BLASTX nr result
ID: Coptis24_contig00009020
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009020 (796 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis ... 145 1e-32 ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycin... 139 9e-31 ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [G... 138 2e-30 gb|ACU24275.1| unknown [Glycine max] 138 2e-30 ref|XP_003536038.1| PREDICTED: AP-3 complex subunit mu-1-like [G... 135 8e-30 >ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis vinifera] gi|296089804|emb|CBI39623.3| unnamed protein product [Vitis vinifera] Length = 415 Score = 145 bits (366), Expect = 1e-32 Identities = 69/81 (85%), Positives = 75/81 (92%) Frame = +3 Query: 3 TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 182 TC+WSIGRIPKDKAPS+SGTL LE G+ERLHVFPTFQV F+IMGVALSGLQID LD+KN Sbjct: 335 TCSWSIGRIPKDKAPSLSGTLTLETGMERLHVFPTFQVGFRIMGVALSGLQIDTLDIKNL 394 Query: 183 PSPPYKGFRALTQAGKYEVRS 245 PS PYKGFRALTQAG+YEVRS Sbjct: 395 PSRPYKGFRALTQAGQYEVRS 415 >ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycine max] gi|255641304|gb|ACU20929.1| unknown [Glycine max] Length = 415 Score = 139 bits (349), Expect = 9e-31 Identities = 68/81 (83%), Positives = 74/81 (91%) Frame = +3 Query: 3 TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 182 TC+WSIGRIPKDKAPSMSGTLVLE GL+RLHVFPTFQV F+IMGVALSGLQIDKLDLK Sbjct: 335 TCSWSIGRIPKDKAPSMSGTLVLETGLDRLHVFPTFQVGFRIMGVALSGLQIDKLDLKTV 394 Query: 183 PSPPYKGFRALTQAGKYEVRS 245 P YKGFRALT+AG++EVRS Sbjct: 395 PYRFYKGFRALTRAGEFEVRS 415 >ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max] Length = 415 Score = 138 bits (347), Expect = 2e-30 Identities = 68/80 (85%), Positives = 73/80 (91%) Frame = +3 Query: 6 CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 185 C+WSIGRIPKDKAPSMSGTLVLE GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK P Sbjct: 336 CSWSIGRIPKDKAPSMSGTLVLETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVP 395 Query: 186 SPPYKGFRALTQAGKYEVRS 245 YKGFRALT+AG++EVRS Sbjct: 396 YRFYKGFRALTRAGEFEVRS 415 >gb|ACU24275.1| unknown [Glycine max] Length = 341 Score = 138 bits (347), Expect = 2e-30 Identities = 68/80 (85%), Positives = 73/80 (91%) Frame = +3 Query: 6 CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 185 C+WSIGRIPKDKAPSMSGTLVLE GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK P Sbjct: 262 CSWSIGRIPKDKAPSMSGTLVLETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVP 321 Query: 186 SPPYKGFRALTQAGKYEVRS 245 YKGFRALT+AG++EVRS Sbjct: 322 YRFYKGFRALTRAGEFEVRS 341 >ref|XP_003536038.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max] Length = 415 Score = 135 bits (341), Expect = 8e-30 Identities = 66/81 (81%), Positives = 72/81 (88%) Frame = +3 Query: 3 TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 182 TC WSIGRIPKDK PS+SGTLV+E GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK Sbjct: 335 TCIWSIGRIPKDKTPSLSGTLVIETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTV 394 Query: 183 PSPPYKGFRALTQAGKYEVRS 245 P YKGFRALT+AG++EVRS Sbjct: 395 PYRFYKGFRALTRAGEFEVRS 415