BLASTX nr result

ID: Coptis24_contig00009440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009440
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan ancho...    57   1e-06
ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan ancho...    57   2e-06
ref|XP_003525538.1| PREDICTED: phosphatidylinositol glycan ancho...    57   2e-06

>ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein [Vitis vinifera] gi|297742569|emb|CBI34718.3|
           unnamed protein product [Vitis vinifera]
          Length = 474

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/40 (57%), Positives = 33/40 (82%)
 Frame = +2

Query: 29  FSWRPVIYFLLRAAIWSFYTLFVCNISLQQYGGLSKMFKS 148
           FSWR V++F+L A++WS Y L +C IS+++YGGL +MFKS
Sbjct: 267 FSWRLVVHFILWASLWSCYVLLLCGISVRRYGGLGEMFKS 306


>ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein-like [Glycine max]
          Length = 468

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +2

Query: 17  VGRSFSWRPVIYFLLRAAIWSFYTLFVCNISLQQYGGLSKMFK 145
           V   FSWRPV+ FL  A +WS Y L +C I +QQYGGL ++FK
Sbjct: 252 VANVFSWRPVVLFLFWALLWSSYVLVLCGIYVQQYGGLQELFK 294


>ref|XP_003525538.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein-like [Glycine max]
          Length = 464

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = +2

Query: 17  VGRSFSWRPVIYFLLRAAIWSFYTLFVCNISLQQYGGLSKMFK 145
           V   FSWRPV++FL    +WS Y L +C I +QQYGGL ++FK
Sbjct: 248 VANVFSWRPVVFFLFWTLLWSSYVLVLCGICVQQYGGLHELFK 290


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