BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009512
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]             78   6e-13
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780...    77   1e-12
emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]    75   5e-12
emb|CAN63969.1| hypothetical protein VITISV_007954 [Vitis vinifera]    74   2e-11
emb|CAN70205.1| hypothetical protein VITISV_028313 [Vitis vinifera]    72   4e-11

>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
          Length = 1902

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/84 (44%), Positives = 51/84 (60%)
 Frame = +2

Query: 29  PHNDALVVHVKISDWTVKRVLIDPGSSCDILFYHTMQEMNLPKSVLVDPIAPLYGFNGSR 208
           PH DA+V+   ++ WTV ++L+D GSS DILF  T   M L +++L     PLYGF G +
Sbjct: 658 PHTDAMVIETNLAGWTVTKILVDTGSSADILFASTFDSMKLDRNLLQPADNPLYGFGGQQ 717

Query: 209 ADPIGDIILPVSVGSREDKITCNT 280
              +G I LPV+ G   D+I C T
Sbjct: 718 VRAVGKISLPVTFG---DQINCRT 738


>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
           [Sorghum bicolor]
          Length = 1877

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/90 (42%), Positives = 52/90 (57%)
 Frame = +2

Query: 2   EADLSKVCLPHNDALVVHVKISDWTVKRVLIDPGSSCDILFYHTMQEMNLPKSVLVDPIA 181
           E DL     PH DALV+   ++ W V R+L+D GSS DI+F  T  +M L +S L    +
Sbjct: 624 EEDLRLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQLQPSES 683

Query: 182 PLYGFNGSRADPIGDIILPVSVGSREDKIT 271
           PL GF G +   +G + LPVS G+ E+  T
Sbjct: 684 PLIGFGGKQIHALGKVALPVSFGTTENART 713


>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/81 (43%), Positives = 52/81 (64%)
 Frame = +2

Query: 8   DLSKVCLPHNDALVVHVKISDWTVKRVLIDPGSSCDILFYHTMQEMNLPKSVLVDPIAPL 187
           D ++V  PH DAL++ + + D+ VKR+L+DPGSS D+L    +++M    S L +P   L
Sbjct: 469 DPAQVLQPHRDALILTLGVGDFDVKRILVDPGSSADLLQVAVIKQMGFIPSSLENPERTL 528

Query: 188 YGFNGSRADPIGDIILPVSVG 250
           +GFNGS    +GD+ LPV  G
Sbjct: 529 FGFNGSSTTSLGDVTLPVQAG 549


>emb|CAN63969.1| hypothetical protein VITISV_007954 [Vitis vinifera]
          Length = 451

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/81 (44%), Positives = 52/81 (64%)
 Frame = +2

Query: 8   DLSKVCLPHNDALVVHVKISDWTVKRVLIDPGSSCDILFYHTMQEMNLPKSVLVDPIAPL 187
           DL++V  PH DALV+ + I D+ VKR+L+DPGSS D+L    +++M    S L +P   L
Sbjct: 285 DLARVLQPHRDALVMTLGIRDFDVKRILVDPGSSADLLQVSVVKQMGFIPSSLENPGRML 344

Query: 188 YGFNGSRADPIGDIILPVSVG 250
            GFNG+    +GD+IL +  G
Sbjct: 345 SGFNGASTTSLGDVILSIQAG 365


>emb|CAN70205.1| hypothetical protein VITISV_028313 [Vitis vinifera]
          Length = 481

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/81 (41%), Positives = 52/81 (64%)
 Frame = +2

Query: 8   DLSKVCLPHNDALVVHVKISDWTVKRVLIDPGSSCDILFYHTMQEMNLPKSVLVDPIAPL 187
           DL+++  PH DAL++ ++I D+ V+R+L+DPGSS D++    +  M      L +P   L
Sbjct: 339 DLTQILHPHRDALILSLEIGDFDVRRILVDPGSSADLVQASVVSHMGHNLIGLENPGRIL 398

Query: 188 YGFNGSRADPIGDIILPVSVG 250
           +GFNGS    +GDI+LPV  G
Sbjct: 399 FGFNGSSTTSLGDIVLPVQAG 419