BLASTX nr result

ID: Coptis24_contig00009353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009353
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526388.1| conserved hypothetical protein [Ricinus comm...   333   4e-89
ref|XP_002263097.1| PREDICTED: transmembrane protein 56-like [Vi...   332   7e-89
emb|CBI15782.3| unnamed protein product [Vitis vinifera]              332   7e-89
ref|XP_003553160.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...   325   2e-86
ref|NP_001242160.1| uncharacterized protein LOC100780614 [Glycin...   319   6e-85

>ref|XP_002526388.1| conserved hypothetical protein [Ricinus communis]
           gi|223534250|gb|EEF35964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  333 bits (854), Expect = 4e-89
 Identities = 160/252 (63%), Positives = 194/252 (76%)
 Frame = +1

Query: 115 VMESFTGQSVWCVLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAI 294
           +M++     +  +  GI MCI+VY+LT + S L  N Y KLT+ +K+EWNNRG ST HAI
Sbjct: 13  IMDTVNPMWLASIFSGIIMCIIVYKLTGVLSLLCFNGYGKLTKAQKIEWNNRGFSTFHAI 72

Query: 295 AVAVGSFYFLVLSDLFGEGSHNQSILERLSPQSDTLFGISIGYFVSDLGMILWYFPELGG 474
            VA  SFY L+LS LF E SH++ I+ R S  S+++ G+SIGYF++DL MILWYFP LGG
Sbjct: 73  VVASASFYLLMLSGLFDEDSHDELIINRSSDISNSVLGVSIGYFLADLAMILWYFPALGG 132

Query: 475 LEYVLHHAXXXXXXXXXXXXGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICN 654
           LEYVLHH             GQ Q YIL++LFSESTTPFVNLRWYLDVA QKSSKLY+ N
Sbjct: 133 LEYVLHHGLSMYSIILALLSGQAQIYILMILFSESTTPFVNLRWYLDVAGQKSSKLYVSN 192

Query: 655 GVALFLGWLVARIILFIYFFIHMYLHFDEVKKIFPLGFYSLLTVAPILAVMNVFWFWKIA 834
           GV LFLGWLVARIILFI FF HM++HFD+VKK+FPLGFYSLL+V P+L VMNV WFWKIA
Sbjct: 193 GVLLFLGWLVARIILFICFFTHMFIHFDQVKKVFPLGFYSLLSVPPVLGVMNVVWFWKIA 252

Query: 835 RGMMKTLSKAKH 870
           RG++KTLS+AK+
Sbjct: 253 RGLIKTLSRAKN 264


>ref|XP_002263097.1| PREDICTED: transmembrane protein 56-like [Vitis vinifera]
          Length = 267

 Score =  332 bits (852), Expect = 7e-89
 Identities = 162/242 (66%), Positives = 185/242 (76%)
 Frame = +1

Query: 151 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 330
           V  G+  C +VY LT L S L    Y KL+  EK+EWNNRG ST HAI VAV S Y L++
Sbjct: 26  VFFGMIFCKIVYELTGLLSNLCFKGYTKLSNTEKVEWNNRGFSTFHAIIVAVASLYLLLV 85

Query: 331 SDLFGEGSHNQSILERLSPQSDTLFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 510
           SDLF E S ++SI+ R S  SDT+ GISIGYF+SDL MILW FP LGGLEYVLHH     
Sbjct: 86  SDLFDEDSRDESIINRASTLSDTILGISIGYFLSDLAMILWNFPALGGLEYVLHHGLSMF 145

Query: 511 XXXXXXXXGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 690
                   GQGQ YIL+VLFSESTTPFVNLRW+LDVA  KSS LYICNG+ALF GWLVAR
Sbjct: 146 SIFLSLISGQGQVYILMVLFSESTTPFVNLRWHLDVAGLKSSNLYICNGIALFFGWLVAR 205

Query: 691 IILFIYFFIHMYLHFDEVKKIFPLGFYSLLTVAPILAVMNVFWFWKIARGMMKTLSKAKH 870
           I+LFI+FF HM +HFDEVKKIFPLGFYSLL V P+LA+MN FWFWKIA+G++KTLSKA+H
Sbjct: 206 ILLFIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARH 265

Query: 871 VQ 876
            Q
Sbjct: 266 SQ 267


>emb|CBI15782.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  332 bits (852), Expect = 7e-89
 Identities = 162/242 (66%), Positives = 185/242 (76%)
 Frame = +1

Query: 151 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 330
           V  G+  C +VY LT L S L    Y KL+  EK+EWNNRG ST HAI VAV S Y L++
Sbjct: 16  VFFGMIFCKIVYELTGLLSNLCFKGYTKLSNTEKVEWNNRGFSTFHAIIVAVASLYLLLV 75

Query: 331 SDLFGEGSHNQSILERLSPQSDTLFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 510
           SDLF E S ++SI+ R S  SDT+ GISIGYF+SDL MILW FP LGGLEYVLHH     
Sbjct: 76  SDLFDEDSRDESIINRASTLSDTILGISIGYFLSDLAMILWNFPALGGLEYVLHHGLSMF 135

Query: 511 XXXXXXXXGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 690
                   GQGQ YIL+VLFSESTTPFVNLRW+LDVA  KSS LYICNG+ALF GWLVAR
Sbjct: 136 SIFLSLISGQGQVYILMVLFSESTTPFVNLRWHLDVAGLKSSNLYICNGIALFFGWLVAR 195

Query: 691 IILFIYFFIHMYLHFDEVKKIFPLGFYSLLTVAPILAVMNVFWFWKIARGMMKTLSKAKH 870
           I+LFI+FF HM +HFDEVKKIFPLGFYSLL V P+LA+MN FWFWKIA+G++KTLSKA+H
Sbjct: 196 ILLFIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARH 255

Query: 871 VQ 876
            Q
Sbjct: 256 SQ 257


>ref|XP_003553160.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 56-B-like
           [Glycine max]
          Length = 280

 Score =  325 bits (832), Expect = 2e-86
 Identities = 150/240 (62%), Positives = 186/240 (77%)
 Frame = +1

Query: 151 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 330
           V  GI  C++VYRLT + S L    Y KL+  EK+EWNNRG ST HA+  +  SFY LVL
Sbjct: 32  VFTGIIFCVVVYRLTAILSSLLFKGYGKLSSAEKIEWNNRGFSTFHALFASFTSFYLLVL 91

Query: 331 SDLFGEGSHNQSILERLSPQSDTLFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 510
           SD+F + SH + ++ R S  S+++ GISIGYF++DL MILW+FP LGGLEYVLHH     
Sbjct: 92  SDIFNKDSHEELVINRSSTFSNSVLGISIGYFLADLAMILWHFPALGGLEYVLHHGLSMF 151

Query: 511 XXXXXXXXGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 690
                   GQGQ YIL+VLFSESTTPFVNLRW+LD+A  KSSKLY+ NG+ALF GWL+AR
Sbjct: 152 SIIQSLLCGQGQIYILMVLFSESTTPFVNLRWHLDIADLKSSKLYVWNGIALFFGWLIAR 211

Query: 691 IILFIYFFIHMYLHFDEVKKIFPLGFYSLLTVAPILAVMNVFWFWKIARGMMKTLSKAKH 870
           I LF++FFIHM+ HFDEVK+I+PLGFYSLL V P+LA+MN+FWFWKIA+G++KT+SKAKH
Sbjct: 212 IFLFMFFFIHMWTHFDEVKEIYPLGFYSLLVVPPVLAMMNLFWFWKIAKGLVKTISKAKH 271


>ref|NP_001242160.1| uncharacterized protein LOC100780614 [Glycine max]
           gi|255640748|gb|ACU20658.1| unknown [Glycine max]
          Length = 280

 Score =  319 bits (818), Expect = 6e-85
 Identities = 150/240 (62%), Positives = 184/240 (76%)
 Frame = +1

Query: 151 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 330
           V  GI  C++VYRLT + S L    Y KL+  +K+EWNNRG ST HA+  +  SFY LVL
Sbjct: 32  VFTGIIFCVIVYRLTAILSSLLFKGYDKLSSAQKIEWNNRGFSTFHALFASFMSFYLLVL 91

Query: 331 SDLFGEGSHNQSILERLSPQSDTLFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 510
           SD+F + SH + I+ R S  S+ + GISIGYF++DL MILW+FP LGGLEYVLHH     
Sbjct: 92  SDIFNKDSHEELIINRSSTFSNLVLGISIGYFLADLAMILWHFPALGGLEYVLHHGLSMF 151

Query: 511 XXXXXXXXGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 690
                   GQG  YIL+VLFSESTTPFVNLRW+LD+A  KSSKLY+ NG+ALF GWL+AR
Sbjct: 152 SIIQSLLSGQGLIYILMVLFSESTTPFVNLRWHLDIAGLKSSKLYVWNGIALFFGWLIAR 211

Query: 691 IILFIYFFIHMYLHFDEVKKIFPLGFYSLLTVAPILAVMNVFWFWKIARGMMKTLSKAKH 870
           I LF++FFIHM+ HFDEVK+IFPLGFYSLL V P+LA+MN+FWFWKIA+G++KT+SKAKH
Sbjct: 212 IFLFMFFFIHMWTHFDEVKEIFPLGFYSLLVVPPMLAMMNLFWFWKIAKGLVKTISKAKH 271


Top