BLASTX nr result
ID: Coptis24_contig00008997
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008997 (1058 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methy... 307 e-109 ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransf... 297 e-105 ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267... 290 e-103 emb|CBI32146.3| unnamed protein product [Vitis vinifera] 290 e-103 ref|XP_002886632.1| radical SAM domain-containing protein [Arabi... 298 e-103 >ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like [Glycine max] Length = 445 Score = 307 bits (787), Expect(3) = e-109 Identities = 151/170 (88%), Positives = 165/170 (97%) Frame = +1 Query: 544 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 723 +ILFTL+DGLVIETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGL+RHLTAAEI+EQ Sbjct: 160 KILFTLEDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLRRHLTAAEIVEQ 219 Query: 724 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 903 VF RR+L+ EVGSI+NVVFMGMGEPLHNID+VIKAA+IMVDEQGLQFSPRKVTISTSGL Sbjct: 220 AVFARRLLTDEVGSITNVVFMGMGEPLHNIDNVIKAADIMVDEQGLQFSPRKVTISTSGL 279 Query: 904 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREEL 1053 VPQLKRFL+ESNC+LAVSLNATT+EVRNWIMPINRKYKLE+LL TLREEL Sbjct: 280 VPQLKRFLHESNCALAVSLNATTDEVRNWIMPINRKYKLELLLQTLREEL 329 Score = 110 bits (275), Expect(3) = e-109 Identities = 49/70 (70%), Positives = 62/70 (88%) Frame = +3 Query: 333 QKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDLAEFKALSLKDIL 512 +KWVQS G+RPGQAMMLWK++YG+ IWAH DELEGLNKDF+K L++ AEFKAL+ K+I Sbjct: 93 EKWVQSHGYRPGQAMMLWKRMYGNNIWAHHIDELEGLNKDFKKMLNENAEFKALTQKEIR 152 Query: 513 TAADGTRKVV 542 TA+DGTRK++ Sbjct: 153 TASDGTRKIL 162 Score = 25.8 bits (55), Expect(3) = e-109 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 221 KVLLKGMTYTELE 259 K+LLKGMTY ELE Sbjct: 81 KMLLKGMTYPELE 93 >ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransferase RlmN-like [Cucumis sativus] Length = 482 Score = 297 bits (760), Expect(3) = e-105 Identities = 145/170 (85%), Positives = 158/170 (92%) Frame = +1 Query: 544 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 723 +ILF L+DGL+IETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEI+EQ Sbjct: 197 KILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQ 256 Query: 724 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 903 VF RR+L+ EVG I+NVVFMGMGEPLHNID+VIKA NIMV EQGL FSPRKVT+STSGL Sbjct: 257 AVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGL 316 Query: 904 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREEL 1053 VPQLKRFLNE NC+LAVSLNATT+EVRNWIMPINRKYKL +LL TLREEL Sbjct: 317 VPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREEL 366 Score = 108 bits (269), Expect(3) = e-105 Identities = 47/70 (67%), Positives = 61/70 (87%) Frame = +3 Query: 333 QKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDLAEFKALSLKDIL 512 +KWVQ+ G+RPGQA+MLWK+LYG IWAH+ DELEGLNKDF+K L + AEF+ALSL++IL Sbjct: 130 EKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIENAEFRALSLREIL 189 Query: 513 TAADGTRKVV 542 + DGTRK++ Sbjct: 190 PSCDGTRKIL 199 Score = 25.8 bits (55), Expect(3) = e-105 Identities = 10/14 (71%), Positives = 14/14 (100%) Frame = +2 Query: 218 NKVLLKGMTYTELE 259 +K+LLKG++YTELE Sbjct: 117 SKMLLKGLSYTELE 130 >ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267261 [Vitis vinifera] Length = 907 Score = 290 bits (741), Expect(3) = e-103 Identities = 140/170 (82%), Positives = 155/170 (91%) Frame = +1 Query: 544 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 723 +ILFTLDDGLVIETV+IPC +GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEI+EQ Sbjct: 157 KILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQ 216 Query: 724 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 903 V+ RR+ S EVGSI+NVVFMGMGEP HNI+SVIKAA+IMV +QGL FSPRKVT+STSGL Sbjct: 217 AVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMVHDQGLHFSPRKVTVSTSGL 276 Query: 904 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREEL 1053 VPQLK FL ESNC+LAVSLNATT+EVRNW+MPINRKY L +LL TLREEL Sbjct: 277 VPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQTLREEL 326 Score = 110 bits (275), Expect(3) = e-103 Identities = 52/76 (68%), Positives = 64/76 (84%), Gaps = 1/76 (1%) Frame = +3 Query: 318 MFWFE-QKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDLAEFKAL 494 M +FE Q WVQS G+RPGQA+MLWK+LYG+ IWAH DELEGLNKDF+ LS+ AEFKAL Sbjct: 84 MRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSEHAEFKAL 143 Query: 495 SLKDILTAADGTRKVV 542 +LKD + A+DGTRK++ Sbjct: 144 TLKDSIKASDGTRKIL 159 Score = 23.5 bits (49), Expect(3) = e-103 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2 Query: 218 NKVLLKGMTYTELE 259 +KVLLKGM Y EL+ Sbjct: 77 SKVLLKGMRYFELQ 90 >emb|CBI32146.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 290 bits (741), Expect(3) = e-103 Identities = 140/170 (82%), Positives = 155/170 (91%) Frame = +1 Query: 544 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 723 +ILFTLDDGLVIETV+IPC +GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEI+EQ Sbjct: 157 KILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQ 216 Query: 724 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 903 V+ RR+ S EVGSI+NVVFMGMGEP HNI+SVIKAA+IMV +QGL FSPRKVT+STSGL Sbjct: 217 AVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMVHDQGLHFSPRKVTVSTSGL 276 Query: 904 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREEL 1053 VPQLK FL ESNC+LAVSLNATT+EVRNW+MPINRKY L +LL TLREEL Sbjct: 277 VPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQTLREEL 326 Score = 110 bits (275), Expect(3) = e-103 Identities = 52/76 (68%), Positives = 64/76 (84%), Gaps = 1/76 (1%) Frame = +3 Query: 318 MFWFE-QKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDLAEFKAL 494 M +FE Q WVQS G+RPGQA+MLWK+LYG+ IWAH DELEGLNKDF+ LS+ AEFKAL Sbjct: 84 MRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSEHAEFKAL 143 Query: 495 SLKDILTAADGTRKVV 542 +LKD + A+DGTRK++ Sbjct: 144 TLKDSIKASDGTRKIL 159 Score = 23.5 bits (49), Expect(3) = e-103 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2 Query: 218 NKVLLKGMTYTELE 259 +KVLLKGM Y EL+ Sbjct: 77 SKVLLKGMRYFELQ 90 >ref|XP_002886632.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297332473|gb|EFH62891.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 458 Score = 298 bits (763), Expect(3) = e-103 Identities = 147/171 (85%), Positives = 159/171 (92%) Frame = +1 Query: 544 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 723 +ILFTLDDGLVIETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEI+EQ Sbjct: 173 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQ 232 Query: 724 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 903 V+ RR+LS EVGSI+NVVFMGMGEP HNID+VIKAANIMVDE GL FSPRKVT+STSGL Sbjct: 233 AVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGL 292 Query: 904 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELS 1056 VPQLKRFL ESNC+LAVSLNATT+EVRNWIMPINRKYKL +LL TLRE LS Sbjct: 293 VPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREGLS 343 Score = 101 bits (251), Expect(3) = e-103 Identities = 46/70 (65%), Positives = 59/70 (84%) Frame = +3 Query: 333 QKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDLAEFKALSLKDIL 512 Q+WVQS GFRPGQA+MLWK+LY IWA++ DELEGLNKD ++ +S+ AEF ALS KDI Sbjct: 106 QEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIR 165 Query: 513 TAADGTRKVV 542 +A+DGTRK++ Sbjct: 166 SASDGTRKIL 175 Score = 23.5 bits (49), Expect(3) = e-103 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +2 Query: 212 NKNKVLLKGMTYTELE 259 + KV+LKGMTY L+ Sbjct: 91 DNQKVILKGMTYAALQ 106