BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009505
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vi...   175   1e-41
ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|2...   169   6e-40
ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vi...   168   1e-39
ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39
gb|AFK47240.1| unknown [Medicago truncatula]                          162   7e-38

>ref|XP_002285053.2| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  175 bits (443), Expect = 1e-41
 Identities = 93/184 (50%), Positives = 118/184 (64%), Gaps = 25/184 (13%)
 Frame = +3

Query: 207 MKRP----PNAQEHEEKLKKRRIIQQEEEKQKLGCEAEFHNLNQDMLFEILKHVDAPTLA 374
           MKRP     + +  ++K+K  ++   EE+ +  G    F NL++++L+E+LKHVDA TLA
Sbjct: 1   MKRPFVADDDLESADQKMKNPKLEDDEEDGEVRGETTGFVNLDENLLYEVLKHVDARTLA 60

Query: 375 KASCVNKKWQKTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLK 554
            A CV+K W +TS DERLWE++CTRHW NIGC  +QVRSVVLA GGFR LHSLYL P+ K
Sbjct: 61  IAGCVSKLWHRTSQDERLWELICTRHWANIGCGNQQVRSVVLALGGFRRLHSLYLWPLSK 120

Query: 555 ---------------ATALS------QYQSSTIPNKWGKDEVHLSLSLLSIRYYEMMDCN 671
                          +TALS             P +WGKDEVHLSLSLLSIRYYE M+ N
Sbjct: 121 PQASSSSSPPSSSWPSTALSPPFAPHSMMRPKFPTRWGKDEVHLSLSLLSIRYYEKMNFN 180

Query: 672 YKGR 683
            +GR
Sbjct: 181 NRGR 184


>ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|222835498|gb|EEE73933.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  169 bits (429), Expect = 6e-40
 Identities = 89/183 (48%), Positives = 121/183 (66%), Gaps = 24/183 (13%)
 Frame = +3

Query: 207 MKRPPNA-----QEHEEKLKKRRIIQQEEEKQKLGCEAE----FHNLNQDMLFEILKHVD 359
           MKRP +       + + K+KK+R  ++ E K+++  E      F NL++++LFE+LKHVD
Sbjct: 1   MKRPLDTGPEIHNKTDMKMKKKRHQEEGEIKEEIESETNTGTGFMNLDENLLFEVLKHVD 60

Query: 360 APTLAKASCVNKKWQKTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYL 539
           A TL +ASCV+K+W +T  DERLWE++CT+HW NIGC  +Q+RSVVLA GGFR LHS YL
Sbjct: 61  ARTLGRASCVSKQWHRTVQDERLWELICTKHWANIGCGNQQLRSVVLALGGFRRLHSQYL 120

Query: 540 RPVLKATALSQYQSSTIPN---------------KWGKDEVHLSLSLLSIRYYEMMDCNY 674
            P+ K  +     SS+ P+               +WGKDEVHLSLSLLSIRYYE M+ + 
Sbjct: 121 WPLSKPHSTPAPSSSSSPSAWNPFPKMIGNKPPARWGKDEVHLSLSLLSIRYYEKMNFSN 180

Query: 675 KGR 683
           +GR
Sbjct: 181 RGR 183


>ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  168 bits (426), Expect = 1e-39
 Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 22/166 (13%)
 Frame = +3

Query: 249 KKRRIIQQEEEKQKLGCEAEFHNLNQDMLFEILKHVDAPTLAKASCVNKKWQKTSNDERL 428
           ++RR ++  EE  ++  E  F NL++D+LFE+LKHVDA TLA A+CV+++W++T++DERL
Sbjct: 18  RQRRQVEGGEEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERL 77

Query: 429 WEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLK-----ATALSQYQSST-- 587
           WEM+CTRHW N+GC  +Q+RSVVLA GGFR LH+L L P+LK     +++ S Y +S+  
Sbjct: 78  WEMICTRHWANVGCGTQQLRSVVLALGGFRRLHALCLWPLLKSPPSSSSSPSPYTTSSHS 137

Query: 588 ---------------IPNKWGKDEVHLSLSLLSIRYYEMMDCNYKG 680
                           P +WGKDEVHLSLSLLSIR+YE M    KG
Sbjct: 138 PQSSPFSPPVVPSKKAPTRWGKDEVHLSLSLLSIRFYEKMSSKSKG 183


>ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|222842886|gb|EEE80433.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  167 bits (422), Expect = 4e-39
 Identities = 87/175 (49%), Positives = 117/175 (66%), Gaps = 19/175 (10%)
 Frame = +3

Query: 216 PPNAQEHEEKLKKRRIIQQEEEKQKLGCEAE----FHNLNQDMLFEILKHVDAPTLAKAS 383
           P N  + + K+KK+R  Q++E K+++         F NL++++LFE+LKHVDA TL  A+
Sbjct: 9   PGNQNKIDIKMKKKRY-QEDENKEEIESAVNTGSGFMNLDENLLFEVLKHVDARTLGSAA 67

Query: 384 CVNKKWQKTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLKATA 563
           CV+K+W +T  DERLWE+VCT+HW N+GC  +Q+RSVVLA GGFR LHS YL P+ K  +
Sbjct: 68  CVSKQWHRTVQDERLWELVCTKHWGNMGCGNQQMRSVVLALGGFRRLHSQYLWPLSKPQS 127

Query: 564 LSQYQSSTI---------------PNKWGKDEVHLSLSLLSIRYYEMMDCNYKGR 683
            S   +ST                P +WGKDEVHLSLSLLSIRYYE M+ + +GR
Sbjct: 128 NSAGSASTSSSAWNPFSPMIGNKPPARWGKDEVHLSLSLLSIRYYEKMNFSNRGR 182


>gb|AFK47240.1| unknown [Medicago truncatula]
          Length = 174

 Score =  162 bits (411), Expect = 7e-38
 Identities = 88/171 (51%), Positives = 115/171 (67%), Gaps = 16/171 (9%)
 Frame = +3

Query: 207 MKRPPNAQEHEEKLKKRRIIQQEEEKQKLGCEAE--FHNLNQDMLFEILKHVDAPTLAKA 380
           MKR  +++ +E++ K +R+ ++E EK    CE      + +++MLFE+LKHVDA TLA +
Sbjct: 1   MKRSLSSEANEDR-KMKRVKEEESEKIDGVCEKNRGLASFDENMLFEVLKHVDARTLAMS 59

Query: 381 SCVNKKWQKTSNDERLWEMVCTRHWVNIGCPEEQVRSVVLAFGGFRLLHSLYLRPVLKAT 560
           SCVNK+W KT+ DERLWE++CT+ W N GC E+Q+RSVVLA GGFR LHSLYL P+ K  
Sbjct: 60  SCVNKQWHKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQ 119

Query: 561 ALSQYQSST------IPN--------KWGKDEVHLSLSLLSIRYYEMMDCN 671
             S    S+      IP         + GKDEVHLSLSLLSIRYYE M+ N
Sbjct: 120 TSSSSSCSSSSSWGPIPQVIKSKPLPRLGKDEVHLSLSLLSIRYYEKMNFN 170