BLASTX nr result
ID: Coptis24_contig00009508
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009508
(1658 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2... 249 e-121
ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins f... 239 e-119
ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins f... 239 e-119
emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera] 239 e-119
ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins f... 240 e-117
>ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1|
predicted protein [Populus trichocarpa]
Length = 342
Score = 249 bits (636), Expect(3) = e-121
Identities = 120/176 (68%), Positives = 137/176 (77%), Gaps = 14/176 (7%)
Frame = -2
Query: 1360 LLSCLVGVLIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEP 1214
+ SCL G L +ASAGDS P Y+ CV QC+++GCV D +++DGPWY QEP
Sbjct: 12 VFSCLGGTL-DASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGPWYKQEP 70
Query: 1213 LYLQW---DCQSNCRYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLN 1043
LYLQW DCQS+CRY+CML E ERE LG GPVKYHGKWPFKRV GIQEPVSVAFS LN
Sbjct: 71 LYLQWKQWDCQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSVAFSALN 130
Query: 1042 LAMQFHGWLSFFILLYHKLPLRPQTRKPYYEYAGLWLMYGFLAMNSWVWSAVFHSR 875
LAM FHGWLSFFILLY+KLPL+ Q +K YYEYA LW +YGFL++NSW WSAVFHSR
Sbjct: 131 LAMHFHGWLSFFILLYYKLPLK-QDKKAYYEYASLWHIYGFLSLNSWFWSAVFHSR 185
Score = 129 bits (324), Expect(3) = e-121
Identities = 63/78 (80%), Positives = 72/78 (92%)
Frame = -1
Query: 821 DVDLTEKLDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKL 642
DVDLTEKLDYSSAVA LGYSLI++ILR+FNVRDEAARVMVAAPL+AF+TTHIL++N +KL
Sbjct: 186 DVDLTEKLDYSSAVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFYKL 245
Query: 641 DYGLNMIVCVAMGIAQLL 588
DYG NM VCV M +AQLL
Sbjct: 246 DYGWNMQVCVVMAVAQLL 263
Score = 108 bits (269), Expect(3) = e-121
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -3
Query: 471 VVLATSLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWWSFIKDDAKFRTTDSVKKVK 292
VV+ LAMLLEIYDFPPY+GYVDAHALWHATTIP+TY+WWSFI+DDA+FRT++ +KK K
Sbjct: 283 VVIGGGLAMLLEIYDFPPYEGYVDAHALWHATTIPLTYIWWSFIRDDAEFRTSNLLKKTK 342
>ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis
vinifera] gi|296082755|emb|CBI21760.3| unnamed protein
product [Vitis vinifera]
Length = 379
Score = 239 bits (611), Expect(3) = e-119
Identities = 114/168 (67%), Positives = 127/168 (75%), Gaps = 14/168 (8%)
Frame = -2
Query: 1336 LIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QW 1199
+ EAS GD+ P Y+ CVEQC++TGCV D VDGPWY+QEPLYL QW
Sbjct: 56 VFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQW 115
Query: 1198 DCQSNCRYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGW 1019
DCQS+CRY+CML E ERE LG GPVKYHGKWPFKRV GIQEP SVA S LNLAMQFHGW
Sbjct: 116 DCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGW 175
Query: 1018 LSFFILLYHKLPLRPQTRKPYYEYAGLWLMYGFLAMNSWVWSAVFHSR 875
LSFFILL +KLPL+P +K YYEY LW +YG L+MNSW WSAVFHSR
Sbjct: 176 LSFFILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSR 222
Score = 130 bits (328), Expect(3) = e-119
Identities = 66/78 (84%), Positives = 72/78 (92%)
Frame = -1
Query: 821 DVDLTEKLDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKL 642
DVDLTEKLDYSSAVALLG+SLILAILR+FNVR EAARVMV+APL+AFVTTHILYLN +K
Sbjct: 223 DVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKF 282
Query: 641 DYGLNMIVCVAMGIAQLL 588
DYG NM VCV MG+AQLL
Sbjct: 283 DYGWNMKVCVVMGVAQLL 300
Score = 107 bits (266), Expect(3) = e-119
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -3
Query: 471 VVLATSLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWWSFIKDDAKFRTTDSVKKVK 292
VV+ LAMLLEIYDFPPY+G+VDAHALWHATTIP+TY+WWSFIKDDA+F+T + +KKVK
Sbjct: 320 VVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 379
>ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis
vinifera]
Length = 342
Score = 239 bits (611), Expect(3) = e-119
Identities = 114/168 (67%), Positives = 127/168 (75%), Gaps = 14/168 (8%)
Frame = -2
Query: 1336 LIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QW 1199
+ EAS GD+ P Y+ CVEQC++TGCV D VDGPWY+QEPLYL QW
Sbjct: 19 VFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQW 78
Query: 1198 DCQSNCRYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGW 1019
DCQS+CRY+CML E ERE LG GPVKYHGKWPFKRV GIQEP SVA S LNLAMQFHGW
Sbjct: 79 DCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGW 138
Query: 1018 LSFFILLYHKLPLRPQTRKPYYEYAGLWLMYGFLAMNSWVWSAVFHSR 875
LSFFILL +KLPL+P +K YYEY LW +YG L+MNSW WSAVFHSR
Sbjct: 139 LSFFILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSR 185
Score = 130 bits (328), Expect(3) = e-119
Identities = 66/78 (84%), Positives = 72/78 (92%)
Frame = -1
Query: 821 DVDLTEKLDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKL 642
DVDLTEKLDYSSAVALLG+SLILAILR+FNVR EAARVMV+APL+AFVTTHILYLN +K
Sbjct: 186 DVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKF 245
Query: 641 DYGLNMIVCVAMGIAQLL 588
DYG NM VCV MG+AQLL
Sbjct: 246 DYGWNMKVCVVMGVAQLL 263
Score = 107 bits (266), Expect(3) = e-119
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -3
Query: 471 VVLATSLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWWSFIKDDAKFRTTDSVKKVK 292
VV+ LAMLLEIYDFPPY+G+VDAHALWHATTIP+TY+WWSFIKDDA+F+T + +KKVK
Sbjct: 283 VVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 342
>emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]
Length = 342
Score = 239 bits (611), Expect(3) = e-119
Identities = 114/168 (67%), Positives = 127/168 (75%), Gaps = 14/168 (8%)
Frame = -2
Query: 1336 LIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QW 1199
+ EAS GD+ P Y+ CVEQC++TGCV D VDGPWY+QEPLYL QW
Sbjct: 19 VFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQW 78
Query: 1198 DCQSNCRYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGW 1019
DCQS+CRY+CML E ERE LG GPVKYHGKWPFKRV GIQEP SVA S LNLAMQFHGW
Sbjct: 79 DCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGW 138
Query: 1018 LSFFILLYHKLPLRPQTRKPYYEYAGLWLMYGFLAMNSWVWSAVFHSR 875
LSFFILL +KLPL+P +K YYEY LW +YG L+MNSW WSAVFHSR
Sbjct: 139 LSFFILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSR 185
Score = 130 bits (328), Expect(3) = e-119
Identities = 66/78 (84%), Positives = 72/78 (92%)
Frame = -1
Query: 821 DVDLTEKLDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKL 642
DVDLTEKLDYSSAVALLG+SLILAILR+FNVR EAARVMV+APL+AFVTTHILYLN +K
Sbjct: 186 DVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKF 245
Query: 641 DYGLNMIVCVAMGIAQLL 588
DYG NM VCV MG+AQLL
Sbjct: 246 DYGWNMKVCVVMGVAQLL 263
Score = 107 bits (266), Expect(3) = e-119
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -3
Query: 471 VVLATSLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWWSFIKDDAKFRTTDSVKKVK 292
VV+ LAMLLEIYDFPPY+G+VDAHALWHATTIP+TY+WWSFIKDDA+F+T + +KKVK
Sbjct: 283 VVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 342
>ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera]
gi|147785290|emb|CAN61923.1| hypothetical protein
VITISV_036651 [Vitis vinifera]
gi|297741118|emb|CBI31849.3| unnamed protein product
[Vitis vinifera]
Length = 342
Score = 240 bits (612), Expect(3) = e-117
Identities = 116/175 (66%), Positives = 133/175 (76%), Gaps = 14/175 (8%)
Frame = -2
Query: 1357 LSCLVGVLIEASAGDSHPRYQVCVEQCKETGCVKDKL-----------AVDGPWYVQEPL 1211
LS LV VL ASAGDS P Y+ C+EQC++TGCV DK + GPWY+QEPL
Sbjct: 13 LSFLVRVL-NASAGDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPWYLQEPL 71
Query: 1210 YL---QWDCQSNCRYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNL 1040
YL QWDC+S+CRYHCML E ERE LG PVKYHGKWPF+RV GIQEPVSVA + LNL
Sbjct: 72 YLRWKQWDCRSDCRYHCMLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVALATLNL 131
Query: 1039 AMQFHGWLSFFILLYHKLPLRPQTRKPYYEYAGLWLMYGFLAMNSWVWSAVFHSR 875
AMQFHGW+SF ILLY+KLPLRP +K +YEY GLW +YG LAMN+W W+AVFHSR
Sbjct: 132 AMQFHGWVSFLILLYYKLPLRPD-KKTFYEYTGLWHIYGILAMNAWFWNAVFHSR 185
Score = 134 bits (338), Expect(3) = e-117
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = -1
Query: 821 DVDLTEKLDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKL 642
DVDLTEKLDYSS VALLG++LILAILR FNVRDEAARVM+AAPL+AFVTTHILYLN +KL
Sbjct: 186 DVDLTEKLDYSSGVALLGFTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKL 245
Query: 641 DYGLNMIVCVAMGIAQLL 588
DYGLNM VC+ MGIAQLL
Sbjct: 246 DYGLNMKVCLTMGIAQLL 263
Score = 98.2 bits (243), Expect(3) = e-117
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = -3
Query: 471 VVLATSLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWWSFIKDDAKFRTTDSVKKVK 292
VV+ +LAM LEIYDFPPY G+VDAHA+WHA IP TYLWWSF+KDD++FRT+ +KKVK
Sbjct: 283 VVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPFTYLWWSFVKDDSEFRTSALMKKVK 342