BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009196
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II tra...   134   1e-29
ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II tra...   134   1e-29
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   133   1e-29
ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793...   130   1e-28
ref|NP_001190676.1| sensitive to freezing 6 protein [Arabidopsis...   127   7e-28

>ref|XP_004170159.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1143

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/81 (74%), Positives = 68/81 (83%)
 Frame = +1

Query: 7   FAPVGNYHGNVVSAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRVLPPALPNSEFKANS 186
           FAPV NY  NV  AIAAP FSS+ CC ASVWHD +KDCT L+I RVLPPA P+++ KANS
Sbjct: 474 FAPVENYQINVGPAIAAPAFSSTSCCSASVWHDVNKDCTMLRIIRVLPPAAPSNQLKANS 533

Query: 187 ATWERAIADRFWWSLLVGVDW 249
           +TWERAIA+RFWWSLLVGVDW
Sbjct: 534 STWERAIAERFWWSLLVGVDW 554


>ref|XP_004146647.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           16-like [Cucumis sativus]
          Length = 1220

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/81 (74%), Positives = 68/81 (83%)
 Frame = +1

Query: 7   FAPVGNYHGNVVSAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRVLPPALPNSEFKANS 186
           FAPV NY  NV  AIAAP FSS+ CC ASVWHD +KDCT L+I RVLPPA P+++ KANS
Sbjct: 551 FAPVENYQINVGPAIAAPAFSSTSCCSASVWHDVNKDCTMLRIIRVLPPAAPSNQLKANS 610

Query: 187 ATWERAIADRFWWSLLVGVDW 249
           +TWERAIA+RFWWSLLVGVDW
Sbjct: 611 STWERAIAERFWWSLLVGVDW 631


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/81 (76%), Positives = 69/81 (85%)
 Frame = +1

Query: 7   FAPVGNYHGNVVSAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRVLPPALPNSEFKANS 186
           F PV +Y  NV SAIAAP FSS+ CC ASVWHDTSKD T LKI RVLPPA+P+S+ KANS
Sbjct: 589 FTPVDSYQINVGSAIAAPAFSSTSCCSASVWHDTSKDRTILKIIRVLPPAVPSSQVKANS 648

Query: 187 ATWERAIADRFWWSLLVGVDW 249
           +TWERAIA+RFWWSLLVGVDW
Sbjct: 649 STWERAIAERFWWSLLVGVDW 669


>ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max]
          Length = 1244

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/81 (72%), Positives = 68/81 (83%)
 Frame = +1

Query: 7   FAPVGNYHGNVVSAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRVLPPALPNSEFKANS 186
           F PV NY  NV SAIAAP FSS+ CC ASVWHD+SK+CT L+I RVLPP++P S+ KANS
Sbjct: 589 FTPVDNYQINVGSAIAAPAFSSTSCCSASVWHDSSKNCTILRIIRVLPPSIPISQAKANS 648

Query: 187 ATWERAIADRFWWSLLVGVDW 249
           +TWERAIA+RFWWSLLV VDW
Sbjct: 649 STWERAIAERFWWSLLVSVDW 669


>ref|NP_001190676.1| sensitive to freezing 6 protein [Arabidopsis thaliana]
           gi|332657042|gb|AEE82442.1| sensitive to freezing 6
           protein [Arabidopsis thaliana]
          Length = 1267

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = +1

Query: 7   FAPVGNYHGNVVSAIAAPTFSSSGCCLASVWHDTSKDCTSLKITRVLPPALPNSEFKANS 186
           F+PV NY  NV SAIAAP FS + CC ASVWHD +KDC  LKI RVLPPALP ++ K + 
Sbjct: 604 FSPVENYQINVGSAIAAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQ 663

Query: 187 ATWERAIADRFWWSLLVGVDW 249
           +TWERAIA+RFWWSLLVGVDW
Sbjct: 664 STWERAIAERFWWSLLVGVDW 684