BLASTX nr result

ID: Coptis24_contig00008987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008987
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26526.1| unknown [Picea sitchensis]                             142   1e-31
gb|ADV57638.1| copper binding protein 3 [Gossypium hirsutum]          140   3e-31
gb|AFK43360.1| unknown [Medicago truncatula]                          139   9e-31
gb|ACJ83883.1| unknown [Medicago truncatula] gi|388522709|gb|AFK...   139   9e-31
ref|XP_002272263.1| PREDICTED: uclacyanin-2 [Vitis vinifera] gi|...   134   4e-29

>gb|ABK26526.1| unknown [Picea sitchensis]
          Length = 187

 Score =  142 bits (358), Expect = 1e-31
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = +1

Query: 145 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGSLHSVDEVNKADYDSCTSGNALQS 324
           DY VGD+  WN G DY TW SGKTF+VGD+L+F Y +LHSV EV+KADYD+C++ NA++S
Sbjct: 30  DYTVGDTQQWNLGVDYGTWASGKTFAVGDKLVFAYSALHSVMEVSKADYDACSTSNAIKS 89

Query: 325 YNGGNTMISLNKIGPVYFLCPTFGHCSGGMKLGVTVS 435
           YNGG+T ++L+  G  YF+C T GHCSGGMKLGVTV+
Sbjct: 90  YNGGSTTVTLDSAGAKYFVCGTAGHCSGGMKLGVTVA 126


>gb|ADV57638.1| copper binding protein 3 [Gossypium hirsutum]
          Length = 177

 Score =  140 bits (354), Expect = 3e-31
 Identities = 60/98 (61%), Positives = 78/98 (79%)
 Frame = +1

Query: 148 YIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGSLHSVDEVNKADYDSCTSGNALQSY 327
           Y VGDS+GW    DY +WV GKTF+VGD LLF YG  HSV+EV+K+DYD+C +GNA++SY
Sbjct: 22  YTVGDSSGWTTTGDYQSWVQGKTFTVGDTLLFTYGGSHSVEEVSKSDYDNCNTGNAIKSY 81

Query: 328 NGGNTMISLNKIGPVYFLCPTFGHCSGGMKLGVTVSAA 441
           + GNT+I+L+  G +YF+CPT GHC+GGMKL + V AA
Sbjct: 82  SDGNTVITLSNPGAMYFICPTIGHCAGGMKLAINVVAA 119


>gb|AFK43360.1| unknown [Medicago truncatula]
          Length = 199

 Score =  139 bits (350), Expect = 9e-31
 Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
 Frame = +1

Query: 145 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGSLHSVDEVNKADYDSCTSGNALQS 324
           D+ VGD+ GWN G DYT W SGKTF VGD L+F YGS H VDEV+++DY SCTS NA+++
Sbjct: 23  DFTVGDANGWNLGVDYTKWASGKTFKVGDNLVFKYGSSHQVDEVDESDYKSCTSSNAIKN 82

Query: 325 YNGGNTMISLNKIGPVYFLCPTFGHC--SGGMKLGVTVSAA 441
           Y GGN+ + L K G +YF+CPT GHC  +GGMKL V V AA
Sbjct: 83  YAGGNSKVPLTKAGKIYFICPTLGHCTSTGGMKLEVNVVAA 123


>gb|ACJ83883.1| unknown [Medicago truncatula] gi|388522709|gb|AFK49416.1| unknown
           [Medicago truncatula]
          Length = 199

 Score =  139 bits (350), Expect = 9e-31
 Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
 Frame = +1

Query: 145 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGSLHSVDEVNKADYDSCTSGNALQS 324
           D+ VGD+ GWN G DYT W SGKTF VGD L+F YGS H VDEV+++DY SCTS NA+++
Sbjct: 23  DFTVGDANGWNLGVDYTKWASGKTFKVGDNLVFKYGSSHQVDEVDESDYKSCTSSNAIKN 82

Query: 325 YNGGNTMISLNKIGPVYFLCPTFGHC--SGGMKLGVTVSAA 441
           Y GGN+ + L K G +YF+CPT GHC  +GGMKL V V AA
Sbjct: 83  YAGGNSKVPLTKAGKIYFICPTLGHCTSTGGMKLEVNVVAA 123


>ref|XP_002272263.1| PREDICTED: uclacyanin-2 [Vitis vinifera]
           gi|297734624|emb|CBI16675.3| unnamed protein product
           [Vitis vinifera]
          Length = 181

 Score =  134 bits (336), Expect = 4e-29
 Identities = 58/98 (59%), Positives = 74/98 (75%)
 Frame = +1

Query: 145 DYIVGDSAGWNQGTDYTTWVSGKTFSVGDRLLFNYGSLHSVDEVNKADYDSCTSGNALQS 324
           ++ VG S+GW+ G DY+TW SG+TF+VGD L+F YGS HSVDEV+K+ YDSC + N  +S
Sbjct: 21  NHTVGGSSGWDTGVDYSTWASGETFTVGDYLVFTYGSTHSVDEVSKSSYDSCATSNPTKS 80

Query: 325 YNGGNTMISLNKIGPVYFLCPTFGHCSGGMKLGVTVSA 438
           Y GG+  I+L   G +YFLCPT GHCS GMKL +TV A
Sbjct: 81  YTGGSNTIALTTAGSLYFLCPTTGHCSQGMKLAITVEA 118


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