BLASTX nr result

ID: Coptis24_contig00008995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008995
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263968.1| PREDICTED: transmembrane protein 18 [Vitis v...   165   4e-58
ref|NP_001237116.1| uncharacterized protein LOC100527513 [Glycin...   161   2e-54
ref|XP_003518332.1| PREDICTED: transmembrane protein 18-like [Gl...   157   1e-53
ref|XP_002526846.1| conserved hypothetical protein [Ricinus comm...   166   2e-53
ref|XP_002327230.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-53

>ref|XP_002263968.1| PREDICTED: transmembrane protein 18 [Vitis vinifera]
           gi|297739539|emb|CBI29721.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  165 bits (418), Expect(2) = 4e-58
 Identities = 74/104 (71%), Positives = 93/104 (89%)
 Frame = -3

Query: 750 EPWLIGLISFHVSLLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQN 571
           EPWLIGL+SFH +LLL+ F+SRK++NFQM LFL++L+GVY AE IN  L +NWK FAGQN
Sbjct: 48  EPWLIGLLSFHFALLLVTFLSRKHINFQMCLFLLALSGVYLAETINKFLGSNWKKFAGQN 107

Query: 570 YFDPHGVFVSVLWSGPLLCISILILMNTLFSLCQLIVKWKKAEL 439
           YFDP G+F+SVLWSGPLL I+I+IL+NTLFSLC+L++KWK+AEL
Sbjct: 108 YFDPRGLFLSVLWSGPLLLIAIIILLNTLFSLCRLLIKWKRAEL 151



 Score = 86.7 bits (213), Expect(2) = 4e-58
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -1

Query: 950 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAIDWK 810
           ME+LK  MNEHMD M+DLV+KFTAELR+GFQPA DNF+GFFHAIDWK
Sbjct: 1   MEDLKMAMNEHMDLMADLVQKFTAELRTGFQPAYDNFIGFFHAIDWK 47


>ref|NP_001237116.1| uncharacterized protein LOC100527513 [Glycine max]
           gi|255632518|gb|ACU16609.1| unknown [Glycine max]
          Length = 163

 Score =  161 bits (407), Expect(2) = 2e-54
 Identities = 81/146 (55%), Positives = 97/146 (66%)
 Frame = -3

Query: 750 EPWLIGLISFHVSLLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQN 571
           EPWL+GL+ FHV LLL+  ISRK  NFQM LFL++L GVYFAE +N  L  NWKSF+ QN
Sbjct: 48  EPWLMGLLGFHVVLLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQN 107

Query: 570 YFDPHGVFVSVLWSGPLLCISILILMNTLFSLCQLIVKWKKAELXXXXXXXXXXXXXXXX 391
           YFDP G+F+SVLWSGPLL IS++IL+NTLFSLC +IV+WK+AEL                
Sbjct: 108 YFDPRGLFMSVLWSGPLLVISMIILINTLFSLCYMIVRWKRAEL---------------- 151

Query: 390 XXXXXXXXXXXXXXXHRARTSRNKQD 313
                          HRAR +RNKQD
Sbjct: 152 --------------RHRARAARNKQD 163



 Score = 78.6 bits (192), Expect(2) = 2e-54
 Identities = 33/47 (70%), Positives = 42/47 (89%)
 Frame = -1

Query: 950 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAIDWK 810
           MEELK+ M EHMD M+DLV+K +++LR+GF+PA DNF+GFFHAIDWK
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWK 47


>ref|XP_003518332.1| PREDICTED: transmembrane protein 18-like [Glycine max]
          Length = 163

 Score =  157 bits (397), Expect(2) = 1e-53
 Identities = 79/146 (54%), Positives = 96/146 (65%)
 Frame = -3

Query: 750 EPWLIGLISFHVSLLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQN 571
           EPWL+GL+ FHV LLL+  ISRK  NFQM LFL++L GVY AE +N  L  NWK+F+ QN
Sbjct: 48  EPWLMGLLGFHVVLLLVAIISRKKTNFQMFLFLLTLAGVYLAESLNRFLGKNWKNFSSQN 107

Query: 570 YFDPHGVFVSVLWSGPLLCISILILMNTLFSLCQLIVKWKKAELXXXXXXXXXXXXXXXX 391
           YFDP G+F+SVLWSGPLL IS++IL+NTLFSLC +IV+WK+AEL                
Sbjct: 108 YFDPSGLFMSVLWSGPLLVISMIILINTLFSLCYMIVRWKRAEL---------------- 151

Query: 390 XXXXXXXXXXXXXXXHRARTSRNKQD 313
                          HRAR +RNKQD
Sbjct: 152 --------------RHRARAARNKQD 163



 Score = 79.7 bits (195), Expect(2) = 1e-53
 Identities = 33/47 (70%), Positives = 43/47 (91%)
 Frame = -1

Query: 950 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAIDWK 810
           MEEL++ M EHMD M+DLV+KF+++LR+GF+PA DNF+GFFHAIDWK
Sbjct: 1   MEELRSAMEEHMDLMADLVQKFSSDLRAGFRPAYDNFIGFFHAIDWK 47


>ref|XP_002526846.1| conserved hypothetical protein [Ricinus communis]
           gi|223533850|gb|EEF35581.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  166 bits (419), Expect(2) = 2e-53
 Identities = 85/146 (58%), Positives = 100/146 (68%)
 Frame = -3

Query: 750 EPWLIGLISFHVSLLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQN 571
           EPWL+GLI+FHV LLLL  ISRK+VNFQM LFL++L GVYFAE++N  L +NWKSFA QN
Sbjct: 48  EPWLMGLIAFHVMLLLLAIISRKHVNFQMCLFLLALGGVYFAERLNKVLGDNWKSFASQN 107

Query: 570 YFDPHGVFVSVLWSGPLLCISILILMNTLFSLCQLIVKWKKAELXXXXXXXXXXXXXXXX 391
           YFDP G+F+S LWSGPLL I+I+IL+NTLFSLC LIV+WK+AEL                
Sbjct: 108 YFDPQGLFLSALWSGPLLIIAIIILINTLFSLCYLIVRWKRAEL---------------- 151

Query: 390 XXXXXXXXXXXXXXXHRARTSRNKQD 313
                          HRAR S NKQD
Sbjct: 152 --------------RHRARLSHNKQD 163



 Score = 70.5 bits (171), Expect(2) = 2e-53
 Identities = 28/46 (60%), Positives = 39/46 (84%)
 Frame = -1

Query: 950 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAIDW 813
           M+EL++   +H +QM+DLV+K ++ELRSG +PA DNF+GFFHAIDW
Sbjct: 1   MDELRSAFEDHFEQMADLVQKLSSELRSGLRPAYDNFIGFFHAIDW 46


>ref|XP_002327230.1| predicted protein [Populus trichocarpa] gi|222835600|gb|EEE74035.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  156 bits (394), Expect(2) = 3e-53
 Identities = 68/104 (65%), Positives = 90/104 (86%)
 Frame = -3

Query: 750 EPWLIGLISFHVSLLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQN 571
           EPWL+GLI FH++LL+L  +SRK++NFQM  FL++L GVY +E++N  L +NW+SFA QN
Sbjct: 48  EPWLMGLIGFHLALLILTVVSRKHINFQMSFFLVALAGVYLSERLNRVLGDNWRSFASQN 107

Query: 570 YFDPHGVFVSVLWSGPLLCISILILMNTLFSLCQLIVKWKKAEL 439
           YFDPHG+F+SVLWSGPLL I+ +IL+NTLFSLC +IV+WK+AEL
Sbjct: 108 YFDPHGLFLSVLWSGPLLIIATIILINTLFSLCFMIVRWKRAEL 151



 Score = 79.7 bits (195), Expect(2) = 3e-53
 Identities = 33/46 (71%), Positives = 42/46 (91%)
 Frame = -1

Query: 950 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAIDW 813
           MEELK+ +  HMDQM+DLV+K ++ELRSGF+PA+DNF+GFFHAIDW
Sbjct: 1   MEELKSALEAHMDQMADLVQKLSSELRSGFRPAIDNFIGFFHAIDW 46


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