BLASTX nr result

ID: Coptis24_contig00009020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009020
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis ...   145   1e-32
ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycin...   139   9e-31
ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [G...   138   2e-30
gb|ACU24275.1| unknown [Glycine max]                                  138   2e-30
ref|XP_003536038.1| PREDICTED: AP-3 complex subunit mu-1-like [G...   135   8e-30

>ref|XP_002281428.1| PREDICTED: AP-3 complex subunit mu-1 [Vitis vinifera]
           gi|296089804|emb|CBI39623.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  145 bits (366), Expect = 1e-32
 Identities = 69/81 (85%), Positives = 75/81 (92%)
 Frame = +3

Query: 3   TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 182
           TC+WSIGRIPKDKAPS+SGTL LE G+ERLHVFPTFQV F+IMGVALSGLQID LD+KN 
Sbjct: 335 TCSWSIGRIPKDKAPSLSGTLTLETGMERLHVFPTFQVGFRIMGVALSGLQIDTLDIKNL 394

Query: 183 PSPPYKGFRALTQAGKYEVRS 245
           PS PYKGFRALTQAG+YEVRS
Sbjct: 395 PSRPYKGFRALTQAGQYEVRS 415


>ref|NP_001242747.1| uncharacterized protein LOC100799191 [Glycine max]
           gi|255641304|gb|ACU20929.1| unknown [Glycine max]
          Length = 415

 Score =  139 bits (349), Expect = 9e-31
 Identities = 68/81 (83%), Positives = 74/81 (91%)
 Frame = +3

Query: 3   TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 182
           TC+WSIGRIPKDKAPSMSGTLVLE GL+RLHVFPTFQV F+IMGVALSGLQIDKLDLK  
Sbjct: 335 TCSWSIGRIPKDKAPSMSGTLVLETGLDRLHVFPTFQVGFRIMGVALSGLQIDKLDLKTV 394

Query: 183 PSPPYKGFRALTQAGKYEVRS 245
           P   YKGFRALT+AG++EVRS
Sbjct: 395 PYRFYKGFRALTRAGEFEVRS 415


>ref|XP_003521657.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max]
          Length = 415

 Score =  138 bits (347), Expect = 2e-30
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = +3

Query: 6   CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 185
           C+WSIGRIPKDKAPSMSGTLVLE GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK  P
Sbjct: 336 CSWSIGRIPKDKAPSMSGTLVLETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVP 395

Query: 186 SPPYKGFRALTQAGKYEVRS 245
              YKGFRALT+AG++EVRS
Sbjct: 396 YRFYKGFRALTRAGEFEVRS 415


>gb|ACU24275.1| unknown [Glycine max]
          Length = 341

 Score =  138 bits (347), Expect = 2e-30
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = +3

Query: 6   CTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNSP 185
           C+WSIGRIPKDKAPSMSGTLVLE GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK  P
Sbjct: 262 CSWSIGRIPKDKAPSMSGTLVLETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTVP 321

Query: 186 SPPYKGFRALTQAGKYEVRS 245
              YKGFRALT+AG++EVRS
Sbjct: 322 YRFYKGFRALTRAGEFEVRS 341


>ref|XP_003536038.1| PREDICTED: AP-3 complex subunit mu-1-like [Glycine max]
          Length = 415

 Score =  135 bits (341), Expect = 8e-30
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = +3

Query: 3   TCTWSIGRIPKDKAPSMSGTLVLEKGLERLHVFPTFQVAFKIMGVALSGLQIDKLDLKNS 182
           TC WSIGRIPKDK PS+SGTLV+E GLERLHVFPTFQV F+IMGVALSGLQIDKLDLK  
Sbjct: 335 TCIWSIGRIPKDKTPSLSGTLVIETGLERLHVFPTFQVGFRIMGVALSGLQIDKLDLKTV 394

Query: 183 PSPPYKGFRALTQAGKYEVRS 245
           P   YKGFRALT+AG++EVRS
Sbjct: 395 PYRFYKGFRALTRAGEFEVRS 415


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