BLASTX nr result
ID: Coptis24_contig00009425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009425
(1735 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256... 452 e-124
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera] 439 e-121
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2... 438 e-120
ref|XP_002883706.1| integral membrane family protein [Arabidopsi... 417 e-114
gb|AAM63171.1| unknown [Arabidopsis thaliana] 410 e-112
>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
gi|297739206|emb|CBI28857.3| unnamed protein product
[Vitis vinifera]
Length = 390
Score = 452 bits (1164), Expect = e-124
Identities = 226/346 (65%), Positives = 277/346 (80%)
Frame = -3
Query: 1490 INIFSLPYTRRNPREEMKKVAETDVSLFYPFVLWMWSGSKYSGFLCVAVSASIYCIMHVL 1311
INIFS+ Y+RR PRE++ K AE D S F F+LW WSGS+ SG LC+A+S++IYCIM L
Sbjct: 48 INIFSVSYSRRKPREQVTKSAE-DAS-FTQFILWAWSGSRCSGLLCMALSSTIYCIMEAL 105
Query: 1310 SETFSAQSIPSFESVFTRCTIILILSFIWLKRVGQPIFGPTHARSLLFLRALMGFLSMFS 1131
S+ FSAQSIP FE+ FTRCT+ LILS+ WL+R GQPIFGPTH RSLL RALMG+LS+ S
Sbjct: 106 SDIFSAQSIPLFETAFTRCTVTLILSYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLS 165
Query: 1130 FIYSVRSLPLSQAIVLNFTTPIMASIAARILLQEKLKLTDVGGLACSFFGLLFIFRPMLI 951
F+Y ++ LPLSQA+VL+FTTPIMASI ARI+L EKL + ++GGLACSF G+LFIFRP+L
Sbjct: 166 FVYCIQRLPLSQAVVLSFTTPIMASIMARIILHEKLNIAEIGGLACSFIGVLFIFRPILA 225
Query: 950 TQGRSTEIGDASVKYVARINHPVFSVCVGLFSSITGGISDCLIRSAAKASDQPVTTVFSF 771
QG + +A+ YV +H +++V VGL SSI+GGIS CL R+ AKASDQPV TVF+F
Sbjct: 226 AQGGLPKAEEANNIYVGGSDH-IYAVLVGLVSSISGGISYCLTRAGAKASDQPVITVFAF 284
Query: 770 SVLACPAAAICTYAFQDFVLPNFYSFFLMIVLGVLSFFAEVFLARGLQLEKTSRVANIQY 591
+L PAAAICT+AFQDFVLP+FYSFFLM++L VL+FFAEVFLARGLQLEKTS+ NIQY
Sbjct: 285 GMLGSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSKATNIQY 344
Query: 590 IEVALLQVWSISIARAAPSFGRLAGCLLIFVSVSGTMYFGREKEVE 453
IE AL Q+W + ++ APSFGRL GC LIF S TMYFG +KE+E
Sbjct: 345 IEAALSQLWGLGSSKIAPSFGRLVGCFLIFASTCCTMYFGPDKEME 390
>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
Length = 413
Score = 439 bits (1130), Expect = e-121
Identities = 226/369 (61%), Positives = 277/369 (75%), Gaps = 23/369 (6%)
Frame = -3
Query: 1490 INIFSLPYTRRNPREEMKKVAETDVSLFYPFVLWMWSGSKYSGFLCVAVSASIYCIMHVL 1311
INIFS+ Y+RR PRE++ K AE D S F F+LW WSGS+ SG LC+A+S++IYCIM L
Sbjct: 48 INIFSVSYSRRKPREQVTKSAE-DAS-FTQFILWAWSGSRCSGLLCMALSSTIYCIMEAL 105
Query: 1310 SETFSAQSIPSFESVFTRCTIILILSFIWLKRVGQPIFGPTHARSLLFLRALMGFLSMFS 1131
S+ FSAQSIP FE+ FTRCT+ LILS+ WL+R GQPIFGPTH RSLL RALMG+LS+ S
Sbjct: 106 SDIFSAQSIPLFETAFTRCTVTLILSYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLS 165
Query: 1130 FIYSVRSLPLSQAIVLNFTTPIMASIAARILLQEKLKLTDVG------------------ 1005
F+Y ++ LPLSQA+VL+FTTPIMASI ARI+L EKL + ++G
Sbjct: 166 FVYCIQRLPLSQAVVLSFTTPIMASIMARIILHEKLNIAEIGELYTYFCEAGGETDCFVB 225
Query: 1004 -----GLACSFFGLLFIFRPMLITQGRSTEIGDASVKYVARINHPVFSVCVGLFSSITGG 840
GLACSF G+LFIFRP+L QG + +A+ YV +H +++V VGL SSI+GG
Sbjct: 226 CIYFPGLACSFIGVLFIFRPILAAQGGLPKAEEANNIYVGGSDH-IYAVLVGLVSSISGG 284
Query: 839 ISDCLIRSAAKASDQPVTTVFSFSVLACPAAAICTYAFQDFVLPNFYSFFLMIVLGVLSF 660
IS CL R+ AKASDQPV TVF+F +L PAAAICT+AFQDFVLP+FYSFFLM++L VL+F
Sbjct: 285 ISYCLTRAGAKASDQPVITVFAFGMLGSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAF 344
Query: 659 FAEVFLARGLQLEKTSRVANIQYIEVALLQVWSISIARAAPSFGRLAGCLLIFVSVSGTM 480
FAEVFLARGLQLEKTS+ NIQYIE AL Q+W + ++ APSFGRL GC LIF S TM
Sbjct: 345 FAEVFLARGLQLEKTSKATNIQYIEAALSQLWGLGSSKIAPSFGRLVGCFLIFASTCCTM 404
Query: 479 YFGREKEVE 453
YFG +KE+E
Sbjct: 405 YFGPDKEME 413
>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 438 bits (1127), Expect = e-120
Identities = 218/346 (63%), Positives = 268/346 (77%)
Frame = -3
Query: 1490 INIFSLPYTRRNPREEMKKVAETDVSLFYPFVLWMWSGSKYSGFLCVAVSASIYCIMHVL 1311
INIFS+ ++RR PRE+ K+ + + FVLW+W GS+YSG LCVA+S++IY +M VL
Sbjct: 49 INIFSVSHSRRKPREQGTKIPDIETFPVTQFVLWIWGGSRYSGLLCVAISSTIYFVMEVL 108
Query: 1310 SETFSAQSIPSFESVFTRCTIILILSFIWLKRVGQPIFGPTHARSLLFLRALMGFLSMFS 1131
S+ FSAQSIP FE+ F RCTI LILS++WL+ GQPIFGP HAR LF RAL G LS+ S
Sbjct: 109 SDFFSAQSIPLFETAFARCTITLILSYLWLRGNGQPIFGPAHARKFLFSRALTGCLSLLS 168
Query: 1130 FIYSVRSLPLSQAIVLNFTTPIMASIAARILLQEKLKLTDVGGLACSFFGLLFIFRPMLI 951
FIY +R LPLSQAIVL+FTTPIMASI ARI+L EKLK+ DVGGLACSFFG+LFIFR +L
Sbjct: 169 FIYCIRRLPLSQAIVLSFTTPIMASIVARIILHEKLKIVDVGGLACSFFGVLFIFRQILT 228
Query: 950 TQGRSTEIGDASVKYVARINHPVFSVCVGLFSSITGGISDCLIRSAAKASDQPVTTVFSF 771
TQG +G+ + + NH V +V V LFSSITGGIS CL+++ AKASDQP+ TVFSF
Sbjct: 229 TQGALLRVGETNYIAIMGRNH-VLTVLVALFSSITGGISYCLVKAGAKASDQPLATVFSF 287
Query: 770 SVLACPAAAICTYAFQDFVLPNFYSFFLMIVLGVLSFFAEVFLARGLQLEKTSRVANIQY 591
+LA PA +C +AF++FVLPNFY+FFLM++LG+LSF AEVF ARGLQLEKTS+ AN+ Y
Sbjct: 288 GILATPATGMCAFAFEEFVLPNFYTFFLMLILGLLSFSAEVFFARGLQLEKTSKAANVLY 347
Query: 590 IEVALLQVWSISIARAAPSFGRLAGCLLIFVSVSGTMYFGREKEVE 453
+EVAL Q+W I R PSFG L GCLLI +SV T+Y G EKE+E
Sbjct: 348 MEVALSQLWGIGSWRITPSFGGLVGCLLILISVCCTIYIGPEKEME 393
>ref|XP_002883706.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329546|gb|EFH59965.1| integral membrane family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 417 bits (1072), Expect = e-114
Identities = 209/348 (60%), Positives = 265/348 (76%), Gaps = 2/348 (0%)
Frame = -3
Query: 1490 INIFSLPYTRRNPREEMKKVAETDVSLFYPFVLWMWSGSKYSGFLCVAVSASIYCIMHVL 1311
INIFS YTR PRE++ KV ET++S F W+WSGS+YSG LC+ +S+++Y IM ++
Sbjct: 55 INIFSASYTRHKPREQVIKVTETEISPVTQFSSWIWSGSRYSGLLCMVLSSTLYLIMELV 114
Query: 1310 SETFSAQSIPSFESVFTRCTIILILSFIWLKRVGQPIFGPTHARSLLFLRALMGFLSMFS 1131
S+TFS Q IP FE+ F RCTIILILS++WLKR+GQPIFGP HAR LL RAL+G+LS+FS
Sbjct: 115 SDTFSVQPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFS 174
Query: 1130 FIYSVRSLPLSQAIVLNFTTPIMASIAARILLQEKLKLTDVGGLACSFFGLLFIFRPMLI 951
FI+S++ LPLSQAIVL+F PIMASIAAR+++ EKLK+TD+GGLACSFFG+LFIF P L
Sbjct: 175 FIFSIQMLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLT 234
Query: 950 TQGRSTEIGDASVKYVARINHPVFSVCVGLFSSITGGISDCLIRSAAKASDQPVTTVFSF 771
Q +G + NH +++ +GLFSSITGGI+ CLI++AAKAS+QPV TVFSF
Sbjct: 235 VQ-----VGSEGTNENLKGNHHIYAFWLGLFSSITGGITYCLIKAAAKASEQPVITVFSF 289
Query: 770 SVLACPAAAICTYAFQDFVLPNFYSFFLMIVLGVLSFFAEVFLARGLQLEKTSRVANIQY 591
++ACPAAAIC ++F+ FVLP F + MIVLG+L+F AEV LARGLQLEK S+ ANI Y
Sbjct: 290 GLVACPAAAICMFSFESFVLPAFDTLITMIVLGLLAFCAEVLLARGLQLEKISKAANILY 349
Query: 590 IEVALLQVWSISIARAAPS--FGRLAGCLLIFVSVSGTMYFGREKEVE 453
IEV L Q+W +S +A F RL GCLLI +SVS T+Y G K+ E
Sbjct: 350 IEVVLSQLWIVSTGKAGSPGLFSRLVGCLLILISVSYTVYMGPAKDTE 397
>gb|AAM63171.1| unknown [Arabidopsis thaliana]
Length = 401
Score = 410 bits (1055), Expect = e-112
Identities = 206/348 (59%), Positives = 263/348 (75%), Gaps = 2/348 (0%)
Frame = -3
Query: 1490 INIFSLPYTRRNPREEMKKVAETDVSLFYPFVLWMWSGSKYSGFLCVAVSASIYCIMHVL 1311
INIFS YTRR PRE++ KV ET++S F W+WSGS+YSG LC+A+S+++Y IM ++
Sbjct: 55 INIFSASYTRRKPREQVIKVTETEISPLTQFSSWIWSGSRYSGLLCMALSSTLYLIMELV 114
Query: 1310 SETFSAQSIPSFESVFTRCTIILILSFIWLKRVGQPIFGPTHARSLLFLRALMGFLSMFS 1131
S+TFS Q IP FE+ F RCTIILILS++WLKR+GQPIFGP HAR LL RAL+G+LS+FS
Sbjct: 115 SDTFSVQPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFS 174
Query: 1130 FIYSVRSLPLSQAIVLNFTTPIMASIAARILLQEKLKLTDVGGLACSFFGLLFIFRPMLI 951
FI+S++ LPLSQAIVL+F PIMASIAAR+++ EKLK+TD+GGLACSFFG+LFIF P L
Sbjct: 175 FIFSIQMLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLT 234
Query: 950 TQGRSTEIGDASVKYVARINHPVFSVCVGLFSSITGGISDCLIRSAAKASDQPVTTVFSF 771
Q +G + NH +++ +GLFSSITGGI+ CLI++AAKAS+QPV TV SF
Sbjct: 235 VQ-----VGLEGKNENLKENHHIYAFLLGLFSSITGGITYCLIKAAAKASEQPVITVLSF 289
Query: 770 SVLACPAAAICTYAFQDFVLPNFYSFFLMIVLGVLSFFAEVFLARGLQLEKTSRVANIQY 591
++ACPA AIC ++F+ FVLP F + MIVLG+L+F AEV LARGLQLEK S+ AN+ Y
Sbjct: 290 GLVACPATAICMFSFESFVLPAFDTLVSMIVLGLLAFCAEVLLARGLQLEKISKAANVLY 349
Query: 590 IEVALLQVWSISIARAAPS--FGRLAGCLLIFVSVSGTMYFGREKEVE 453
IEV L Q+W +S + F RL GCLLI +SV T+Y G K+ E
Sbjct: 350 IEVVLSQLWLVSTGKTGSPGLFSRLVGCLLILLSVGYTVYIGPAKDTE 397