BLASTX nr result

ID: Coptis24_contig00008993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008993
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301546.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
emb|CBI37067.3| unnamed protein product [Vitis vinifera]              131   1e-28
ref|XP_002281797.1| PREDICTED: uncharacterized protein LOC100250...   131   1e-28
emb|CAN67130.1| hypothetical protein VITISV_040171 [Vitis vinifera]   131   1e-28
ref|XP_002320944.1| predicted protein [Populus trichocarpa] gi|2...   125   8e-27

>ref|XP_002301546.1| predicted protein [Populus trichocarpa] gi|222843272|gb|EEE80819.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  137 bits (345), Expect = 3e-30
 Identities = 69/99 (69%), Positives = 80/99 (80%), Gaps = 4/99 (4%)
 Frame = +2

Query: 266 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEE-VEKHYKILLED 442
           MD    + YGWSWEENKLFE+ALAVV+E++PDRW  VA MVGGR +EE V+KHY ILLED
Sbjct: 1   MDDLPKVLYGWSWEENKLFEMALAVVDEEDPDRWKVVAAMVGGRKSEEDVQKHYVILLED 60

Query: 443 LRYIESGYMDHTL-GEAQPCVPV--AQSLSWTDEDQKYV 550
           L+ IESG +DHTL GEAQPCV V  +QS+ WTDED KYV
Sbjct: 61  LQGIESGKLDHTLVGEAQPCVQVDCSQSVCWTDEDHKYV 99


>emb|CBI37067.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  131 bits (330), Expect = 1e-28
 Identities = 64/93 (68%), Positives = 73/93 (78%)
 Frame = +2

Query: 266 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEEVEKHYKILLEDL 445
           MD F ++   WSWEENK FELALAVV+E +PDRW  VA MVGG+SAEEVEKHY ILL+DL
Sbjct: 1   MDDFPNVLCEWSWEENKSFELALAVVDERDPDRWKVVAAMVGGKSAEEVEKHYVILLQDL 60

Query: 446 RYIESGYMDHTLGEAQPCVPVAQSLSWTDEDQK 544
           ++IESG MDH LGEAQPCV   Q   WTD+D K
Sbjct: 61  QFIESGEMDHKLGEAQPCV---QLECWTDQDHK 90


>ref|XP_002281797.1| PREDICTED: uncharacterized protein LOC100250300 [Vitis vinifera]
          Length = 98

 Score =  131 bits (330), Expect = 1e-28
 Identities = 64/93 (68%), Positives = 73/93 (78%)
 Frame = +2

Query: 266 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEEVEKHYKILLEDL 445
           MD F ++   WSWEENK FELALAVV+E +PDRW  VA MVGG+SAEEVEKHY ILL+DL
Sbjct: 1   MDDFPNVLCEWSWEENKSFELALAVVDERDPDRWKVVAAMVGGKSAEEVEKHYVILLQDL 60

Query: 446 RYIESGYMDHTLGEAQPCVPVAQSLSWTDEDQK 544
           ++IESG MDH LGEAQPCV   Q   WTD+D K
Sbjct: 61  QFIESGEMDHKLGEAQPCV---QLECWTDQDHK 90


>emb|CAN67130.1| hypothetical protein VITISV_040171 [Vitis vinifera]
          Length = 202

 Score =  131 bits (330), Expect = 1e-28
 Identities = 64/93 (68%), Positives = 73/93 (78%)
 Frame = +2

Query: 266 MDGFQDLFYGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEEVEKHYKILLEDL 445
           MD F ++   WSWEENK FELALAVV+E +PDRW  VA MVGG+SAEEVEKHY ILL+DL
Sbjct: 1   MDDFPNVLCEWSWEENKSFELALAVVDERDPDRWKVVAAMVGGKSAEEVEKHYVILLQDL 60

Query: 446 RYIESGYMDHTLGEAQPCVPVAQSLSWTDEDQK 544
           ++IESG MDH LGEAQPCV   Q   WTD+D K
Sbjct: 61  QFIESGEMDHKLGEAQPCV---QLECWTDQDHK 90


>ref|XP_002320944.1| predicted protein [Populus trichocarpa] gi|222861717|gb|EEE99259.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  125 bits (315), Expect = 8e-27
 Identities = 65/98 (66%), Positives = 78/98 (79%), Gaps = 4/98 (4%)
 Frame = +2

Query: 290 YGWSWEENKLFELALAVVEEDNPDRWNAVAMMVGGRSAEE-VEKHYKILLEDLRYIESGY 466
           YGWSWEENKLFE+ALAVV+E++PDRW  VA MVGG+ +EE V+KHY ILLEDL+ IESG 
Sbjct: 2   YGWSWEENKLFEMALAVVDEEDPDRWKVVAAMVGGKKSEEDVQKHYVILLEDLQGIESGK 61

Query: 467 MDHTL-GEAQPCVPV--AQSLSWTDEDQKYVALYLDCN 571
           +DH L GEAQPCV V   +S+ WTDED K + + LD N
Sbjct: 62  LDHKLVGEAQPCVQVDCTESVCWTDEDHK-LLVQLDIN 98


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