BLASTX nr result
ID: Coptis24_contig00008962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008962
(624 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription ... 86 2e-21
ref|XP_002519300.1| calmodulin-binding transcription activator (... 73 8e-18
ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-15
gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Sola... 64 9e-14
ref|XP_004157104.1| PREDICTED: calmodulin-binding transcription ... 54 1e-12
>ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription activator 1 [Vitis
vinifera] gi|297736797|emb|CBI25998.3| unnamed protein
product [Vitis vinifera]
Length = 1018
Score = 85.9 bits (211), Expect(2) = 2e-21
Identities = 58/124 (46%), Positives = 73/124 (58%)
Frame = -2
Query: 602 YLAEADLTSLLFSLTLQENLMESVAATIXXXXXXXXXXXXXXVPPDGGDEWELSLKGSLA 423
YLAEA L+S L SL+ EN+M+SV+A I DG E +LSLKGSLA
Sbjct: 740 YLAEAHLSSHLCSLSPSENVMDSVSANIAAEKAAQTAVQNV----DGVIEEQLSLKGSLA 795
Query: 422 AVRKAGQAAFFIQTSLHARLFHYRLWGESSDEVFGIPPNLVALASLGSKTRKMGHFRYYL 243
A+RK+ AA IQ +L AR F R S+D++ +LVAL SL +K KMGHF+ YL
Sbjct: 796 ALRKSAHAAALIQAALRARSFRDRRLTRSNDDISEASLDLVALGSL-NKVSKMGHFKDYL 854
Query: 242 HGPA 231
H A
Sbjct: 855 HSAA 858
Score = 42.0 bits (97), Expect(2) = 2e-21
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -3
Query: 232 LKIQQIYRGWKGCRDFLKILNCIAKIQA 149
+KIQQ YRGWKG DFLKI + I KIQA
Sbjct: 859 VKIQQKYRGWKGREDFLKIRSRIVKIQA 886
>ref|XP_002519300.1| calmodulin-binding transcription activator (camta), plants, putative
[Ricinus communis] gi|223541615|gb|EEF43164.1|
calmodulin-binding transcription activator (camta),
plants, putative [Ricinus communis]
Length = 999
Score = 72.8 bits (177), Expect(2) = 8e-18
Identities = 51/124 (41%), Positives = 67/124 (54%)
Frame = -2
Query: 602 YLAEADLTSLLFSLTLQENLMESVAATIXXXXXXXXXXXXXXVPPDGGDEWELSLKGSLA 423
YLAEA LT L SL + EN SV ATI +P +G + +LSLKGSLA
Sbjct: 732 YLAEAFLTRQLSSLNINENATNSVDATIAAEQATELAAALVALPSNGRVDDQLSLKGSLA 791
Query: 422 AVRKAGQAAFFIQTSLHARLFHYRLWGESSDEVFGIPPNLVALASLGSKTRKMGHFRYYL 243
AVRK+ AA IQ + + F YR + +D+ + +L AL SL +K ++ HF YL
Sbjct: 792 AVRKSALAAALIQATFRSYSFQYRQLPKGTDD-SEVSLDLAALGSL-NKDQRSRHFEDYL 849
Query: 242 HGPA 231
H A
Sbjct: 850 HSAA 853
Score = 43.1 bits (100), Expect(2) = 8e-18
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3
Query: 232 LKIQQIYRGWKGCRDFLKILNCIAKIQA 149
+KIQQ YRGWKG ++FLKI N I KIQA
Sbjct: 854 VKIQQKYRGWKGRKEFLKIRNRIVKIQA 881
>ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|222865111|gb|EEF02242.1|
predicted protein [Populus trichocarpa]
Length = 933
Score = 63.2 bits (152), Expect(2) = 2e-15
Identities = 48/125 (38%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = -2
Query: 602 YLAEADLTSLLFSLTLQENLMESVAATIXXXXXXXXXXXXXXVPPDGGDEWEL-SLKGSL 426
YLAEA L+ L SL + +N M+ A + + G E+EL SLKGSL
Sbjct: 682 YLAEAFLSRHLSSLKIDQNEMDHDTAAMAAEKETDIAAQVASLSSKG--EYELLSLKGSL 739
Query: 425 AAVRKAGQAAFFIQTSLHARLFHYRLWGESSDEVFGIPPNLVALASLGSKTRKMGHFRYY 246
AAVRK+ +A I + F R +SSD++ I +L AL SL R+ GHF Y
Sbjct: 740 AAVRKSARAVALIHAAYRTSSFRQRQLAKSSDDISEISLDLAALGSLNMVQRR-GHFEDY 798
Query: 245 LHGPA 231
LH A
Sbjct: 799 LHSAA 803
Score = 44.7 bits (104), Expect(2) = 2e-15
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -3
Query: 232 LKIQQIYRGWKGCRDFLKILNCIAKIQA 149
+KIQQ YRGWKG +DFLKI N I KIQA
Sbjct: 804 VKIQQKYRGWKGRKDFLKIRNRIVKIQA 831
>gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Solanum lycopersicum]
Length = 939
Score = 63.5 bits (153), Expect(2) = 9e-14
Identities = 46/126 (36%), Positives = 67/126 (53%)
Frame = -2
Query: 602 YLAEADLTSLLFSLTLQENLMESVAATIXXXXXXXXXXXXXXVPPDGGDEWELSLKGSLA 423
YLAE+DLTS L +N ++++ A + P +G + ++SLK SLA
Sbjct: 673 YLAESDLTSHHQLLATSKNALDTIGAGLEAEKVYESAVQEIV-PLNGTIDDDVSLKASLA 731
Query: 422 AVRKAGQAAFFIQTSLHARLFHYRLWGESSDEVFGIPPNLVALASLGSKTRKMGHFRYYL 243
++RK+ AA IQ + AR F R ES ++V +LVAL SL +K +K+ F YL
Sbjct: 732 SLRKSAHAAALIQAAFRARSFRQRQLRESRNDVSEASLDLVALGSL-NKVQKVNCFEDYL 790
Query: 242 HGPAEN 225
H A N
Sbjct: 791 HSAAIN 796
Score = 38.5 bits (88), Expect(2) = 9e-14
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -3
Query: 232 LKIQQIYRGWKGCRDFLKILNCIAKIQACI 143
+ IQQ Y GWKG R+FLK+ N I K+QA +
Sbjct: 795 INIQQKYCGWKGRREFLKVHNQIVKMQALV 824
>ref|XP_004157104.1| PREDICTED: calmodulin-binding transcription activator 2-like [Cucumis
sativus]
Length = 989
Score = 53.9 bits (128), Expect(2) = 1e-12
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = -2
Query: 602 YLAEADLTSLLFSLTLQENLMESVAATIXXXXXXXXXXXXXXVPPDGGDEWELSLKGSLA 423
YLAEADLT+ +LT EN +++ P ++ LSLKGSLA
Sbjct: 713 YLAEADLTAHSCTLTDGENFKDNIKENANIDEAIEPADVV---PSQLAEDELLSLKGSLA 769
Query: 422 AVRKAGQAAFFIQTSLHARLF-HYRLWGESSDEVFGIPPNLVALASLGSKTRKMGHFRYY 246
AVRK+ AA I + AR F H +L + P+LVAL L +K K+ H+ Y
Sbjct: 770 AVRKSVNAAALIHAAFRARSFRHKQLMENDKGMIHEGSPDLVALGIL-NKAEKI-HYEDY 827
Query: 245 LH 240
LH
Sbjct: 828 LH 829
Score = 44.3 bits (103), Expect(2) = 1e-12
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -3
Query: 232 LKIQQIYRGWKGCRDFLKILNCIAKIQA 149
L+IQQ YRGWKG R+FLKI N I KIQA
Sbjct: 833 LRIQQNYRGWKGRREFLKIRNRIVKIQA 860