BLASTX nr result

ID: Coptis24_contig00009524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009524
         (1694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267...   281   3e-73
ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212...   270   1e-69
ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   267   7e-69
ref|XP_002303830.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-58
ref|XP_002530443.1| structural constituent of ribosome, putative...   230   1e-57

>ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267570 [Vitis vinifera]
          Length = 443

 Score =  281 bits (720), Expect = 3e-73
 Identities = 178/410 (43%), Positives = 237/410 (57%), Gaps = 47/410 (11%)
 Frame = -2

Query: 1564 SSSSSNDENNLTXXXXXXXXSYFNNTKSSLQ------------------NRKPPISTETN 1439
            SSSSS+  ++L+         YFN+ K+SL+                  +  PP+S++  
Sbjct: 45   SSSSSSSSSSLSS--------YFNDVKASLKQPPQPPRKSSSLFSSSSPSSSPPLSSKIA 96

Query: 1438 SMERIRQNLSQFQSKTAPP----------SNTVSLLGLYKKNVSEKGGEEVK-KTSFGSI 1292
            S+E IR+NLS+F+S+++ P          S+ +S   LYK+NV  K  +  K K SF +I
Sbjct: 97   SLEEIRKNLSEFRSRSSVPNPSPSQQSSSSSPISFQELYKRNVIPKPEDSPKGKLSFDAI 156

Query: 1291 LKNLQLLKHGNQNLKERDSGKTEDPYSLKQFQDTLKMKP------------GGGTSVPPS 1148
             ++L+ L+  +     +  GKT D  SL  FQD+L+++P            GG     P 
Sbjct: 157  RESLKQLRPSSSAEGGQTKGKT-DVLSLSAFQDSLRLRPVDSGATKSSVVIGGSDDALPM 215

Query: 1147 SMF------RKEETMKTRSVEYGRSYNYTELGEKLKQLRPTDVNGKNCFSFXXXXXXXXX 986
            S+F      RKE         + + Y   ELG+KL++LRP +   ++CFS          
Sbjct: 216  SVFGKDIRDRKEAESTAMKTSFVKWYGPEELGKKLRELRP-ETGAESCFSLKELNERLMK 274

Query: 985  XXXXEVKEMDARIGGVVAKDLRECLQTLKQTTEEKDKKSIVQRIEIVGSIGGTPNYMLQP 806
                E KE ++ I GV  KDLRE L  L+   +EK KKS  + ++I+G +GGTP++ML P
Sbjct: 275  LREMEEKETESSIPGVSFKDLRESLVRLRMADDEKTKKSSSE-LDILGRLGGTPSFMLAP 333

Query: 805  PKEQLVEKYFHPDNMSSAXXXXXXXXKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVL 626
            PKE LVE+YFHPDNMSSA        KVRDEFKMSESDCGS+RVQVAQLTTKIKHL+S L
Sbjct: 334  PKEHLVEQYFHPDNMSSAEKLKVELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLNSAL 393

Query: 625  HKKDKHSRKGLQEMVQXXXXXXXXXXRTDWESFCFCLDKLGLRDNPDYKN 476
            HKKDKHSRKGLQ MVQ          RTDW+S+C  L KLGLRDNP+YKN
Sbjct: 394  HKKDKHSRKGLQAMVQRRKKLLKYLRRTDWDSYCLVLSKLGLRDNPNYKN 443


>ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212028 [Cucumis sativus]
          Length = 449

 Score =  270 bits (689), Expect = 1e-69
 Identities = 181/451 (40%), Positives = 242/451 (53%), Gaps = 70/451 (15%)
 Frame = -2

Query: 1621 LTLQKLTKPKKI-----PIVTHLFSSSSS-----NDE--NNLTXXXXXXXXSYFNNTKSS 1478
            + LQ   KPK       P + HLFSS+SS     NDE  +  T        SY ++ ++ 
Sbjct: 1    MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60

Query: 1477 LQ----------------------NRKPPISTETNSMERIRQNLSQFQSKTA--PPSNT- 1373
            L+                      NR    +++  S+E IR+NLS+F+++++  PPS+  
Sbjct: 61   LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120

Query: 1372 ------------VSLLGLYKKNVSEKGGEEVKKTS-----------FGSILKNLQLLKHG 1262
                        +S   LYK N   KG +     +           F SI ++L+ +   
Sbjct: 121  STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180

Query: 1261 NQNLKERDSGKTEDPYSLKQFQDTLKMKPG----GGTSVPPSSMFRKEETMKTRS----- 1109
                 E  SG   D  SL  F+D+LK+KP     GGT   P S+F KE   K        
Sbjct: 181  RGMQSELKSG---DSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKKDGKNVGL 237

Query: 1108 -VEYGRSYNYTELGEKLKQLRPTDVNGKNCFSFXXXXXXXXXXXXXEVKEMDARIGGVVA 932
              E+ + Y+Y ELG KL+ LRP    GKN FS              E KE ++RIGG+  
Sbjct: 238  KTEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISF 297

Query: 931  KDLRECLQTLKQTTEEKDKKSIVQRIEIVGSIGGTPNYMLQPPKEQLVEKYFHPDNMSSA 752
            +DLR  L  +K + +E++KK+ +QR++I+G +  TPNYML+PP E LVEKYFHPDNMSSA
Sbjct: 298  QDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSA 357

Query: 751  XXXXXXXXKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXX 572
                    KVR++FKMSESDCGS+RVQVAQLTTKI HL++VLHKKDKHS+KGL  MVQ  
Sbjct: 358  EKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQR 417

Query: 571  XXXXXXXXRTDWESFCFCLDKLGLRDNPDYK 479
                    RTDW+S+C  L+ LGLRDNPDYK
Sbjct: 418  KKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 448


>ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229401
            [Cucumis sativus]
          Length = 449

 Score =  267 bits (682), Expect = 7e-69
 Identities = 181/451 (40%), Positives = 242/451 (53%), Gaps = 70/451 (15%)
 Frame = -2

Query: 1621 LTLQKLTKPKKI-----PIVTHLFSSSSS-----NDE--NNLTXXXXXXXXSYFNNTKSS 1478
            + LQ   KPK       P + HLFSS+SS     NDE  +  T        SY ++ ++ 
Sbjct: 1    MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60

Query: 1477 LQ----------------------NRKPPISTETNSMERIRQNLSQFQSKTA--PPSNT- 1373
            L+                      NR    +++  S+E IR+NLS+F+++++  PPS+  
Sbjct: 61   LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120

Query: 1372 ------------VSLLGLYKKNVSEKGGEEVKKTS-----------FGSILKNLQLLKHG 1262
                        +S   LYK N   KG +     +           F SI ++L+ +   
Sbjct: 121  STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180

Query: 1261 NQNLKERDSGKTEDPYSLKQFQDTLKMKPG----GGTSVPPSSMFRKEETMKTRS----- 1109
                 E  SG   D  SL  F+D+LK+KP     GGT   P S+F KE   K        
Sbjct: 181  RGMQSELKSG---DSLSLSAFKDSLKLKPSDPVMGGTERLPVSVFGKEMKEKDGKNVGLK 237

Query: 1108 VEYGRSYNYTELGEKLKQLRPTDVNGKNCFSFXXXXXXXXXXXXXEVKEMDARIGGVVAK 929
             E+ + Y+Y ELG KL+ LRP    GKN FS              E KE ++RIGG+  +
Sbjct: 238  TEFVKMYSYDELGNKLRNLRPDKEKGKNWFSLTELNDRLVKLRTMEEKETESRIGGISFQ 297

Query: 928  DLRECLQTLKQTTEEKDKKS-IVQRIEIVGSIGGTPNYMLQPPKEQLVEKYFHPDNMSSA 752
            DLR  L  +K + +E++KK  ++QR++I+G +  TPNYML+PP E LVEKYFHPDNMSSA
Sbjct: 298  DLRASLMQMKISDDEREKKRHVIQRLDIMGQLVRTPNYMLEPPNEHLVEKYFHPDNMSSA 357

Query: 751  XXXXXXXXKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXX 572
                    KVR++FKMSESDCGS+RVQVAQLTTKI HL++VLHKKDKHS+KGL  MVQ  
Sbjct: 358  EKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKDKHSKKGLLGMVQQR 417

Query: 571  XXXXXXXXRTDWESFCFCLDKLGLRDNPDYK 479
                    RTDW+S+C  L+ LGLRDNPDYK
Sbjct: 418  KKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 448


>ref|XP_002303830.1| predicted protein [Populus trichocarpa] gi|222841262|gb|EEE78809.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  231 bits (588), Expect = 6e-58
 Identities = 169/455 (37%), Positives = 229/455 (50%), Gaps = 86/455 (18%)
 Frame = -2

Query: 1585 PIVTHLFSSSSSNDENNLTXXXXXXXXS-----------------YFNNTKSSLQNRKP- 1460
            P + HLFSSSS+   ++ +                          YFN+ K+SL+ + P 
Sbjct: 16   PYLIHLFSSSSTTPSDDPSVSEPQQQQQQQQQQQQQQQQKSSLSSYFNDVKASLKQQNPE 75

Query: 1459 ------PIST---ETN-----------SMERIRQNLSQFQSKTAPP-------------- 1382
                  P+S     TN           S + IR+NLS+F+ +++ P              
Sbjct: 76   NRPNSPPLSKPSYSTNQSFSKPTSNIASFDEIRKNLSEFRLRSSDPPPREPNSAPSQEPS 135

Query: 1381 -SNTVSLLGLYKKNV----------SEKGGEEVK-----KTSFGSILKNLQLLKHGNQNL 1250
                +S   LYK+NV          ++ GG         + +F +I ++L+ +K G  N 
Sbjct: 136  SKQQISFQELYKRNVLARSTGGSGTTQSGGINANQPISGRLTFDAIRESLRQMKGGGDNN 195

Query: 1249 KERDSGKTEDPYSLKQFQDTLKMKPG------------GGTSVPPSSMFRKEETMK---- 1118
                        S   F    K+KPG            GGT   PS++F +E   +    
Sbjct: 196  NTAAGRGRVGELSFSSF----KLKPGNENEPMNKSTIIGGTEGLPSAVFGREMEGEGGAK 251

Query: 1117 -TRSVEYGRSYNYTELGEKLKQLRPTDVNG-KNCFSFXXXXXXXXXXXXXEVKEMDARIG 944
               S E+ + Y++ ELG+KL+ LRP    G K  F+              E KE ++RI 
Sbjct: 252  GEMSTEFVKMYSHGELGDKLRILRPKVKRGEKGWFTLKELNERLRKLREMEEKETESRIS 311

Query: 943  GVVAKDLRECLQTLKQTTEEKDKKSIVQRIEIVGSIGGTPNYMLQPPKEQLVEKYFHPDN 764
            GV  +DLRE L  LK +++EK  K+ VQR+ ++G +  + N  LQPPK+ LVEKYFHPDN
Sbjct: 312  GVSFRDLRESLVKLKASSDEKAIKNSVQRLNLMGQLRAS-NVTLQPPKKHLVEKYFHPDN 370

Query: 763  MSSAXXXXXXXXKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEM 584
            MSS+        +VRDEFKMSESDCGS+RVQVA LTTKIKHLSSVL+KKDKHSRKGL  M
Sbjct: 371  MSSSEKMKIELARVRDEFKMSESDCGSARVQVALLTTKIKHLSSVLNKKDKHSRKGLIGM 430

Query: 583  VQXXXXXXXXXXRTDWESFCFCLDKLGLRDNPDYK 479
            VQ          RTDW+S+C  L KLGLRDNPD+K
Sbjct: 431  VQKRKKLLKYLRRTDWDSYCLVLSKLGLRDNPDHK 465


>ref|XP_002530443.1| structural constituent of ribosome, putative [Ricinus communis]
            gi|223529988|gb|EEF31913.1| structural constituent of
            ribosome, putative [Ricinus communis]
          Length = 461

 Score =  230 bits (586), Expect = 1e-57
 Identities = 174/459 (37%), Positives = 239/459 (52%), Gaps = 83/459 (18%)
 Frame = -2

Query: 1606 LTKPKKI----PIVTHLFSSSSSNDEN------------NLTXXXXXXXXSYFNNTKSSL 1475
            +T+PK      P + HLFS+SSS ++N                       SYF++ K+SL
Sbjct: 5    ITRPKHRSLTNPSLIHLFSTSSSQNDNASLSPPSQEQQQQQQQQQQTSFSSYFSDVKASL 64

Query: 1474 QNRK-----------PPISTETN---------SMERIRQNLSQFQSKTAPPSNT------ 1373
            + ++           PP+ T  +         S+E I++NL++++ +++ P  T      
Sbjct: 65   KQQQQDPQSQNKPNFPPLRTPASISKPTSKIASLEEIKKNLAEYRLRSSVPPPTESSSFN 124

Query: 1372 -------------VSLLGLYKKNV---------SEKGGEEVKKTSFG-----SILKNLQL 1274
                         +S   LYK+N+         S+ G  +  K + G     +I ++L+ 
Sbjct: 125  TTFSDQQQRQTQHISFQDLYKRNMIGKSENFSGSDNGSNKSNKPASGRFSMDAIRESLRQ 184

Query: 1273 LKHGNQNLK----ERDSGK------TEDPYSLKQFQDTLKMKPGGGTSVPPS--SMFRKE 1130
            +K  N N K     R+ G       +     L +  ++LK    GG+   PS  S+ ++ 
Sbjct: 185  MK-SNANTKIDGSRRNDGDAMSFSGSRSSLKLSKEIESLKSSVVGGSGGMPSLVSVNKQR 243

Query: 1129 ETMKTRSVEYGRSYNYTELGEKLKQLRPTDVNG-KNCFSFXXXXXXXXXXXXXEVKEMDA 953
                  S E+ ++Y+Y ELGEKL  LR     G K  FS              E KE ++
Sbjct: 244  NVQGGMSTEFRKAYSYGELGEKLMSLRSEVKEGEKGWFSLEELNERLRKLREIEEKEYES 303

Query: 952  RIGGVVAKDLRECLQTLKQTTEEKDKKSI-VQRIEIVGSIGGTPNYMLQPPKEQLVEKYF 776
            RIGG  +  +RE L  LK   E+ +K SI +QR+ +  +   TP++M  PPKE LVEKYF
Sbjct: 304  RIGGYYS-GIRESLIKLKD--EKAEKSSIPIQRLNLFST---TPDFMQYPPKEHLVEKYF 357

Query: 775  HPDNMSSAXXXXXXXXKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKG 596
            HPDNMSSA        KVR+EFKMSESDCGS+RVQVAQLTTKIKHLSSVLHKKDKHSRKG
Sbjct: 358  HPDNMSSAEKMKIGLSKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKG 417

Query: 595  LQEMVQXXXXXXXXXXRTDWESFCFCLDKLGLRDNPDYK 479
            LQEMVQ          RTDW+S+CF L KLGLRDNPD+K
Sbjct: 418  LQEMVQKRKKLLKYLRRTDWDSYCFVLSKLGLRDNPDFK 456


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