BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009539
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]   133   9e-29
ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   130   6e-28
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   127   5e-27
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   125   3e-26

>emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]
          Length = 603

 Score =  133 bits (334), Expect = 9e-29
 Identities = 108/319 (33%), Positives = 128/319 (40%), Gaps = 8/319 (2%)
 Frame = -2

Query: 942 RFSTCENHPDQTFTSFCPSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFNKNKAXXX 763
           R STC  HP + FT  C SC                                  N+A   
Sbjct: 11  RLSTCHRHPAEPFTGVCASCLRDRLAGFDPATRLEISVSPRVNDSGGVPLQRVANRASCP 70

Query: 762 XXXXXSFLPELRRXXXXXXXXXXXXXGVLVPQRKSCDVRGRSSLWNLFSQDDERKIENWR 583
                    E RR             G    +RKSCDV  RS+L +LF+ DDER   N  
Sbjct: 71  L--------EFRRCKSLSAGKCEVLPGSSEQRRKSCDVGVRSTLCDLFTLDDERNGSNRE 122

Query: 582 EIEVENRERGFSGNIXXXXXXXXXXXXXXXXXXXXXXXXXXEIRDPVNVNFXXXXXXXXX 403
           + +VE+R  GF                               +   VNV           
Sbjct: 123 KFQVESRNLGFQ-----RITAPVLESREEEENEEEIRGFEEVLASDVNV--------IDK 169

Query: 402 XXXXXXXXXXXKTMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXX 223
                      KTMK+HI +E     N+KP+ RD KDIAGSFW+AASVF           
Sbjct: 170 GIEEFEDNEEVKTMKEHIDLEW---KNRKPNVRDFKDIAGSFWLAASVFSKKLRKWRQKQ 226

Query: 222 XXXXXXXXXXXXSARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDD 67
                        A M+V+KP         SEIADYG GRRS D DPRFS+DAGR+S D 
Sbjct: 227 KMKKPSGSGHSLEA-MEVEKPIGKQIRETQSEIADYGLGRRSCDTDPRFSMDAGRISVDA 285

Query: 66  PRCSWDAPRASWDGYLTGR 10
           PR S+D  RASWDGYL GR
Sbjct: 286 PRYSFDEARASWDGYLMGR 304


>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  130 bits (327), Expect = 6e-28
 Identities = 73/128 (57%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
 Frame = -2

Query: 366 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 187
           TMKDHI ++   S NKKP GRDLK+IAGSFW AASVF                       
Sbjct: 238 TMKDHIDLD---SQNKKPPGRDLKEIAGSFWSAASVFSKKLQKWRRKQKMKKRDNGGGS- 293

Query: 186 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 31
            A + V+KP         SEIADYG+GRRS D DPRFSLDAGR+SFDDPR S+D PRASW
Sbjct: 294 -ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASW 352

Query: 30  DGYLTGRT 7
           DGYL GRT
Sbjct: 353 DGYLIGRT 360



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 48/143 (33%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
 Frame = -2

Query: 930 CENHPDQTFTSFCPSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFN----------- 784
           C+ HPD+ FT FCPSC                             A              
Sbjct: 24  CDRHPDEHFTGFCPSCLCERLAGLDQSSSARKSTSNSIATSSTAAAALKAIFKGSGGGPD 83

Query: 783 -KNKAXXXXXXXXSFLPELRRXXXXXXXXXXXXXGVLVPQRKSCDVRGRSSLWNLFSQDD 607
             N          SF PELRR             GV+ PQRKSCDVR R++LW LF+ DD
Sbjct: 84  KSNSYRHKPSSSSSFFPELRRTKSFSASKGEGFSGVVEPQRKSCDVRVRNTLWTLFNLDD 143

Query: 606 ER---KIENWREIEVENRERGFS 547
           ER   K E W E++V+ R  G S
Sbjct: 144 ERKGSKREAWGEVDVDTRNLGSS 166


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  127 bits (319), Expect = 5e-27
 Identities = 72/128 (56%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
 Frame = -2

Query: 366 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 187
           TMKDHI ++   S +KK SGRDLK+IAGSFW AASVF                       
Sbjct: 267 TMKDHIDLD---SQSKKTSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRNGGPGS 323

Query: 186 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 31
            A + V+KP         SEIADYG+GRRS D DPRFSLDAGR+SFDDPR S+D PRASW
Sbjct: 324 -ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASW 382

Query: 30  DGYLTGRT 7
           DGYL GRT
Sbjct: 383 DGYLIGRT 390


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  125 bits (315), Expect = 1e-26
 Identities = 71/128 (55%), Positives = 80/128 (62%), Gaps = 8/128 (6%)
 Frame = -2

Query: 366 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 187
           TMKDHI ++   S +KK SGRD K+IAGSFW AASVF                       
Sbjct: 213 TMKDHIDLD---SQSKKTSGRDFKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRNDGPGS 269

Query: 186 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 31
            A + V+KP         SEIADYG+GRRS D DPRFSLDAGR+SFDDPR S+D PRASW
Sbjct: 270 -ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASW 328

Query: 30  DGYLTGRT 7
           DGYL GRT
Sbjct: 329 DGYLIGRT 336


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  125 bits (313), Expect = 3e-26
 Identities = 70/130 (53%), Positives = 80/130 (61%), Gaps = 8/130 (6%)
 Frame = -2

Query: 366 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 187
           ++KDH+ ++   S  KKPSGRD K+IAGSFW AASVF                       
Sbjct: 253 SIKDHMDLD---SQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQKLKKRRNGDIS- 308

Query: 186 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 31
            A + V+KP         SEIADYGYGRRS D DPRFSLDAGRMSFDDPR S+D PRASW
Sbjct: 309 -ATLPVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLDAGRMSFDDPRYSFDEPRASW 367

Query: 30  DGYLTGRTLS 1
           DGYL  RT +
Sbjct: 368 DGYLVSRTFT 377