BLASTX nr result

ID: Coptis24_contig00009541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009541
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284106.1| PREDICTED: branched-chain-amino-acid aminotr...   537   e-150
ref|XP_002516560.1| D-alanine aminotransferase, putative [Ricinu...   507   e-141
ref|XP_003551118.1| PREDICTED: branched-chain-amino-acid aminotr...   496   e-138
ref|NP_001234878.1| 4-amino-4-deoxychorismate lyase [Solanum lyc...   490   e-136
ref|XP_004163194.1| PREDICTED: branched-chain-amino-acid aminotr...   488   e-135

>ref|XP_002284106.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic [Vitis vinifera]
            gi|296081877|emb|CBI20882.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  537 bits (1384), Expect = e-150
 Identities = 267/364 (73%), Positives = 310/364 (85%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1307 VFESGYKCFGLKVDGKSLWESRVLHNSEQIEEFIN---VSDVPLLSSSEVFKRLKEDREK 1137
            VF   +   GL    +S+    V+ NS Q E  ++   ++DVPLLS  E  +RLK  +E 
Sbjct: 27   VFTPRFSVLGLGF--RSISHGVVVRNSNQAEPLVDSTQIADVPLLSCLEAIERLKTSQEN 84

Query: 1136 RKGRQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHVDR 957
            +K +QQ+LAMYSS+FGGITTD   MVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQH+DR
Sbjct: 85   QKSKQQYLAMYSSIFGGITTDKAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDR 144

Query: 956  FLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLRYWLSVGPGDFQLSPSGCKQSAL 777
            FLRSASMAKI+ PFDRESIR ILIQTVSASKCR+GSLRYWLS GPGDFQLSPSGC+QSAL
Sbjct: 145  FLRSASMAKINPPFDRESIRGILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCQQSAL 204

Query: 776  YAIVIQDKTPLEREGVKVWTSTVPIKPPQFATMKSVNYLPNVLSKMEAEEKGGFAAIWLD 597
            YAIVIQD +P +++G+KV TS+VPIK PQFATMKSVNYLPNVLSKMEAEE G +AAIWLD
Sbjct: 205  YAIVIQDLSPFDQKGIKVVTSSVPIKTPQFATMKSVNYLPNVLSKMEAEENGSYAAIWLD 264

Query: 596  EDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARRALSLSEGLVREGRISGIRVGNV 417
            +DG+IAEGPNMNVAFVTKE EL+MP FDKILSGCTA+R L+L+EGL+REG++ GIRVGN+
Sbjct: 265  DDGFIAEGPNMNVAFVTKEKELVMPHFDKILSGCTAKRVLALAEGLMREGKLQGIRVGNL 324

Query: 416  TMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKVGPVVQALLDLILDDMKFGPTDVRV 237
            ++EEGK+A EMMLIGSG+LVRPVLQWD+ +IGDGK GPV  +LL+LILDDMK GP  VRV
Sbjct: 325  SVEEGKKADEMMLIGSGVLVRPVLQWDEHVIGDGKEGPVTLSLLNLILDDMKSGPPTVRV 384

Query: 236  PVPY 225
            PVPY
Sbjct: 385  PVPY 388


>ref|XP_002516560.1| D-alanine aminotransferase, putative [Ricinus communis]
            gi|223544380|gb|EEF45901.1| D-alanine aminotransferase,
            putative [Ricinus communis]
          Length = 318

 Score =  507 bits (1306), Expect = e-141
 Identities = 245/314 (78%), Positives = 284/314 (90%)
 Frame = -3

Query: 1172 EVFKRLKEDREKRKGRQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGHGVFDTAAIMD 993
            +  +RL+ +REK KG+QQFLAMYSS+FGGITTDP  MVIP+DDHMVHRGHGVFDTAAIMD
Sbjct: 4    KAMERLRTNREKHKGKQQFLAMYSSIFGGITTDPAAMVIPLDDHMVHRGHGVFDTAAIMD 63

Query: 992  GYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLRYWLSVGPGDF 813
            G+LYELDQH++R L SASMAKI++PF+RESIR ILIQTV+ASKC++GSLRYWLS GPGDF
Sbjct: 64   GHLYELDQHLNRILSSASMAKINLPFNRESIRKILIQTVTASKCQKGSLRYWLSAGPGDF 123

Query: 812  QLSPSGCKQSALYAIVIQDKTPLEREGVKVWTSTVPIKPPQFATMKSVNYLPNVLSKMEA 633
            QLSPSGC+Q ALYAIVIQD + L+ +GVKV TS+VPIKPP+FATMKSVNYLPNVLSKMEA
Sbjct: 124  QLSPSGCQQPALYAIVIQDHSQLDSKGVKVVTSSVPIKPPKFATMKSVNYLPNVLSKMEA 183

Query: 632  EEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARRALSLSEGLVR 453
            EE G FAAIWLD DG+IAEGPNMNVAFVTKE +L+MP FDKILSGCTARR L+L+EGLV+
Sbjct: 184  EENGAFAAIWLDNDGFIAEGPNMNVAFVTKEKDLIMPYFDKILSGCTARRVLALAEGLVK 243

Query: 452  EGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKVGPVVQALLDLIL 273
            EG++ G++VGN+T+EEGKQA EMMLIGSGILVRP +QWD+QIIGDGK GP+  ALL+LIL
Sbjct: 244  EGKLHGVKVGNLTIEEGKQADEMMLIGSGILVRPAVQWDEQIIGDGKEGPITMALLNLIL 303

Query: 272  DDMKFGPTDVRVPV 231
            +DMK GP  VRVPV
Sbjct: 304  EDMKSGPPAVRVPV 317


>ref|XP_003551118.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Glycine max]
          Length = 382

 Score =  496 bits (1277), Expect = e-138
 Identities = 243/328 (74%), Positives = 284/328 (86%), Gaps = 2/328 (0%)
 Frame = -3

Query: 1202 VSDVPLLSSSEVFKRLKEDREKRKGRQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGH 1023
            VS VPLL+S++ +++LK  RE  KG+QQFLAMYSS+FGGITTDP  MVIPMDDHMVHRGH
Sbjct: 55   VSRVPLLTSTQAYEKLKTFRENIKGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGH 114

Query: 1022 GVFDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLR 843
            GVFDTAAIMDGYLYELDQH+DRFLRSASM+KI  PFDR SIR ILIQTVSASKCR+GSLR
Sbjct: 115  GVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRGSIRRILIQTVSASKCRKGSLR 174

Query: 842  YWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLERE--GVKVWTSTVPIKPPQFATMKSV 669
            YWLS GPGDFQLSPS C +S+LYAIVIQD +P      GVKV TS++PIK P+FA  KSV
Sbjct: 175  YWLSAGPGDFQLSPSCCHRSSLYAIVIQDLSPSSPNFRGVKVVTSSIPIKHPKFAITKSV 234

Query: 668  NYLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTA 489
            NYLPNVLSK+EAEE G F  IWLD +G++AEGPNMNVAFVTK+ EL+MP FDKILSGCTA
Sbjct: 235  NYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKDKELIMPHFDKILSGCTA 294

Query: 488  RRALSLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKV 309
            +R L+L+E L+REG++ GIRV  VT+EEGKQA EMML+GSG+LV PV+QWD+Q+IGDGK 
Sbjct: 295  KRVLTLAESLLREGKLKGIRVKTVTVEEGKQADEMMLLGSGVLVCPVVQWDEQVIGDGKE 354

Query: 308  GPVVQALLDLILDDMKFGPTDVRVPVPY 225
            GP+ QALL+LI++DMK GP+ VR+PVPY
Sbjct: 355  GPITQALLNLIVEDMKSGPSTVRIPVPY 382


>ref|NP_001234878.1| 4-amino-4-deoxychorismate lyase [Solanum lycopersicum]
            gi|50345543|gb|AAT74744.1| 4-amino-4-deoxychorismate
            lyase [Solanum lycopersicum]
          Length = 395

 Score =  490 bits (1261), Expect = e-136
 Identities = 240/324 (74%), Positives = 278/324 (85%)
 Frame = -3

Query: 1196 DVPLLSSSEVFKRLKEDREKRKGRQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRGHGV 1017
            DVPLLS SEV +R++  RE  K +Q +LAMYSSVFGGITTD   MVIPMDDHMVHRGHGV
Sbjct: 72   DVPLLSCSEVIERMRTSREGYKTKQLYLAMYSSVFGGITTDTAAMVIPMDDHMVHRGHGV 131

Query: 1016 FDTAAIMDGYLYELDQHVDRFLRSASMAKISVPFDRESIRNILIQTVSASKCREGSLRYW 837
            FDTAAIMDGYLYELDQH+DRFL SA+MAKI +PFDRESIR ILI+TVS SKCR+GSLRYW
Sbjct: 132  FDTAAIMDGYLYELDQHLDRFLGSATMAKIQIPFDRESIRQILIRTVSVSKCRKGSLRYW 191

Query: 836  LSVGPGDFQLSPSGCKQSALYAIVIQDKTPLEREGVKVWTSTVPIKPPQFATMKSVNYLP 657
             S GPGDFQLS SGC Q+ LYAIVI+D++P +  G+KV TS++PIKP QFA MKSVNYLP
Sbjct: 192  FSAGPGDFQLSSSGCHQATLYAIVIKDQSPPDHNGIKVVTSSIPIKPLQFAVMKSVNYLP 251

Query: 656  NVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCTARRAL 477
            N LSKMEAEE   +AAIWLD DG++AEGPNMNVAFVTKE +LLMP FDKILSGCTA+R L
Sbjct: 252  NALSKMEAEENDAYAAIWLDGDGFVAEGPNMNVAFVTKEKDLLMPCFDKILSGCTAKRVL 311

Query: 476  SLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGKVGPVV 297
             L+E LV+EG++ GIRV NV++E+ K+A EMMLIGSGILVR V+QWD++IIG+G+ GPV 
Sbjct: 312  VLAENLVKEGKLRGIRVENVSVEDAKRADEMMLIGSGILVRSVVQWDEEIIGNGREGPVT 371

Query: 296  QALLDLILDDMKFGPTDVRVPVPY 225
            QALL+LIL+DMK GP  VRVPVPY
Sbjct: 372  QALLNLILEDMKSGPPTVRVPVPY 395


>ref|XP_004163194.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  488 bits (1257), Expect = e-135
 Identities = 237/329 (72%), Positives = 281/329 (85%), Gaps = 2/329 (0%)
 Frame = -3

Query: 1205 NVSDVPLLSSSEVFKRLKEDREKRKGRQQFLAMYSSVFGGITTDPTTMVIPMDDHMVHRG 1026
            + SD P+L+SSEV +RL+  RE ++ +QQ+LAMYSSVFGGITTDP  MVIP+DDHMVHRG
Sbjct: 10   HTSDAPVLTSSEVIERLRARRENQENQQQYLAMYSSVFGGITTDPAAMVIPIDDHMVHRG 69

Query: 1025 HGVFDTAAIMDGYLYELDQHVDRFLRSASMAKIS--VPFDRESIRNILIQTVSASKCREG 852
            HGVFDTA I+DGYLYELDQH+DR L+SASMAKI+  +P+DRE IR ILI+TVSASKCR G
Sbjct: 70   HGVFDTAIIVDGYLYELDQHLDRILKSASMAKINLPIPYDREMIRRILIRTVSASKCRNG 129

Query: 851  SLRYWLSVGPGDFQLSPSGCKQSALYAIVIQDKTPLEREGVKVWTSTVPIKPPQFATMKS 672
            SLRYWLS GPGDFQLS SGC  SALYA+VIQ K     +G+KV TS+VP+KPPQFA MKS
Sbjct: 130  SLRYWLSAGPGDFQLSSSGCHLSALYAVVIQGKPTSRPKGIKVITSSVPMKPPQFAIMKS 189

Query: 671  VNYLPNVLSKMEAEEKGGFAAIWLDEDGYIAEGPNMNVAFVTKENELLMPSFDKILSGCT 492
            VNYLPNVLSKMEAEEKG +A+IWLD DG+IAEGPNMNVAF+T + EL+MP FDKILSGCT
Sbjct: 190  VNYLPNVLSKMEAEEKGAYASIWLDSDGFIAEGPNMNVAFITSDKELIMPHFDKILSGCT 249

Query: 491  ARRALSLSEGLVREGRISGIRVGNVTMEEGKQACEMMLIGSGILVRPVLQWDDQIIGDGK 312
            A+R ++L+E LV+EG++  I   N+T+EEGK+A EMMLIGSG+LV PVLQWD+QIIGDGK
Sbjct: 250  AKRIINLAERLVKEGKLRSISCENITIEEGKKADEMMLIGSGVLVSPVLQWDEQIIGDGK 309

Query: 311  VGPVVQALLDLILDDMKFGPTDVRVPVPY 225
             GP+VQAL DL+++DM  GP  VRVPVPY
Sbjct: 310  EGPLVQALFDLLIEDMNSGPPTVRVPVPY 338


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