BLASTX nr result

ID: Coptis24_contig00008957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008957
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83754.1| hypothetical protein VITISV_032967 [Vitis vinifera]    78   8e-13
ref|XP_003634803.1| PREDICTED: putative disease resistance prote...    73   2e-11
ref|XP_003634795.1| PREDICTED: putative disease resistance prote...    73   3e-11
ref|XP_002265285.2| PREDICTED: putative disease resistance prote...    72   5e-11
ref|XP_003564434.1| PREDICTED: putative disease resistance prote...    72   5e-11

>emb|CAN83754.1| hypothetical protein VITISV_032967 [Vitis vinifera]
          Length = 1109

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
 Frame = +1

Query: 1   LKLLNHIQGALRIEGLEQ----AADSKRAELKNKEKLRSLVLLFSEERQDEKRKRIESVL 168
           LK LN+++G LRI  LE+    A +SK A LK K  L+SL L +     ++  +  E V+
Sbjct: 624 LKCLNNLRGGLRIRNLERVKGGALESKEANLKEKHYLQSLTLEWEWGEANQNGEDGEFVM 683

Query: 169 DGLQPHTNLAELDIEGYEGNKFPSWMSSNTALPNL 273
           +GLQPH NL EL I+GY G +FPSWMSS   LP+L
Sbjct: 684 EGLQPHPNLKELYIKGYGGVRFPSWMSS--MLPSL 716


>ref|XP_003634803.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1192

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1   LKLLNHIQGALRIEGLEQAAD----SKRAELKNKEKLRSLVLLFSEERQDEKRKRIESVL 168
           LK LN+++G L I+GLE   D    S+ A L  K+ ++SL L +      +  + +ESVL
Sbjct: 673 LKELNNLRGGLWIQGLENVRDVVLESREANLGGKQHIQSLRLNWRRSGA-QSSEDVESVL 731

Query: 169 DGLQPHTNLAELDIEGYEGNKFPSWMSS---NTALPNL 273
           +GLQPH NL +L IEGY G +FPSWM +   ++ LPNL
Sbjct: 732 EGLQPHRNLKKLCIEGYGGIRFPSWMMNGGLSSMLPNL 769


>ref|XP_003634795.1| PREDICTED: putative disease resistance protein RGA1-like [Vitis
           vinifera]
          Length = 1274

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/92 (47%), Positives = 57/92 (61%)
 Frame = +1

Query: 1   LKLLNHIQGALRIEGLEQAADSKRAELKNKEKLRSLVLLFSEERQDEKRKRIESVLDGLQ 180
           LK LN ++G L I+ L+ A  S+   LK KE L SL L +++E   +     E V+ GLQ
Sbjct: 690 LKRLNQLRGGLLIKNLQNARVSEGEILKEKECLESLRLEWAQEGNCDVDD--ELVMKGLQ 747

Query: 181 PHTNLAELDIEGYEGNKFPSWMSSNTALPNLV 276
           PH NL EL I GY G +FPSWM  N+ LPNL+
Sbjct: 748 PHRNLKELYIGGYRGERFPSWM-MNSLLPNLI 778


>ref|XP_002265285.2| PREDICTED: putative disease resistance protein RGA1-like [Vitis
           vinifera]
          Length = 1467

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
 Frame = +1

Query: 1   LKLLNHIQGALRIEGLEQAADSK----RAELKNKEKLRSLVLLFSEERQDEKRKRIESVL 168
           LK+LN+++G L IE LE   D+K     A L  K+ + SL L +S  ++++  +  ESV+
Sbjct: 673 LKMLNNLRGELWIEKLENVMDAKVESREANLVEKQYIESLGLEWSYGQEEQSGEDAESVM 732

Query: 169 DGLQPHTNLAELDIEGYEGNKFPSWMSS---NTALPNL 273
            GLQPH NL +L I GY G  FP WM +   +T LPNL
Sbjct: 733 VGLQPHRNLKDLFIIGYGGKGFPRWMMNGELSTMLPNL 770


>ref|XP_003564434.1| PREDICTED: putative disease resistance protein RGA3-like
           [Brachypodium distachyon]
          Length = 1111

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = +1

Query: 1   LKLLNHIQGALRIEGLEQAADSKRA---ELKNKEKLRSLVLLFSEERQDEKRKRIESVLD 171
           L+ ++ +QG L I GL   AD + A   +L+ KE LR+L L++ E+ +     + E VL+
Sbjct: 680 LRNMDQLQGKLSIRGLNNVADEQDAICAKLEAKEHLRALHLIWDEDCKLNPSDQQEKVLE 739

Query: 172 GLQPHTNLAELDIEGYEGNKFPSWMSSNTALPNL 273
           GLQP+ +L EL ++G++G +FPSW+ S + LPNL
Sbjct: 740 GLQPYLDLKELTVKGFQGKRFPSWLCS-SFLPNL 772


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