGVS  LYP+VVLKTRQQ+S T+VS 
Sbjct: 13   ATTSSSSSQVHMSNDIDWQMLDKSRFFFLGAALFSGVSTALYPIVVLKTRQQVSPTRVSC 72

Query: 832  VKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPEPTXX 653
               +++I + EG++G Y+GFGTSL+GTIPARALYMTALE+TKS+VG ATV+LG  + T  
Sbjct: 73   ANISLAIARLEGLKGFYKGFGTSLLGTIPARALYMTALEITKSSVGQATVRLGLSDTTSL 132

Query: 652  XXXXXXXXXXXXXXAQLVWTPVDVVSQRLMVQGGHNFNS------SSCKYRGGIDAFQKI 491
                          AQ VWTP+D+VSQRLMVQG  + +       +SC+YR G DAF+KI
Sbjct: 133  AVANGAAGLTSAVAAQTVWTPIDIVSQRLMVQGDVSLSKHLPGVMNSCRYRNGFDAFRKI 192

Query: 490  LKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDN 338
            L +DG RG YRGFG+SILTYAPSNAVWWASYS+ Q+ +W  +   +  K++
Sbjct: 193  LYTDGPRGFYRGFGISILTYAPSNAVWWASYSLAQKSIWSRYKHSYNHKED 243



 Score = 98.6 bits (244), Expect(2) = 1e-92
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 NGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNG-RRPPTIGQT 72
           + Y+ + D    V VQ LS+A A G SAL+TMP+DTIKTRLQVLD ++NG RR  T+ Q+
Sbjct: 236 HSYNHKEDAGGSVVVQALSSATASGCSALVTMPVDTIKTRLQVLDAEENGRRRAMTVMQS 295

Query: 71  VRNLVREGGWAACYRGLGPRWAS 3
           V++L++EGG  ACYRGLGPRW +
Sbjct: 296 VKSLMKEGGVGACYRGLGPRWVA 318


>ref|NP_197992.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana]
            gi|16604515|gb|AAL24263.1| AT5g26200/T19G15_50
            [Arabidopsis thaliana] gi|23308179|gb|AAN18059.1|
            At5g26200/T19G15_50 [Arabidopsis thaliana]
            gi|332006153|gb|AED93536.1| Mitochondrial substrate
            carrier family protein [Arabidopsis thaliana]
          Length = 342

 Score =  267 bits (682), Expect(2) = 2e-92
 Identities = 131/231 (56%), Positives = 168/231 (72%), Gaps = 6/231 (2%)
 Frame = -3

Query: 1012 AAEEDSAQEIHLPADIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQISQTQVSS 833
            A    S+ ++H+  DIDW+MLDKS+FFFLGAALFSGVS  LYP+VVLKTRQQ+S T+VS 
Sbjct: 13   ATTSSSSSQVHMSNDIDWQMLDKSRFFFLGAALFSGVSTALYPIVVLKTRQQVSPTRVSC 72

Query: 832  VKTAVSIVQHEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFPEPTXX 653
               +++I + EG++G Y+GFGTSL+GTIPARALYMTALE+TKS+VG ATV+LG  + T  
Sbjct: 73   ANISLAIARLEGLKGFYKGFGTSLLGTIPARALYMTALEITKSSVGQATVRLGLSDTTSL 132

Query: 652  XXXXXXXXXXXXXXAQLVWTPVDVVSQRLMVQGGHNFNS------SSCKYRGGIDAFQKI 491
                          AQ VWTP+D+VSQ LMVQG  + +       +SC+YR G DAF+KI
Sbjct: 133  AVANGAAGLTSAVAAQTVWTPIDIVSQGLMVQGDVSLSKHLPGVMNSCRYRNGFDAFRKI 192

Query: 490  LKSDGLRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGFSCYFRRKDN 338
            L +DG RG YRGFG+SILTYAPSNAVWWASYS+ Q+ +W  +   +  K++
Sbjct: 193  LYTDGPRGFYRGFGISILTYAPSNAVWWASYSLAQKSIWSRYKHSYNHKED 243



 Score =  100 bits (250), Expect(2) = 2e-92
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 NGYSFRPDTKTVVAVQGLSAAMAGGISALITMPLDTIKTRLQVLDGDDNG-RRPPTIGQT 72
           + Y+ + D    V VQ LSAA A G SAL+TMP+DTIKTRLQVLD ++NG RR  T+ Q+
Sbjct: 236 HSYNHKEDAGGSVVVQALSAATASGCSALVTMPVDTIKTRLQVLDAEENGRRRAMTVMQS 295

Query: 71  VRNLVREGGWAACYRGLGPRWAS 3
           V++L++EGG  ACYRGLGPRW S
Sbjct: 296 VKSLMKEGGVGACYRGLGPRWVS 318


Top